Hirundo rustica (Barn swallow): 120756050
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Entry
120756050 CDS
T09369
Symbol
DHX32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120756050 (DHX32)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120756050 (DHX32)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120756050 (DHX32)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
120756050
NCBI-ProteinID:
XP_039927675
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All DBs
Position
8:complement(33106462..33127612)
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AA seq
748 aa
AA seq
DB search
MEFLTFSPENHCISESLDGSDGDEEEILVCGEDLELNPFDGLPYSSRYYRLMKEREELPI
WKEKCTFMESLLHNQIVIVSGDAKTGKSSQVPQWCAEHCLALRPRGAVVCTQVLRQAAVA
LALRVADQMDVNLGHEVGYSVPFESCCTPETILRYCTDEVLQREMMSTPLLNCYSVIVLD
DVHERTVATDALLGLLRAVLAARAELRLVLLTAPHACSTLQRFCGGVPVIRARGTHRAQA
VFSCSAHREPFLSALRLLLEIHHAREKGDIVIFLACEQEIEKAYQMIRQEQSNLNPDLGK
LIPIPLYPTKQDPTPKLTQDKQKHGKKYRRKVLLTTSSGESLIWTKNLTFVIDVGVETRK
VYNPRIRADSVLTQPISQSQAEVHKQILGMSPSGKIFCLYPEEFTHREMKAEIPAKVQES
NLTSLVLFLKRMDIAGFSHCDFISSPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEF
PLDPQLSKSLLASCEFECVDEMLTIAAMVTAPSCFLHAAPGTEDIARTRWHRFSHPAGDH
FTLINVFNAFKAAPASPTQPDFSSENWCRDNFLSCSALSMAEVIRAELVEIMKRIELPIS
RADFGSEENLLSIKKALLSGYFMHIARDVDGSGNYLMLTHKQVAQLHPFSSYYNTRRIPE
WVLFHEFSISEGNSIRVVSEISPHLFAELVPQYYFSNLPPSESKDILQEVINHLAPVSAT
KEEQKTANDSKENEEFPQTPTEQRCVIQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttaaccttttctccagagaaccactgcatttcagaatcactcgacggcagc
gacggggatgaagaggaaatacttgtctgtggagaagatttagagcttaatccttttgat
ggcttgccttactcctcccgttattacaggctgatgaaagagagagaagagcttccaata
tggaaagaaaaatgtactttcatggaaagtttgcttcataatcaaattgtgattgtgtca
ggagatgcaaagactggcaagagctcccaggtgccgcagtggtgtgccgagcactgcctg
gccctgcggccccgcggggccgtggtgtgcacgcaggtgctccgccaggccgccgtggcg
ctggccctgcgcgtggccgaccagatggacgtcaacctgggccacgaggtcggctactcc
gtgcccttcgagagctgctgcacgcccgaaaccatcctgaggtactgcacagatgaggtg
ctccagagggagatgatgtccacgcccctcctgaactgctacagcgtcattgtcttggac
gacgtgcacgaaaggaccgtggccacagacgccctgcttggcctcctgagagctgtcctg
gcagccagagcggagctgaggctggtgctgctcactgccccccacgcctgcagcaccctg
cagcggttctgcggcggcgtgcccgtgatccgagcgcggggcacgcaccgcgcccaggcc
gtcttctcctgcagcgcccacagggagcccttcctgtctgccctgaggctgctcctggag
atccaccacgccagggagaagggggacatcgtcatcttcctggcgtgtgagcaggaaatt
gaaaaagcttatcagatgatcaggcaggaacaatccaatttaaaccctgaccttggaaaa
ctcatccccattcctttataccccaccaaacaagacccgactcccaaactaacccaagac
aagcagaaacatggcaaaaaatacaggaggaaagtgctgctcaccaccagctctggagaa
tctctgatctggactaaaaacctgacttttgtcatcgatgtcggtgtggagacaagaaag
gtgtacaatcctagaatcagagcagactctgttctaacccagcctatcagccaaagtcaa
gcagaggtgcataaacaaattctgggcatgtctccatcagggaaaatcttctgcttgtat
cctgaagaatttacgcacagggaaatgaaggcagaaatcccagctaaagttcaggaatcc
aacctcaccagcttggtcctgttcctgaagaggatggacatcgcaggtttttcacactgt
gacttcatcagcagcccagctcctgaaagcctgatgcaggctttggaagatctggattat
ctggcagcgctggataacgacggaaacctctctgaatttgggattatcatgtcagaattc
cccctggatcctcagctgtccaagtcactgctggcttcgtgtgaatttgagtgtgtggat
gagatgctcaccattgcagccatggtcacagctcccagctgcttcctgcacgccgctcct
ggcaccgaggacatcgctcggacgcgctggcaccgcttctcccacccggcaggagatcac
ttcaccctcatcaacgtcttcaacgccttcaaggcagcccctgccagccccacacagcca
gacttcagcagtgagaactggtgccgtgataatttcctgagctgctctgctctgagcatg
gcagaggtgatcagagccgagctggtggagatcatgaagcgcattgaacttcccatttca
cgagcagactttggatcagaagaaaatctactgagcattaagaaagctcttttatctggt
tacttcatgcatattgctcgtgatgtggatggctcagggaactacttaatgctgacacac
aaacaagtggcccagctccatcccttctcatcctattacaacaccaggaggattccagag
tgggttttattccacgagttcagcatctcagagggcaattccatccgagttgtctccgag
atctccccccatctatttgcagagctggttcctcagtattatttcagcaatcttcctcca
agtgaaagcaaggatattctgcaggaagtgatcaatcacttggcacctgtttcagccaca
aaggaggaacagaaaactgccaatgacagcaaagaaaatgaggaatttccccaaactccc
actgagcagagatgtgttattcagtga
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