KEGG   Hirundo rustica (Barn swallow): 120755669
Entry
120755669         CDS       T09369                                 
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120755669 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hrt04990]
    120755669 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:hrt04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   120755669 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 120755669
NCBI-ProteinID: XP_039926927
LinkDB
Position
8:16157198..16200952
AA seq 327 aa
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTESKVWSPLVSEEGKTHPYKMNLASEPQEIRHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSTVETKTSPGALEPSKPLDQHN
QTPGNIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVVPPEGYEVVTVFPK
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacgcaccttgaggcacaaaacaaaatcaagggttgcactgatgaactgactctgaca
gtcagcagaacggagtcaaaagtctggtcaccactcgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacaggaaataaggcacataggaagtgcgcac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccggcaggcctctactcctcagagaacatccagaccttcaacagcacg
gtggagacaaaaacatcaccgggggccctggagcctagcaagcctttagatcagcataac
cagaccccaggcaacattgccatagacaaacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctaccaaaccatctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcgcagaagctgcccatgtgcgacaag
tgtggatctggcattgtagggatgttcgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgcggcaccaatctcaagcagaaaggacacttctttgtggaa
gaccaaatctactgcgagaagcacgcgcgggaacgggtggttcccccggagggctacgag
gtggtcaccgtcttcccaaagtaa

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