Hirundo rustica (Barn swallow): 120755831
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Entry
120755831 CDS
T09369
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03020
RNA polymerase
hrt04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120755831 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120755831 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120755831 (POLR3A)
Enzymes [BR:
hrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120755831 (POLR3A)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120755831 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
120755831
NCBI-ProteinID:
XP_039927308
LinkDB
All DBs
Position
8:12868380..12900408
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKSLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCCIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSTFLQSFETAIEYNKEVEPLLGRAQENLNPLVVLNLFKRIPVEDIPLLLM
NPQAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKVKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHVDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLIFD
HNEFHIPIVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacggatgtggccaagaaaataagccacatctgtttt
ggcatgaaatctcccgaagagatgcgtcagcaagctcacattcaagtggtcagtaaaaat
ttgtatagtcaggacaaccatcactctccgctgcagtatggagtgctggaccatcgcatg
ggaaccagtgaaaaagaccgtccctgcgaaacctgtgggaaaagtctggctgattgttta
gggcattatgggtacattgacttagagctaccatgttttcatgttgggtacttcaaagct
gtgataggcatcttacagatgatttgcaaaacttgttgctgcatcatgctgtcagtggaa
gaaaaaaagcaatttttagattacctaaaacgacctggccttacctatcttcagaagaga
gggctgaaaaagaaagtgtctgagaagtgccgaaagaaaaacacatgtccttactgtggg
gcctttaatggaactgtgaagaagtgtggtttgttgaaaataatacatgaaaagtacaag
acaaataagaaagtcgtagatccagtagtatctacttttctccagtcctttgaaactgcc
attgaatataacaaagaagtagaacccttactgggaagagctcaggaaaacttgaatcct
ctggtagtattgaacctctttaaaagaatcccagtggaagacatccctctgcttctaatg
aacccacaagcaggaaaaccttcagatttgatcctcacacgactcctggtgcctccactg
tgtatcagaccctctgttgtgagcgatttgaagtctggcaccaatgaggacgatttgaca
atgaaactgacagagatcattttcctcaatgatgtgataaaaaagcataggatatcagga
gccaaaacacagatgattatggaagactgggattttcttcagctgcaatgtgccctgtac
attaatagtgagctctctggaatacccctcaacatggcacctaaaaaatggaccagaggt
tttgttcagaggcttaaaggaaagcaaggtcggtttagaggcaatctgtctggaaagaga
gtggatttttctggcagaacagtcatttcacctgatcctaacttaagaatagatgaagta
gcagtgcctattcatgttgctaaaatattgacctttcctgaaaaggtgaacaaagcaaat
attaattttatgaggaaacttgtctgtaatggtcctgatgttcatcctggagcaaacttc
atacagcaaagacacacccagatgaaaagatttttgaaatatgggaacagagagaagatg
gcccaggagctgaagtttggtgatatcgtggagcgacatctgatagatggtgacatcgtc
ctgttcaaccggcagccctccctgcacaagctgagcatcatggctcacattgctagagta
aaacctcataggactttcaggttcaatgaatgtgtctgtacaccgtacaatgcagacttc
gatggagatgagatgaaccttcaccttcctcagacagaagaggcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaagaaatggagaacctcttattgct
gctattcaagattttctcacaggtgcctatcttcttacattgaaagataccttttttgat
cgagccaaagcctgtcaaattattgcttctatcctggttggcaaggatgaaaaggttaaa
gttcgtcttccacccccagcaattctgaagcctgtaacactctggactgggaaacaagtt
ttcagcctcattctcaaacccagcgatgattgtcctgtaaaagccaaccttcgaacaaag
ggcaaacagtattgtggcaaaggggaggacctgtgttacaatgattcttatgttacaatt
caaaacagtgagttaatgagtggcagtatggacaaaggaactctggggtcaggatccaag
aacaacatcttctacatcttgctgagagactggggccaggtcgaagctgcggatgccatg
tcacgtctggccagacttgctccggtctatctttctaatcgtggcttttcaattggaatt
ggtgatgtaacccctgggcagggcctgctaaaagccaagtatgagctgctgaatgctggc
tataagaaatgcgatgagtatattgaagctctgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacactagaggccttaatccttaaagaactgtctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtcccctgatcatg
gctctctgtggttccaaaggctccttcattaacatatcccagatgattgcttgtgtaggg
cagcaggctatcagtgggtcccgtgttcctgatgggtttgagaacaggtccttgcctcac
tttgagaagcattccaagctccctgcagccaaaggctttgttgcgaacagcttctattct
gggttgactcccactgaattttttttccacacaatggctggtcgagaaggtctggttgat
acagctgtaaaaacagctgaaactgggtatatgcagagacgtctggtaaaatcccttgaa
gatctttgctcacagtatgatttaacagtcagaagttctactggtgacattatacagttt
atttatggaggagatggcttggatcctgcagctatggaagggaaagatgaaccactggaa
tttaagcgagttctagacaatatcagggctgtctatccgtgccgaagtgaaccagccctg
agcaaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgaatttctttgc
tgccgagacagttttctgcaggaaatcaaaaaattcatcaaaggtgtttctgagaagata
aaaaaaactagggacaagtatggaattaatgacaatggcacaacagagccaagagtttta
tatcagttggacaggattactccaacacaattagagaagtttctggagacttgcagagac
aaatacatgagggcacagatggagcctggttctgcagtaggagctctttgtgcacagagt
attggtgagcctggcacacagatgactctgaagactttccattttgctggtgttgcttca
atgaacattactttgggtgtaccaagaatcaaagaaatcattaatgcttcaaaggctatt
agcacccctattataacagcacagttggacaaagatgatgatcctgattttgcccgtctg
gttaaaggaaggattgagaaaactttgttaggagagatttctgaatatattgaggaagtg
tttcttccagatgactgtttcatcctagtgaagctgtctttagagcgcattagactacta
agattagaggtgaacgcagagactgtgcgctactcaatttgcatctctaaactcagagtg
aagcctggggatgttgctgtccatggagaagcagttgtatgtgtgacccctcgtgaaaat
agcaagagttccatgtattatgtattgcagtccctcaaggaagagctaccaaaggttgta
gtgcaaggcataccagaagtttctcgagctgtcattcatgttgatgaacaaagtggaaag
gaaaaatacaaacttctggttgaaggtgataacctacgagctgttatggctactcatgga
gtgaaaggaacaaaaacttcctctaacaacacttacgaggtagagaaaactctgggaatt
gaagctgctcggacgaccattatcaatgagattcagtatacaatggtgaaccatggcatg
agcattgacaggagacatgttatgttattgtctgatctaatgacttacaagggtgaagtg
ctgggcattacgaggtttggactggcaaaaatgaaggaaagtgtgttgatgttggcttct
tttgaaaagactgcagaccatctctttgatgctgcctactttggacagaaggattctgtt
tgtggtgtttctgagtgcatcatcatgggaattccaatgaatattggaacaggacttttt
aaactgttacacaaagcagacaaagaatcaacccctcccaggcggcctctgatatttgat
cataatgaatttcatattcccattgttacatag
DBGET
integrated database retrieval system
