Hirundo rustica (Barn swallow): 120755680
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Entry
120755680 CDS
T09369
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120755680 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120755680 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hrt02044
]
120755680 (SEC31B)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120755680 (SEC31B)
Secretion system [BR:
hrt02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120755680 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
TPR_Sec16
MIOS_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
120755680
NCBI-ProteinID:
XP_039926945
LinkDB
All DBs
Position
8:17229843..17266260
Genome browser
AA seq
1221 aa
AA seq
DB search
MKLKEIERTAVQAWSPANNHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQK
GVLPASNRFHKLIWGNFGNGSAESSGVIIGGGDNGVLTMYSVHHILISKGDPVLGQTEKH
SGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDNRILCWNPSMGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNNLDPFGT
GQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQ
ESRTKLLKLLGYSKEDLQKKIASCLSNGIPDKQPLPEAGDTNAAPDQLLMNSSDDVAAVS
SSSAFFDNLIPQNMSTLEIPVTQDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIA
GGDKLLKETQKRYFAKQKTNLSVLLSSIVQQNWQDIVCMCDLQSWKEALAILLTYSKHED
YAQLCDMLGARLESEGDAALSNDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKV
MVLSRSIEMLQGTAAPAPGPVLAERITQYANLLASQGCLAAAMNYLPSSSKELLIEQLRD
RLFHAQGENVGDQQPPPFPYAHVNVGVIKPTAAKGSSTLEGAAHKAGSRHPEKPNYQSSF
APSAPSQPSVPSLFTPQPVPAMSVTPHHVAPPQASTGPQASLYSRGHPYPQYNLGLNPAT
VSGPAVSQSQPFGPVGVRPVGPAPFSSQPSLPGQSIPVGVQAPMTSPGVPPPRPALFTPA
SVPSSQLPAACPLPVANQSPLDFSSAPFNCPMNMGYPQGGPGAPSTKPLPAAIPPPPTGF
FPWLDPHTDHAAQESWSDPSTGRGGLQKKKLPEKFTPLAPITAPVMGLPAEPQGMHPQLS
RLQESGQSPPGAPKEGSLQYHQLPGESIEKKELPPEHQALKTTFEGLVQRCSAVATDPKT
RRKLEDALQRLECLYEKLREQALSPTILMGLHEIARCIEAKNYPQGLLVHTQVVSSSSFS
EVSGFMPILKVLMTIAGKLNV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagaaatcgagcgaacggctgtgcaggcatggagtccggcaaacaaccac
cctatttacctagcaacaggaacatctgcccagcaactggatgcatccttcagtacaaat
gcaaccttggaaatatttgaggttgacttcagggatccctccctggacatgaagcagaaa
ggtgtacttcctgcctcaaacaggtttcataagctgatctgggggaactttggaaatggg
tctgcagagtcctctggagtgatcattggtggaggggataatggggtcctgacaatgtac
agtgtgcaccacatcttgatttcaaagggcgaccctgtccttgggcagacagagaagcat
tcaggtcccgttcgagcccttgacttcaacccttttcagagtaatctcttggcttctgga
gccaatgattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactcca
gggactaaatcacagcctcatgaggacatcagcgtggtgtcctggaatcggcaggtgcag
catatcctgtcctccgctcaccccagcggcaaggctgtggtttgggacctcaggaagaac
gagcccatcatcaaagtcagtgaccacagcaacaggatgcattgctcaggaatggcctgg
catccagaagttgcaacccagctagtcctttcctctgaggatgaccgtttgccagtgatc
caaatatgggacttacgctttgctacctctcctcttagccagctggaagggcacacaagg
ggagttctctcagtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaa
gataaccggatcttgtgctggaacccaagtatgggggaggtggtgtacgagttgcccatt
cggagtcagtggtgctttgatgtccagtggtgtccgaggaatccttcagtcttctctgct
gccacttttgatggatggatcaacatttattctgttatgggtgggaacttagaagctcag
cagaagacacaggctgacaagatctcttcctccttcaacaacctggatccctttggcaca
ggtcagagccttcctccactgcaggtgccagagcaagtaactcagaccaccttgattcca
ccattaaaaaagccacccaagtggattcgcagacctgtgggggtttcatttgcatttgga
ggaaaactgattacctttggtcttaccaaagctcctggacagcaaatgcagcagacttat
ccacatcaggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaaa
gaactgcagatggccttgcagtcggggaacctccttgattactgccagggcaagatccag
acagccaagttgccatttgatgagaacctttggaacttcttgaaggtgaatttggagcag
gagtccaggactaaacttctcaagctgctgggctacagtaaagaggatctgcaaaaaaag
attgcctcatgtttgagtaatgggatcccagataaacagccccttcctgaggcaggtgat
acaaatgctgcaccagatcagcttttgatgaattccagcgatgatgtagctgctgtttct
tcctcttcagcattttttgataacctcatcccacaaaatatgagcacattggagattcct
gtcacacaagatacagatggactcatcagccaagcccttttgttggggaattttgagggt
gcagtggagctgtgcatgcgagcagagcgctttgctgatgccatcatcttagctatagct
ggtggggataagctcctaaaggaaacccagaagcgctattttgccaagcagaaaacaaat
ctctctgtgctgctttcctccattgtgcagcagaactggcaagatattgtttgcatgtgt
gatctacagagctggaaggaggcactagccatcttgttaacatactcaaagcacgaagac
tacgctcagctctgtgacatgctgggtgcccgcctggagtcagagggagatgcagccctg
tccaatgacgcctgcctctgctatatctcatcaggcaatgtggagaggctggtggaatgc
tgggtaaaaaaccatgagacttcctcaccacttgccttacaggatcttatagagaaggtg
atggtgctgagcaggtccattgagatgctccaaggcacagcagcaccagcaccaggccct
gtcttggcagaacgaatcacccagtatgccaatctcctggcatcacaaggatgcttggca
gccgcaatgaattacctacccagcagctctaaagagctcctgattgaacagctccgagac
cggctctttcacgctcaaggagagaatgtgggtgatcagcagccgcccccttttccctac
gctcatgtcaatgtaggggtcattaaacccacggcagccaagggtagttccacccttgaa
ggagcagcccacaaagcaggttccagacatccagagaagcccaactatcagtcgtcattt
gccccttcagcaccatctcagccttcagtgccttccctcttcacacctcagccagtgcca
gcaatgtctgtgacacctcaccacgttgcccctccccaggccagcacgggtccacaagcg
agtctctattccagagggcacccatatccacagtacaacttgggcttgaatccagcaact
gtctcagggccagctgtgtcacagtctcagccatttggaccagtgggagtcagacctgtt
ggtcctgctcccttctccagccagccctctctgccaggacagtccatacctgttggagtg
caagcacctatgacgtctcctggtgttccaccacccagacctgccctcttcactccagcc
tcagtcccatcatctcagcttcctgcagcttgtcctctcccagtggcaaaccagtctcct
ctagacttctcttcagcacctttcaactgccccatgaacatgggttatcctcagggaggt
cctggagctccatctactaaaccactgccagcagccattcctcctcctcccacaggtttc
ttcccttggctagatcctcacacggatcatgcagctcaggaatcttggagtgatccctct
actggaagaggaggccttcaaaagaaaaagttgcctgagaaatttactcctctggccccc
atcaccgctccagtaatgggcctgcctgctgaaccccaagggatgcatcctcagctgtcc
aggttgcaagaatctggccagtcacccccaggagcacccaaggaaggcagcctacagtat
caccagctacctggggaaagcattgagaagaaggagctgccccctgagcaccaggctttg
aagactacattcgaagggttggtgcaacgctgctcggctgttgccactgatccaaaaacg
cgaaggaagctggaggatgcgttgcagcggctggagtgtttgtatgagaagctccgtgag
caggcgctctctccaaccatcctcatgggtctccatgaaattgcccgatgcattgaggct
aagaactatccacaaggtctcctggttcacacccaagttgtcagcagcagcagtttcagt
gaggtgtctggtttcatgcccatcctgaaagtcctcatgaccatagcaggcaaactgaat
gtgtaa
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integrated database retrieval system
