Hirundo rustica (Barn swallow): 120756290
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Entry
120756290 CDS
T09369
Symbol
TMCO1
Name
(RefSeq) calcium load-activated calcium channel isoform X1
KO
K21891
calcium load-activated calcium channel
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120756290 (TMCO1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120756290 (TMCO1)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
120756290 (TMCO1)
Transporters [BR:
hrt02000
]
Other transporters
Pores ion channels [TC:
1
]
120756290 (TMCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF5683
DUF6809
Vpu
DUF2368
Exonuc_VII_L
DSHCT
DLH
DUF4257
Nucleoside_tran
Peptidase_S49_N
Folate_carrier
DivIC
Motif
Other DBs
NCBI-GeneID:
120756290
NCBI-ProteinID:
XP_039928336
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Position
9:complement(28925418..28942800)
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AA seq
192 aa
AA seq
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MSTMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFI
PLSYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQSRGELHGRVMLDGVCSLEFRQTDC
HLPSSSSNWNKI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgttcgccgacaccctcctcatcgtgttcatctccgtctgcaccgcgctg
ctggccgagggtataacttgggtgctggtttatcggacagacaaatacaaaagattaaag
gctgaagtggaaaagcagagcaagaaattggaaaagaagaaggaaacgataactgaatca
gcaggccgacagcagaaaaagaagatagagagacaagaagagaaactgaagaataacaac
agggatttgtcaatggttcggatgaaatccatgtttgccatcggcttctgcttcactgcc
ttgatgggaatgttcaactccatatttgacggccgagtggtggcaaagcttccgtttatc
cccctctcatacatccaaggtctctcccaccgcaacctcctgggtgaggattacaccgac
tgctcctttatcttcctctacattctctgcaccatgtcaatcagacagagcaggggggaa
ctgcatggaagagtgatgctggacggtgtctgtagtctggaattcagacagacagactgt
catctcccttcgtcttcaagcaattggaataaaatttag
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