Hirundo rustica (Barn swallow): 120756086
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Entry
120756086 CDS
T09369
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120756086 (ZSWIM8)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120756086 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
120756086
NCBI-ProteinID:
XP_039927739
LinkDB
All DBs
Position
8:complement(15562700..15621907)
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AA seq
1820 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCTESACEAGRSQAQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDAGVYFSEG
PEPPVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGIEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMIIYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
STQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGAR
AASEAARGVADSRVTSEPTAVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTQGL
HPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAPSLA
ATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSSQP
NSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT
EDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTPAF
HQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKR
SKQTKELWQRVSLEMTTFSP
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggagaaagcaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaagtttatcctccagtgcctgaacaactgcaacttcgaatcgccttc
tggagtttcccagaaaatgaggaggatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagacccactc
cagataggtttccatctgagcgccactgtggtgcccccacagatggtgccccccaagggc
gcctacaacgtggcggtgatgtttgaccggtgccggatcacatcgtgcagctgcacctgc
ggtgccggggccaagtggtgtgctcacgtcgtggcgctctgcctcttccgcatccacaac
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggctacaaagagac
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacagcagattcttccaaca
gctcagcgcttgctggacgagttgttatcttctcagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaacccttcacaaattctgtggaccctctcct
gttgttttcagtgatgtgaattccatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgagggagagaaccggaaggaatctggaacttg
ctttccatcgtgcgggagatgtttaagaggcgggatagcaacgcggctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataacgggctggtggtacagtgtgcga
acatccgcgtcgcacagcagcgctagcgggcacacgggacgcagcaatggccagtcagaa
gtggctgctcacgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtcctcgatccaactatcagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactccttctgttgggtaaag
gccatccagcagaggagttgccggttgcagtgcacagaaagtgcctgtgaggctggtagg
agccaggcccaggagcccgggggaccgtgtctgcagcccggggacaggctgcggccctct
ccccaggagccagctgttcgtcccaaagaacttactggaaagcggaaagttgtctctgaa
acgccacagagggttctgagacggctctcggcagaaggggataaagctgtctataagact
gcagtgagcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagtgaggacagctctctggagccagacttggcagagatgagcctggat
gacagcagcttggcgctgggggcagaagccagcaacacctttagttttacagaaagtccg
ttgagcaggagctacagggacgcctttgaggaggatgctggagtgtacttctctgaggga
cctgagccccctgtcaggagcagttccatggccaagaaatcccccaaggatcctgtgggg
gagatgggtagcggcgacgacgacctgccttccgcggatgagaactctggtggtgtgagt
ctcaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtgtattatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaaggaggaattgaagaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggcgctgtatgcacatggatac
agtaatgaggcttgccgcttgactgtagaacttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaaccagcaag
cagacgtggatggcaaccaacaccttgtctaaagctgctttcttgctgactgtcttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctctaccaaggctctggaggtgaagctggcttatcaagaatctgagatt
gcagccctattgaagaagattcccttgggcaccaatgagatgaacactattcgaggaaga
gctgaagaactgcgagaagggacattgtgcgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctccagaccc
ccaagccgtaattggaataatgaaatgcctggagatgaagagcttggttttgaggcagct
gttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggggatctggctctagccctgatgattatttacaaggatgat
cagtccaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaa
ccacagacactgagttccttctactcatccagcaagcctacagttgcaaatcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttctgtc
acacagcaagctgctgtaagcactgcagtccagagcagtcctgagaactttgtggagaag
agtacacaggagagctctcagaggtccccatgtgagccagctgcagaggccactgttttg
aaacaagagggaaaggtgcccagtcgtctggcccttgggaaccgaggtggatacaatggg
agatgctggggttcacctgtgaggcagaagaagaaacacacaggcatggccagtattgac
agcagtgctcctgaaacaacctctgacagttctccaacgctcagtcggcgtcccctacgt
gggggctgggcaacaacatcctggggcagaggacaagatagtgacagcatcagcagttct
tcaagtgattcgctgggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtac
gcgctagggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccac
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcccccagaggtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccacgccctgaacccaaacgagatccagagggctctggtgcagtgtaaggaacag
gacaacctgatgctggaaaaggcctgcatggcagtagaagaggcggccaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttacgaacagact
gttggcggcaccccggcgcagagagaaggtgccaccggctgcagcgccggtggcgcgcgg
gccgcgtctgaagcggcgcgtggcgtggcagacagccgcgtgacctcggagccgaccgcg
gtgacggtggcggccgcggtaactgcggcagccaccgtcatgccggtgatctctgtgggg
tcgaccatgtaccagcagcacacggtggcagggccagcaatggcgcacacgcagggtctc
cacccttacaccacccttcagactcacatcccctgcaatccccagtatatcggacacact
atccagcacatgccgcgcccagctgtcttcccggtccctggctcggcgtatccgcagggt
gtccatccagcattcataggggctcagtacccttactcagtaacagcaccgtcactggca
gctacagctgtgtccttccctggcgtgcccgtcccctccatgacgcagattgcggtgcat
ccttatcacagcgagacgggactgtcgctgtcttccaatgtagcgctaggcagtgtccat
gcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctcacagccc
aactcccttgttacagggggttttcctgctgaagatgagcagcacagtcagcctgtgagc
ccccagggtctgcactacctccactctgcataccgagttgggatgctggcactggagatg
cttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccctacact
gaggatgtaaaatggctcctggggttagctgcaaagttaggtgtcaactacgtgcatcag
ttttgtgttggtgcagccaagggggtgctgagcccttttgtgcttcaggagatcatcatg
gaagctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcaccccagccttc
caccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcaccggctgatc
catctcactccagctgactacgatgactttgtgaatgccatccgcagcgccagaagcgcc
ttctgcctgactcccatgggcatgatgcagttcaatgacatcctccagaacctaaagcgc
agcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttctcgcca
tga
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