Hirundo rustica (Barn swallow): 120756191
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Entry
120756191 CDS
T09369
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120756191
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
120756191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_17
TPR_19
TPR_14
TPR_11
CFAP70_TPR_C
TPR_16
TPR_12
TPR_Psidin_N
RMD1-3
TPR_CcmH_CycH
TPR_7
TPR_10
TPR_15
ANAPC3
CFAP70_mid_TPR
ARM_TT21_5th
TPR_YpiA_C
ARM_TT21
NatA_aux_su
TTC22_C
TPR-S
TTC22_N
PPR
HAT_PRP39_N
ChAPs
DUF8817
RSLD_CPSF6
Iml2-TPR_39
UBA_At5g58720
TPR_INTS8_3
APP_E2
Motif
Other DBs
NCBI-GeneID:
120756191
NCBI-ProteinID:
XP_039928031
LinkDB
All DBs
Position
8:19163611..19170633
Genome browser
AA seq
490 aa
AA seq
DB search
MSEQRREIMSTISKDSLKTSLLQLECHFTWALLKEHVGLEALEETIRDHIKFVVESNIVD
YNILSYVCHLKNSNEEALRNLRKAEEAIQKHHPGEIARRSLVTWGNYAWIYYHMQRYEEA
QAYVSKVENSCKKLSSTADGKIQLPEICAEQGWAFLRFGRNYFERAKNCFENALKSDPDN
PDFNAGYAIAMYRLEDCAERYGEEMKSCLEALKQAVELNPEDTTILALLALKLQRLKRGH
EGERYIEEGLQKTPDSPVFLRHAANFYRKKGDVNKAVEILEKALALTPQSVVLHHQLGLC
YRSLLQKTLHLKRTRYTPREEVENLIQLAIFHFKIVIEKKPVFFSAYGDLANIYALGRRY
EEAEELFQEVLQRNDVPCEEKQEIYFCYGNFQHFHMKSESEAIKYYIEGLKIDKDSYGRK
KCSEAVETLLGRKIRSGLGDATDIGTLGLVHKLNSKKQEAIECYKKAIALDPNNEEYQTA
LVELQLSISS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcagagaagagaaatcatgagtaccatttccaaggattccttgaagacttcc
ctgctgcagttagaatgtcattttacgtgggctttgctgaaggagcatgtaggtcttgag
gccctagaggaaacaatacgtgatcatatcaagttcgtcgtagaatccaacattgtagat
tataatatactctcctatgtatgtcacctgaagaattcaaatgaggaagccctgagaaat
ctcagaaaagctgaagaagctattcaaaaacatcacccaggtgaaattgccaggagaagt
cttgttacatgggggaattatgcctggatttactaccatatgcagagatatgaagaagct
caagcttatgtaagcaaagtggaaaacagctgcaaaaagctttcaagtactgctgatggg
aagattcagcttccagagatctgtgctgagcaaggatgggcatttttacgttttgggagg
aattacttcgagagggcaaagaattgctttgagaatgctctgaagagtgatcccgataac
ccagattttaatgctggctatgcaatagcaatgtatcgcttggaagattgcgctgagagg
tatggtgaagagatgaagtcatgccttgaggccctgaagcaggcagtggaactgaatcca
gaggacactaccattctggcattacttgcattaaaactccagcgattaaagcgaggtcat
gaaggggagaggtacattgaagaaggactgcagaaaacccctgattctcctgttttcctg
cgacatgctgctaatttttacagaaagaaaggagatgtgaacaaggcagtggaaattttg
gagaaggccctagcactgacgccacagtctgtcgttctgcatcaccaactaggactctgc
tacagaagtctgctacagaagacacttcacttgaaaaggacaagatacacacctcgagag
gaagtggagaatctcatccagcttgccatttttcattttaaaatagtgatagaaaaaaag
ccagtatttttttctgcctatggtgacctagcaaacatatatgcactaggcaggaggtat
gaagaagcagaagagctatttcaggaagtgcttcagagaaatgatgtaccctgtgaggaa
aaacaagaaatctacttctgttatggcaattttcagcattttcacatgaagtcagaatca
gaagccattaagtattacatagaaggtctgaaaatagacaaagattcctatggaagaaaa
aagtgcagtgaagctgtggagacattgttgggacggaaaattaggagcggtttaggagat
gccacagacattggtacacttggactcgttcataaactaaatagtaagaaacaagaggca
attgaatgttataagaaagctattgctttggatcccaacaatgaagagtatcagactgca
ttagttgagctacaactttccatctcaagctaa
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