Hirundo rustica (Barn swallow): 120756006
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Entry
120756006 CDS
T09369
Symbol
BMS1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120756006 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120756006 (BMS1)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
GTPase
120756006 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA
nSTAND3
AAA_16
RNA_helicase
Gly_acyl_tr_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
120756006
NCBI-ProteinID:
XP_039927591
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Position
8:complement(11658820..11680846)
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AA seq
1314 aa
AA seq
DB search
MEEKEKKKHRAKHSGPKAEKKRKRYLNDLGIGDEENARKRNPKAFTVQSAVRMARTFHRT
QDLKTKKHHIPMVDRTPLEPPPVVVVVVGPPKVGKSTVIKCLIKNFTRQKLVEIRGPVTI
VSGKKRRLTIIECGCDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
GVLTHLDTFKNNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQKQEIHNLGRFIS
VMKFRPLTWQTSHPYVLADRMEELTNPEDVRINPKCDRKISLYGYLRGAHLKNKSQIHMP
GVGDFTVSDVSFLPDPCALPEQQKKRSLNEKEKLVYAPLSGVGGIVYDKDAVYIDLGGSH
AHEKEEEEVRPNHELVQSLISTHSAIDVKMASSKVSLFMDSTPLGSEDVGQEFVMPKEER
QVDLKTGRVRRKAVFEDDEKENDDVASEEEDDQEEEDEEEAVSEDGSDGDDENDAEEESE
RVLLREGMAVRRAKHLKTEVAQEEAVNELPAFADSDDDLEMSSTEEGETAPEDSEMEDDE
EEEEEGDIQRTCEDESSDSEFEAANKRAESKQCDMNSERTETKSQISEHSPKRKAVLTTD
SGNCTGEEASESEDESSSLEEGDDEGGSHEELEAEESNRNGFRHSQAKKADSVRQTKVRT
VDIEDDDVENLLREEEEYEEKIDLSADTTGALKWKEDLTQKAAEAFLRQQRSTPNLRKLV
YGTAVEDEDQEGEDADDELGGLFRVSRPDKASKEKANALDCSKFLVEKPQDWDLEEVMSS
IRDCFVTGKWEDDKDAAKLLEEDEELYGDFEDLETGVVHKGKAAVGGEQSGSEEEEEDEK
MSKPEPEEEEKKKERMDKKRKLKEMFDAEYDEGDATYFDDLKEEMHRQAQLNRAEFEDQD
DETRVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQLRLKKHR
WYKKILKTRDPLILSLGWRRFQTIPMFYMEDHNGRHRLLKYTPQHMHCGAAFWGPITPQG
TGFLAVQSVSGTTPDFRIAATGVVLDLDKSITIVKKLKLTGFPFKIFKNTCFIKGMFNSQ
LEVAKFEGAAIRSVSGIRGQIKKALRAPVGAFRATFEDKLLMSDIVFVRTWYPVSIPTFY
NPVTSLLKPAGEKDSWSGMKTTGQLRYERGIKLKQNKDSLYKPIVREKRHFNKLHIPKAL
QKALPFKNKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLSALSTVNNYKMRKAKVKHR
EQLKEYLKVKQKEDEQKFKRQKEAKKKVYRILGQREKKRQKSSLKGSSKGEKSM
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagagaagaagaagcatcgtgcaaagcatagcgggccgaaggcagagaag
aaaaggaaacgttatctcaatgacctggggataggagatgaggagaatgcacggaagaga
aaccccaaagcttttacagtccagtccgctgtgcggatggccaggactttccatcgaact
caggatctgaagactaaaaagcatcacattcccatggttgaccggactcctctggagcca
cctcccgtggtggtggttgtggttggccctcccaaggtcgggaagagcactgtgataaag
tgtctcattaagaacttcaccaggcaaaagctggttgaaatccggggtcctgttacaatt
gtttcaggtaaaaaacgccggctgaccattattgaatgtggatgtgacattaacaccatg
attgacctggctaaagttgctgatttggttctaatgctcattgatgccagctttggattt
gagatggagacgtttgaattcctgaacatttgccaggtacatggctttcccaaaattatg
ggagttctaacccacttggacacattcaagaacaacaaacaattaaagaagactaagaag
aggttaaaacacagattctggactgaagtgtatccgggtgctaagttgttttatttgtct
gggatggttcatggagaatatcaaaagcaggaaattcacaatttgggccgttttatctcg
gttatgaaattccggcctctcacttggcaaacgtctcacccgtatgttcttgcagacaga
atggaagagctgacaaacccagaggatgttcgaatcaatcccaaatgtgacaggaagata
tcactgtatggatacctgagaggagcacacctgaaaaacaaaagtcaaattcatatgcca
ggtgtaggagacttcactgtaagtgatgtgagtttcctgccagacccctgtgctctccct
gagcagcagaagaagcgttccttaaatgagaaagagaagctcgtctacgcccctctttca
ggagtcgggggaattgtgtatgacaaagatgctgtttacattgaccttggtggaagccat
gctcatgaaaaggaagaggaggaagtgaggccaaatcatgaacttgttcagagcctcatc
tccacacactcagccattgatgttaagatggcatcaagcaaggtctctctcttcatggac
tctacacccttgggttcagaagatgtaggacaagagtttgtgatgccaaaagaagagagg
caggtggatttgaagactggaagagttcgtcggaaggctgtatttgaagatgatgagaag
gaaaatgatgatgtagcaagtgaggaggaagatgaccaagaagaagaagatgaggaagaa
gcagtgtctgaagatggaagtgatggtgatgatgaaaatgatgctgaggaagaaagtgag
agagtgctgttacgggaagggatggcagttaggagagccaagcacctgaaaacagaggtg
gctcaggaagaagctgtgaatgagctaccagcatttgcagacagcgatgatgatctggag
atgagctctacagaagaaggagaaactgcccctgaagacagtgagatggaggatgatgag
gaggaagaggaggagggggacatacaaaggacttgcgaagatgaaagctcagatagtgaa
ttcgaggccgcaaataaaagagctgaatctaagcagtgtgatatgaatagtgaacgtaca
gaaacaaaatcccaaatctcagagcacagtcccaaaagaaaagcagtgctcaccacagat
tcaggaaactgcactggggaagaggcatcagaatctgaggatgagagctcttcccttgaa
gagggtgatgatgaaggaggatcacatgaagaactagaagctgaagagtcaaataggaat
ggatttcgccatagtcaagcaaagaaagctgatagtgttagacagactaaagttagaacg
gtagatattgaggatgatgatgtggagaatctgctgagagaggaagaggagtatgaagaa
aaaatagatctttctgctgacacaacaggtgcacttaaatggaaagaggacctcacacag
aaggcagctgaggcctttctaagacagcagcgatcaacccccaatcttcgcaaacttgta
tatggaacagctgtcgaggatgaggaccaggagggcgaggatgcagatgatgaacttgga
ggtttgtttcgtgtcagccgtccagacaaagcatccaaagagaaggctaatgctctcgac
tgctccaaattcctggtagaaaagccgcaagattgggatttagaagaggttatgagcagt
atccgagactgctttgttactggaaagtgggaggatgataaagacgcagcaaagctgttg
gaggaagatgaagagctgtatggagattttgaagatctggaaactggggttgtgcacaaa
ggaaaggctgctgttggaggagagcagtctggaagtgaagaagaggaggaagatgaaaaa
atgtccaaaccagaacctgaggaggaggaaaagaaaaaggagcgcatggacaagaaaaga
aaacttaaagaaatgtttgatgcagaatatgatgaaggggatgccacatactttgatgat
cttaaagaagaaatgcatagacaagcacagctcaatcgagcggaatttgaagatcaagat
gatgagaccagagtgcagtatgaaggattcaggcctgggatgtatgttcggatagagatt
gagaatgtgccctgtgaatttgtcctgaattttgatcctcattatcccatcatcctgggt
ggtctaggcaacagcgaaggaaatgtcggctatgtacagctgcgcctgaagaagcaccgg
tggtacaagaagatcctgaagacacgcgatcccctgatcctgtcgctgggctggaggcgc
tttcagaccatccccatgttctacatggaggaccacaacgggcggcaccggctgctgaag
tacaccccgcagcacatgcactgcggggccgccttctgggggcccatcactcctcagggg
acagggtttttggcagttcagtctgtcagtggcacaacgcctgacttccggattgctgcg
acaggagttgtgctcgatttagataaatccataactattgtaaagaaattaaagctaacc
ggttttccattcaaaatttttaagaacacttgttttattaagggaatgttcaactctcag
ttggaagtggctaaatttgaaggcgcagcgatccgtagtgtgagcggtatccgagggcag
atcaaaaaggccctcagagctcctgtgggtgctttcagagcaacatttgaagacaagctg
ctgatgagtgatattgttttcgtgaggacttggtatcctgtttctatcccaacattttat
aaccccgtaacatccttgctgaagccagcaggtgagaaagatagttggagtgggatgaag
accacaggccagctgaggtatgagcgaggcatcaaactgaaacaaaacaaggattctctc
tataagcctattgtgagggagaagaggcatttcaataagctccacattcctaaagcactg
cagaaggcactgccttttaagaacaaacctaagaatcttgagaagaaaggcaagactcca
aaagaccagtggagaccagctgttatcagggagcctcatgaaaagaagatatcggctcta
ctcagtgctttgagtacagtgaataattacaagatgaggaaagccaaagtaaagcatcgg
gaacagcttaaagaatatctcaaagttaagcagaaggaggatgaacagaaattcaagagg
caaaaggaggctaagaaaaaagtctatcgcatactgggacaaagggagaaaaagaggcag
aagtcaagcttgaaaggatctagtaagggggagaagagtatgtaa
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