Hirundo rustica (Barn swallow): 120755669
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Entry
120755669 CDS
T09369
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120755669 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120755669 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120755669 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120755669
NCBI-ProteinID:
XP_039926927
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All DBs
Position
8:16157198..16200952
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AA seq
327 aa
AA seq
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MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTESKVWSPLVSEEGKTHPYKMNLASEPQEIRHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSTVETKTSPGALEPSKPLDQHN
QTPGNIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVVPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacgcaccttgaggcacaaaacaaaatcaagggttgcactgatgaactgactctgaca
gtcagcagaacggagtcaaaagtctggtcaccactcgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacaggaaataaggcacataggaagtgcgcac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccggcaggcctctactcctcagagaacatccagaccttcaacagcacg
gtggagacaaaaacatcaccgggggccctggagcctagcaagcctttagatcagcataac
cagaccccaggcaacattgccatagacaaacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctaccaaaccatctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcgcagaagctgcccatgtgcgacaag
tgtggatctggcattgtagggatgttcgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgcggcaccaatctcaagcagaaaggacacttctttgtggaa
gaccaaatctactgcgagaagcacgcgcgggaacgggtggttcccccggagggctacgag
gtggtcaccgtcttcccaaagtaa
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