Hirundo rustica (Barn swallow): 120756031
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Entry
120756031 CDS
T09369
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03430
Mismatch repair
hrt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120756031 (MLH1)
03460 Fanconi anemia pathway
120756031 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120756031 (MLH1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120756031 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120756031
NCBI-ProteinID:
XP_039927631
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Position
1:107859420..107877904
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AA seq
746 aa
AA seq
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MAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKGPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPSEEYAKILEVVSRY
AIHNSGISFSVKKQGDTISDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSTEVVKSA
ANSSVVTKGTSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSSGLTEVTAEVNAESADRPQ
DAEMEEVSDLVEITDVQEHIVKPGGLSESGHLSPETIPSRKRPREDMDIELEKDDSSKDL
TAACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLHEHSFVGCVSPQWALAQYQTKLYLL
NTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAEY
IVEFLKKKTEMLKDYFSLEIDEEGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEK
ECFESLSKELAMFYSIRKQYIIEESNPTNSQNEDSESGSTTWKWTVEHVLYKAFRTHLLP
PKHFAEDGNILQLANLPDLYKVFERC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgatccggcggctggatgaagccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatcgagaactgtttggatgctaaa
tctacgagtatccaggtagtagttaaagaaggtggtctgaagttcatccaggttcaagat
aatggctgtggtatcagaaaggaagacttggacattgtatgtgagagatttactacgagt
aaactgcaaaaatttgaagacttagctagtatttctacatatggttttaggggcgaggcc
ttggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaaggtcctccgaagccctgtgct
ggaaaccagggaactcagatcacagttgaagatctcttttacaatgtaaatacaaggagg
aaggctttaaagaatccaagtgaagaatatgcaaaaatactagaagttgttagcaggtat
gccatccacaactcaggcatcagcttttcagttaaaaagcaaggtgacaccatatcagat
gttagaaccttgtccaacgcttccacagtggacaacattagggccatctttggaaacgct
gttagcagggaactcatagaagtgggctgtgaagatgcaaatctggcctttaaaatgaaa
ggttacatcacgaatgcaaactactctgtgaagaaatgtatatttttactcttcataaac
catcggttggtagagtcagccgctatgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacttaagcctggaaatagctccccagaatgta
gatgtgaatgtgcatcctacaaaacacgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacaacatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggagctgactgctcttccactgaggttgtaaaatcagca
gcaaactcttctgtggttaccaagggaaccagtgataaagtttatgcacatcagatggtc
cgcactgactcccgagagcagaaattggatgcttttcttcagccagtgaacaacccccta
agttcaggcctcactgaagtaacagcagaggttaatgcagagagtgcagacaggccccag
gatgctgaaatggaagaagtcagtgacctggttgaaataactgatgttcaggagcatata
gtgaagcctggagggctgagtgagagtggacacttgtctcctgagactataccttctcgg
aagagaccacgggaagacatggacatagaattggagaaagatgacagcagcaaggacttg
actgctgcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctccag
gaggaaatcagtaaccaggcacatgcaaaacttcaggagatgctacatgagcactcattt
gttggttgtgtcagtcctcagtgggctctggcccagtaccagacaaaactgtacctcctc
aatacaacaaaactcagccaagaactcttctaccagatacttatttatgacttcgcaaac
tttggagtcttaaggttgtctgagccagctcctttatatgagctttcaatgcttgcttta
gaggatcctgaaagtggctggacagaagaagatggcccgaaagaagggcttgctgaatac
attgtggagtttctgaaaaagaagactgaaatgttgaaagattatttctctcttgaaatt
gatgaggaaggaaatcttactgggttaccacttctgatagacaactatgtcccacccttg
gaaggactgcctatgtttatcctacgcttggccacagaggtaaactgggatgaagagaaa
gagtgttttgaaagcctgagtaaagaactagccatgttctactccatcagaaagcagtac
ataatagaggaatccaacccaacaaactctcagaatgaagattctgagtctggttcaaca
acatggaaatggactgtggaacatgtgctttacaaagcttttaggactcatcttttacct
cctaaacactttgcagaagatggcaacattttgcagcttgctaatctgcctgacttgtat
aaagtttttgaaagatgttga
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