Hirundo rustica (Barn swallow): 120755613
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Entry
120755613 CDS
T09369
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04110
Cell cycle
hrt04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120755613 (SMC3)
04114 Oocyte meiosis
120755613 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120755613 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hrt00535
]
120755613 (SMC3)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120755613 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
120755613 (SMC3)
Proteoglycans [BR:
hrt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120755613 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120755613
NCBI-ProteinID:
XP_039926753
LinkDB
All DBs
Position
8:26246868..26271128
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctccaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccggagcag
aggctggctttgttgcatgaagggacaggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattccgacaacaggttgccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagattgaagttactgaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaggagagcatttcactaatgaaa
gaaacagagggcaagcgagagaagatcaacgagttgttgaaatacattgaagagcgactg
catactctagaagaggagaaagaagagctggcacaataccagaaatgggataaaatgagg
agagcattagaatacaccatttataatcaggaacttaatgaaacccgagctaagcttgat
gagctttctgctaaacgagagacaagtggagaaaaatcgaggcaactgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaattgaagacaaag
atttctgcaatgaaagaagagaaagagcaactgagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaggctaaagatctgcaggatgaattggctggcaacagt
gagcagaggaaaagactgctaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggcagaaacagagccaaaatttaacagcgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaagaaagaacagatctttatgcaaagcaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagagctgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaagagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagtgaaagaaattacctatggagagaagagaatgcagaacag
caagctcttgctgcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggaatcgtgatgaataacttt
gaatgtgaaccagcattctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagcacaaagatcctgatggaatttaacaaaatgaac
cttcctggagaagtcactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgagatacaatccaagatttgat
aaagctttcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcacaatggattgtatcactctggaaggtgatcaagtcagccat
cgaggtgctttgactggaggttattatgacaccaggaagtctcggcttgaactgcaaaaa
gatgttagaaaagcagaagaagaacttggtgaactcgaagcaaagctcaatgaaaactta
cgtagaaacattgaaaggattaataatgagatcgaccagttgatgaaccaaatgcagcaa
attgaaacacaacaaagaaagttcaaagcctctcgggacagtattttgtcagagatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgccaaagcaacgtagcttg
cagagcctggaggcaagtttacatgctatggagtccactagagaatcattaaaagcagaa
ctggggacagatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacagctacagcaagaaaacagacagcttttgaatgagaggattaaa
ttggaaggcattatcacaagagttgaaacatatctcaatgagaatctgagaaaacgctta
gaccaagtggaacaagaactgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacctcagaacttgaggctatcaacaaacgagtgaaggatacgctggcacggtca
gacgatctggataactctattgacaaaacagaagcgggaattaaagaacttcagaagagc
atggaacgctggaagaacatggaaaaagagcatatggatgccattaaccacgatacaaaa
gaacttgaaaaaatgacaaataggcaaggcatgcttctcaagaagaaagaggaatgcatg
aagaaaataagagagctgggttcacttccacaggaggcttttgagaagtatcagacttta
agtttaaagcagctattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatccatcatggagctcatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtctcaaaaaatttc
agtgaagtattccagaagttagtacctggtggtaaggccacattagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagcaccgagagcgaaagggga
tctggatctcagagcagcgttccatctgtagatcagttcactggagttggcataagggta
tcattcacagggaagcagggtgagatgagagaaatgcaacaactttcaggtggacagaag
tctttagtggccctggccctaatatttgccatccagaaatgtgatccagctccgttttac
ttgtttgatgaaatcgaccaagccttggatgcccagcatagaaaagctgtgtcagatatg
attatggaactggctgaacatgctcagtttattacaacaacttttaggccggagctgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggtcagtcacattgatgtg
atcacagcagaaatggccaaagactttgtagaagacgacaccacgcatggttaa
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