Hirundo rustica (Barn swallow): 120755717
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Entry
120755717 CDS
T09369
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120755717 (BTAF1)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120755717 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
120755717
NCBI-ProteinID:
XP_039927047
LinkDB
All DBs
Position
8:complement(20650428..20694139)
Genome browser
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPNEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VLLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVANVVINQPATDSKTWVENAQEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECTTVAICIQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DAHIDVGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKVLQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLVQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSHENSKGPNSDKDGMQHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRTNIHINNFDRKSLLEKGDAPAQELVNSL
QVFETTAASMDTQLHPLLIQHLPHLYMCLQHPSTAVRHMASRCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTNSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYEIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISLNEETEKPKLKSTG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAQNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctctttattttactggacaccggtacaacaccagta
acaagaaaagcagctgcacagcaacttggggaagtagtgaaactgcatcctcatgaactg
aataatctcttatctaaagtgttagtgtatttgagaagtacgaattgggatactcggatt
gcggctggccaggctgtcgaagcaatagtgaaaaacgtacctgagtggaatccaactcct
agatcaaaacaagaaccaggctcagaaagtcctaatgaagattcaccttcaacagatcgg
ttgcgttttgacagattcgatatatgtcggttgttaaaacatggggcgtctcttcttgga
tctgctggtgcagaatttgaagtccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcacgacaaaggaaactgctgcaaaagaaacttggcttagatatgggtgctgca
attggaatgaatactgaggatctgttcaatgatgaagatttggactattctccttcttca
gttttactagtaaacaaacaacctactcttcaggctgctgagttaattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggctaagctatttgca
aagcaaagatccagagatgcagtggaagctaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaaaagaagaaaagttgcaaatgttgtcatcaaccagcctgccacagac
tcaaaaacatgggtagaaaatgctcaggaagaggcaaatgaatggcctctggaaagcttt
tgtgaagaggtgtgcaatgatctctttaacccttcatgggaggttcgacatggtgcaggt
actggactgagagagatacttaaagctcatggtaaaagtggtggtaaaatgggagatagc
tctttagaggagatgattcagcagcatcaggagtggctagaagacttggttattagactt
ctttgtgtgtttgcactggacagatttggagactttgtttcagatgaagtagtggcacca
gtacgtgagacctgtgctcagactttgggagtggtattgaaacacatgaacgaaactggt
gttcataaaactgtggatgttctcctgaagctgcttacacaggaacagtgggaagtgaga
catggtggtctcctaggaataaagtatgctttggcagtacgtcaggacatgatcaacact
ttattgcctaaagtgctgcctgcaataattgaaggtctgcaagatctggatgatgatgtc
agagctgttgctgcagcatctttagtaccagtagtggaaagcctggtccaacttcaatct
cagaaggtgccttttattcttaataccttgtgggatgcacttctggagttggatgacttg
acagcttccacaaacagtatcatgatccttctttcgtcccttctgacttaccctcaggtc
cgcaaatgcagcattcagcagtccctgacagttttggtgccacgtgtgtggccattcttg
catcacacgatatcatctgtgcgaaaagcagctctggaaacgttattcacactgttgtct
acccaagaccagagttcttcaacatggctgactccaattctgcaagacatgttgaggcac
atatttcagttttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggtg
tggctggaactgttaaacaaggcatctgtacagtatgttgttgcagctgcttgtccatgg
atgggagcctggctctgcttaatgatgcagccatctcacttgcccattgacttaaacatg
ttgctagaagtaaaaaccaggtccaaagaaaaagcaggcgctaaactgcgtcaaggtcaa
acccagaataaggaggtgattcaggaatacattgctggagcagacagcattgcagaagat
ccagcaaccagggattacgtcgtcatgcgtgctcggatgatggcagcaaagttgctggga
gcactttgttgctgcatttgtgacccaggtgtaaatactgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaaatctgccttgcagagg
attagtgttgcgttagtaatctgtgagtgggcagccttgcaaaaggagtgtacaactgtg
gctatttgtattcaacctcgtttacttggggtcctttctgaacatctctattacgatgaa
attgccgttccttttacacgaatgcaaaatgagtgtaaacaactcatctcattgctagct
gatgcacacattgatgttggaaacagagtaaactgcagtgtatttacaatagatcaagct
aatgagctggttacttctgttttcaatgaggtgacatcatcctttactttgaatcctaag
gttctgcaacagttggacagtaaaaggcaacaagtccaaatgactgttacagaaacaaat
caagaatggcaagtgttgcatctgcgagtccatacctttgctgcctgtgcagtggtgaac
ttgcagcaacttccagaaaaactgaatcccgttataaaacccttaatggaagcgatcaaa
aaagaagagaatacactagtacaaaactatgtggcttcatgtatagccaagttacttcag
cagtgtacaacaaggtctccttgtcccaactcgaagattataaaaaacctctgcaactct
ctgtgtgtggatccacatcttaccccactggcagcatgtcctgcacagcctcagagtagc
catgaaaactcaaaagggcccaactctgataaagatgggatgcagcacacagttactaag
cacaggggaataattacactgtacagacatcagaaagctgcttttgccatcacaagtcgg
cgaggtcctactccaaaagctccaaaagcccctattgcagatctccccacaggcagcagt
ggaagcattcctacagaactcgatgaggctcagaaaccttacgttgtacagagaagagga
gctgaatttgccttatctactatagctaaacattttggtgctgaaatggcaacaggattg
ccacatctctgggatgctatggttggttcgttaaggaccaacattcacataaataatttt
gaccgaaagtcattactggaaaaaggagatgctccagctcaggagctggtgaattccttg
caggtttttgaaacaacagcagcttcgatggatactcagctacatcctctgttaatacag
catttgcctcatctttacatgtgccttcaacatcccagcactgctgtgagacacatggct
tcccgttgtgtgggtgttatgagcaaaatagcaaccatggaaacaatgaatatcttccta
gagaaagtcctaccctggctgggagcaatagatgacaacaccaaacaagagggtgcaatt
gaagcacttgcatgtgtaatggagcagctggatgttggaattgttccatacattgttctt
ctagtggttccagttctgggtagaatgagtgatcagaccaacagtgtacgttttatggcc
actcagtgctttgccacgctgatcagactgatgcccctggaggctggtataccagaccca
ccaaacatgtctgaagaattaatcagaatgaaggctaaagaacgtcactttctggaacaa
ttactggatgggaaaaaactggaaaactatgaaattccagtaccaatcaaagcagagctg
agaaaataccaacaggatggagtgaactggcttgcatttctcaataaatacaaacttcat
ggaattctttgtgatgacatgggcttaggaaaaactttacaatccatttgcattcttgcg
ggtgatcattgcctcagggctcaggaatatgcaagaacaaaactggtggacagtgttcct
cttccctccttggtggtgtgtcctcctacactcacaggacactgggtggatgaagtgggc
aaattttgctcgaaagaatatcttaatcccttgcactatacaggacctcctactgagaga
gcaagattgcaacaccaggtgaaaagacataacctcatagtggcttcatatgatgtcgta
agaaatgacattgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaagctgtcaaaagcagtaaaacaactgactgctaat
tacaggatcattctttctgggacaccaatccagaacaacgtcttagagctgtggtcattg
tttgacttcctaatgccaggattcttgggcactgaacgccagtttgcagctcgttacggc
aaaccaatcctggctagcagagatgcccgaagctccagtcgagaacaagaggctggggta
ctcgcaatggaagctctgcaccgccaagtcctgccgttcctgctgaggagaatgaaagag
gatgtgctgcaagatcttccaccgaaaattattcaagattattactgtattctcagtcct
ctacaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
acagtttcttcaatttcactgaatgaagaaactgaaaaaccaaagcttaaatctacaggt
catgtatttcaggcattgcagtacttacggaagctctgcaaccatccagctttagtgctc
acaacgcaacatccagaatacaagagaattacagagcaacttgcagctcagaattcatcc
cttcgggatatccaacatgcacctaagctgtctgctttaaaacaactgctgctagactgt
ggtttggggaatggtggatcttcagaaagtggtacagaagctgttgtggcccagcacaga
gtacttatcttctgtcagctgaagagtatgctggatatagtggagcacgaccttctcaga
cctcagttgccttcagttacttacttacgactcgatggcagcattcctgctgggcagaga
cattccattgtttcccggtttaataatgacccgtctatagatgttcttctgctcaccact
catgttggtgggctgggacttaacttgacaggagctgacacagttgtatttgtggaacat
gactggaacccaatgagagacctgcaagccatggatcgagcacatcgcattgggcagaaa
cgtgttgttaatgtgtatcgcctgatcacccggggaactctggaagagaagatcatgggt
cttcaaaagttcaaaatgaatattgcaaatacagtgatcagccaagaaaatgcaagcctg
cagagcatgggaacagagcagcttcttgatctgttcactcttgacaaggatggcaaaact
gaaaaagcagatacctctacctcttctgggaaagcatcaatgaaatcagtactcgaaaac
cttggagaactatgggatcaagagcagtacgacactgaatacagtcttgaaaactttatg
cattcattaaagtaa
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integrated database retrieval system
