Hirundo rustica (Barn swallow): 120756175
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Entry
120756175 CDS
T09369
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120756175 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120756175 (SEC24C)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120756175 (SEC24C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
120756175
NCBI-ProteinID:
XP_039927996
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All DBs
Position
8:complement(15672840..15710097)
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AA seq
1171 aa
AA seq
DB search
MSVNQQAHAGPPYGQPQPGYQGYQQPAYGGQSLPGVPQSQYGAYNGPMPGYQQPVPPQGY
FPSLGFPSKGSPVSLNSDTSSLAPNFIGSLRAPPTSGAPPPASGASHPSGHLAYSQFEHG
DVQNGIPASAAPMQRPPAPQPFLPGSAPTPVSQISTFQQYGPPPGSVQQLRNHMAGMTIG
GTAASAPPPAGLGYVSGSFSATGSGLHTPYSASQGPPPASVSEGLPLAQPPFPGHTVSTQ
RLPTQVPAFTPPPPSTGVAPSSYPPTTGAPRPPAMPGPPLPGQTVPAPPSSQPNHVSSPP
PPPPPSTMAGLHPGPPMSGLHGPPPPTHPPQPGYQMQQNGSFGQMRGPQPNYGGAYPGAP
NYGSPPGPPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNRGSE
PFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLA
ALPPEETLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPHYFQH
LDHTGKRVDYYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLI
CEELKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPL
LDGFLVNVNESRTVIASLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFH
TSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQY
LDVATLGVVPYQTGGSIYKYAYFQLETDQYRFLNDLRRDVQKEVGFDAVMRVRTSTGIRA
TDFFGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLR
IHNLSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKTVRDALINQCAQILACYR
KNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEATTDDRAYIRQLVTSMDVAET
NVFFYPRLLPLTKADVDSDSLPAAIRNSEERLSKGDIYLLENGLNIFVWVGVSVQQSLIQ
NLFGVSSFSQISNALSTLPVLENPFSKKVRSIVDMLQGQRSRYMKLIIVKQEDKLEMLFK
HFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaccagcaagctcacgcggggcctccttacgggcaacctcagcctggatat
cagggataccagcagcctgcctacggaggacagtccctgccaggggttcctcagtcgcag
tatggagcttataacgggcccatgccaggatatcaacagccagtccctccacaaggttac
tttccttccttggggtttccttcgaagggctctcctgtatctctcaactctgacacttct
tctcttgcacctaatttcataggttcattgagagccccaccaacatctggagctccccct
ccagcctctggagcatctcatccttctggccacttggcatacagtcagtttgagcatgga
gatgtgcagaatggaattccagcctcagcagccccgatgcagaggccacctgcacctcag
ccgtttctgccaggctcagcacccacgcctgtcagccagatatctacgttccagcaatat
gggccccccccaggcagcgtgcagcagctcaggaatcacatggcagggatgacaattggt
gggactgcagcctctgctcctcccccagctggactgggctatgtctcaggaagctttagt
gcaacaggatctggtcttcacacaccttacagtgcaagccaaggaccccctcctgccagt
gtttctgagggtcttcctttggcacagcctccgtttcctggtcacacagtatcaactcag
cgcctgcctactcaagttcctgcttttaccccgcctcctccttctacaggggttgcacct
tcctcttaccctcctaccacaggtgctccaaggccacctgccatgccaggcccacctctg
cctgggcagacagttcctgcaccaccatcatcccagcctaatcatgtatcctcaccacca
cctccaccacctccatcaactatggcggggctgcaccctgggcctcccatgagtggtctc
catggaccacctcctcccactcatcctcctcagccaggataccaaatgcagcagaatggt
tcctttggacagatgaggggtccccagccaaactatggaggagcctatccaggagcacca
aattatggaagtccacctggaccaccacctccaccaaaacgtttggatccagattccatt
cctagccctcaacttaatgagctgccaccccagcagaaacccaggcacagaatagaccca
gatgcaatccctagtccaattcaagtgattgaagatgacagaaataaccgtgggtcagag
ccatttgtcactggagtgagagggcaggtcccacctcttgttactacaaatttcttggtc
aaggatcaaggtaatgcgagcccccgctacatcagatgcacatcttacaatatcccctgc
acctctgacatggccaaacagtcccaagttcccctggctgccgtcatcaagccgctggct
gctctgccgccggaggagacccttccttatttggtagaccacggagaatccggtcctgtc
cgatgtaataggtgcaaagcttacatgtgcccttttatgcaattcattgaaggtggaagg
aggttccagtgttgtttctgcagctgtgtcactgaggtgccacctcactacttccaacat
ttggatcatactggaaagcgagtagattactatgaccgacctgagttatcactgggctcg
tacgagtttctagcaacagttgactactgcaagaataacaagtttcctagtccacctgct
ttcatttttatgattgatgtgtcttacaatgctgtgaagagtggcttagtaaggctaata
tgtgaagaattaaagtcgctcctagattatctgcccagggaagggaacatggaggagtca
gccattcgagtaggctttgtcacctacaacaaggtgttgcacttctataacgtgaagagc
tcgctggcacagccgcagatgatggtggtctcagatgtggcagatatgtttgtgccgctc
ctcgatggctttctggtgaatgtgaatgagtccaggacagttattgccagtttgctggat
cagattccagaaatgtttgcagacacgagagaaacagaaactgtttttgcacctgtgatt
caagcagggctggaggcactgaaggcagctgagtgtgctggcaagctcttcattttccac
acctctctgcccattgcagaggctccagggaagttaaagaacagggatgataggaaactg
atcaacacagataaggagaagactttgtttcaaccacagacaagcttttacaacaatttg
gccaaggactgtgtggcccagggctgctgtgtggatctcttcctgtttccaaaccagtat
ttggatgtggccacactgggtgtggtaccttaccagacaggaggctccatttataaatac
gcctatttccagctggagacagaccagtacagattcctgaatgacttgagaagggatgtg
cagaaagaagtgggatttgatgctgtaatgagagtgcgcacgagcacaggtattagagca
actgacttttttggagctttctatatgagcaacacaactgatgtagagatggcaggtctg
gactgtgataaaacaatcacagtggaattcaagcatgatgataaattgagtgaagacagt
ggggcactgcttcagtgtgctctgctgtatacaagttgtgcaggacagcgacgactccgc
attcacaacctctccttgaactgctgcacgcagcttgctgacctctatcggaactgtgag
accgacaccctcatcaactacttggctaagtatgcatatcgtggagtcctgagtagtcca
gtgaagactgtacgagatgcactgatcaaccagtgtgcccagatcctagcctgctatcga
aagaactgtgctagtccctcttctgctggccagctcatcctccctgaatgcatgaagctg
cttcctgtgtacttgaactgtgtattgaagagtgatgttcttcagcctggcccagaggcg
accacggatgaccgtgcctacatccgtcagttagtgacatccatggatgtggctgaaaca
aatgttttcttttatcccaggctcttgcccctgaccaaagcagatgttgacagtgattcc
ttgccagcagccattcggaactctgaggagcgtctctccaagggtgacatctacctgctg
gagaacgggctgaacatctttgtgtgggtgggagtcagcgtgcagcaaagcctgatccag
aacctctttggagtgtcatccttcagtcaaattagcaatgccttgagtaccctgccagtc
ttggaaaaccccttttccaagaaagtgcgatctattgttgatatgcttcaagggcagaga
tcccgctacatgaagttgataattgtgaagcaagaagataagctggaaatgctgttcaag
cactttctagtcgaggacaagagcctgagtgggggagcttcatatgtggacttcctgtgt
cacatgcacaaggagattcggcagctactgagctag
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