Hirundo rustica (Barn swallow): 120756306
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Entry
120756306 CDS
T09369
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120756306 (CACNA1E)
04020 Calcium signaling pathway
120756306 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120756306 (CACNA1E)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120756306 (CACNA1E)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120756306
NCBI-ProteinID:
XP_039928382
LinkDB
All DBs
Position
9:complement(29233444..29339154)
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AA seq
2304 aa
AA seq
DB search
MQSTPQARRKEWEMARFGEAVAGRLGSGDGGSDQNRSRQGAPAPAGGSPGAFKQTKAQRA
RTMALYNPIPVRQNCFTVNRSLFLFGEENIVRKYAKKLIDWPPFEYMILATIIANCIVLA
LEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIV
VLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLL
LFFAILMFAIIGLEFYSGKLHRACYTNNSGELEELDPPHPCGVQGCPPGYECREWIGPND
GITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVL
GVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNSGTSAL
EVLRRATIKRNRTDAMSGDEHCVDISSVGERRLAQRRPLHPTLGNPSSHSGLKGARVDGA
SYLRHKERLLRISVRHMVKSQVFYWIVLSLVALNTACVAIVHHNQPAWLTHFLYYAEFLF
LGLFLLEMSLKMYGMGPRLYFHSSFNCFDCGVTVGSIFEVVWAIFRPGTSFGISVLRALR
LLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFNFMDGT
PSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYFIVLTLFGNYTLL
NVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPAIERDRRRRHH
MSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEGINKDEPPLINPHASIFRRK
RPGEGVTLEKCAEEQGKGERPLAEAPEQPVAGANPGGGEDRTSPRAKRDVWQQKSCHGNC
EPGEQDGAGGSVEDRARMRQSQRRSRHRRARVEGKDAAGALGSRSASQEMGLEEASTAEG
AQDGQRRGDVAAAEALIPGDPEAGGDSVRTNGVPAGDADLMGSARKGSPLRAAPELSQGK
TGNLTEQDCSSPDTSEQALLEPSRTVSRSEPDLSSIGPNTEKATESTAIMIDVHDSAVVQ
ISNKTDGEASPLKEAETKEDEEEMEKKKRKKEKSETGKAMVPHSSMFIFSTTNPVRRACH
YIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMVIKMID
QGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTQK
DCIGNYVDHEKNKMEVKCREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEE
DRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACI
DFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYE
LALKYLNIAFTMVFSLECVLKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDTKLVNT
SSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIKLDEESHINRHNNFRSFLGSLMLLFRSATGEAWQEIMLSCLEGKGCEPDTTATSG
QNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRI
WAEYDRAACGRISYKDMYKLVRVISPPLGLGENCPYRVACKRLVLMNMPVAEDMTVHFTS
TLMALIRTALDIKIAKGGADWQQLDSELQKEILTIWPHLSQKMLDLLVPMPKTSDLTVGK
IYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQDTLS
GLSSRGGFPSLSPLSPQEIFQLACMDPAQEQFQEHQSLEPEVREFQRVQPSNRGSYLPVD
TQDHAVSGRASSMPRLTVDPQVVTDTSSMRRSFSTIRDKRPNSSWLDEFSMERSSDNTYK
SRRRSYHSSLQLSARRLNADSGHRSEGHRSGRERGRSKERKHLLSPDISRCNSEERSPQA
QEESPERRRESRSPSEGRSQTPSRQGVGSLSESSIPSVSDTSTPRRGRRQLPPVPPKPRP
LLSYASMLRHAGDASPPADESEGGSPLLSSALDPNAAGPAESSSSPAGRQSRQSTPQRYI
SEPYLALHDDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHGWQMPNGHYRRRRR
GAAQGVVCGASIDVLSDTEEDDKC
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcacgccccaggcgcggaggaaggagtgggagatggctcgcttcggggaggcg
gtggccggcaggctgggctccggagatgggggctccgaccagaaccggagccggcaagga
gctcctgcccctgcgggagggagcccgggagccttcaagcaaaccaaagcgcagagagcc
cggactatggctctgtacaaccccatccccgtccggcagaactgcttcaccgtcaacaga
tcgctcttcctcttcggggaagagaacatagtcaggaaatacgccaagaagctcatcgac
tggcctcccttcgagtacatgatcctggcgaccatcattgccaactgcatcgtgctggcg
ctggagcagcacctccccgaggacgacaagacgcccatgtcacggagattagagaagacg
gagccctacttcattgggattttctgcttcgaggctgggattaagatcgtggccctgggg
ttcgttttccacaagggctcgtacctgcgcaacggctggaacgtcatggacttcatcgtg
gtcctcagcggcatcctcgccacggccgggacacacttcaacacccacgtggacctgcgg
acgctgcgggccgtgcgcgtgctcaggcctctcaagctcgtctcgggcattcccagcttg
cagattgtgctgaaatccatcatgaaggccatggtgcctctcctccagattggcctgctg
ctcttttttgccatcctcatgtttgccatcatcggcctggagttctacagcgggaagctg
caccgagcctgctacacaaacaattcaggtgaactagaggagctggaccccccccatccc
tgcggggtgcagggttgccccccgggctacgagtgccgggagtggatcggtcccaacgac
gggatcacgcagttcgacaacatcctcttcgctgtgctgaccgtcttccagtgcatcacc
atggaagggtggaccacagtcctgtacaacaccaatgatgccttaggagccacctggaac
tggctgtacttcatccccctcatcatcattggatccttctttgtcctcaaccttgtcctg
ggagtgctgtcaggggagtttgccaaagagcgggagcgcgtggagaaccgccgagccttc
atgaagctgcggcgccagcagcagatcgagcgggagctcaacggctaccgggcgtggata
gacaaagcggaggaagtcatgctggctgaagagaacaaaaactcggggacctcagcctta
gaagtgctcaggcgagccaccatcaagcggaaccggacggatgccatgtcgggtgacgag
cactgtgtcgacatctcctccgtgggcgagcggaggctggcgcagaggagacctcttcac
ccaaccttgggaaacccctcgagtcactctggcctcaaaggcgccagggtggacggtgcc
tcctacttacggcacaaggagcggctcctgcgcatctccgttcgccacatggtgaaatcc
caggtcttctactggatcgtcctgagcctggtggctctcaacaccgcctgcgtggccatc
gtccatcacaaccagccagcctggctcacccacttcctctactatgcagagttcctgttt
cttgggctcttccttctggagatgtccttaaagatgtacgggatggggccacgcctttac
ttccattcttccttcaactgcttcgactgtggggtcacagtgggaagcatcttcgaagtg
gtttgggctatattcagaccaggaacctcttttgggatcagcgtcctacgagcccttcgt
ctcctgcggatatttaaaataaccaagtactgggcatccctgaggaatttggtggtgtcg
ctgatgagctccatgaaatctattatcagtctgctcttcctcctcttcctcttcattgta
gtctttgccctgctgggaatgcagctgtttggaggcaggtttaacttcatggatgggact
ccgtcggccaactttgacaccttccctgccgccatcatgacggtgttccagatcctgacg
ggcgaggactggaacgaggtgatgtacaacggcatccgctcccagggaggcgtgcgctca
gggatgtggtcctccatctacttcatcgtcctcaccttgtttggaaactatactctgctg
aacgtcttcttggccatcgccgtggacaacctggccaacgcccaggagctcaccaaggac
gagcaggaggaagaggaggcctttaaccagaagcacgcccttcagaaagccaaagaagtc
agccccatgtctgccccaaacatgcctgctatcgaaagagacaggcggaggagacaccac
atgtcgatgtgggagccacgcagcagccacctgcgggagcgtcggcggcggcaccacatg
tcggtgtgggagcagcgcaccagccagctgcgccggcacatgcagatgtccagccaggag
ggcatcaacaaggatgagccgcccctcatcaacccccacgccagcatcttccgcaggaag
agacccggggagggcgtcaccctggagaaatgcgccgaggagcagggcaagggcgagcgg
ccgctggccgaggcacccgagcagccggtcgcgggcgccaaccccggcggcggtgaggac
aggacatcgccccgggccaagcgggacgtgtggcagcagaagtcttgccatgggaactgc
gagccgggagaacaggacggcgcgggcggcagcgtcgaggatagggccaggatgaggcag
agccagcggcgcagccggcaccgcagggcccgcgtggaggggaaggacgcggccggagcc
ctgggcagccgctcggccagccaggagatggggctggaggaggccagcaccgccgagggg
gcgcaggacgggcagcgccgtggggacgtggctgcagcagaggcgctcattccgggggat
ccagaggcgggcggggactccgtcaggacaaacggggtccctgcaggcgacgccgatctg
atggggagcgccaggaaggggagccccctgcgcgccgcgcccgagctctcccaggggaag
acgggcaacctgacggagcaggactgcagcagcccggacacgagcgagcaggcgctgctg
gagcccagccgcaccgtcagccgcagcgagcccgacctctcctccatcggccccaacacc
gagaaggccaccgagagcaccgccatcatgatcgatgtccacgactccgctgtggtacag
attagcaacaagacagacggcgaagccagccccttaaaggaggctgagaccaaggaggat
gaggaagaaatggagaagaagaagcggaagaaggaaaagagcgagacgggcaaagccatg
gtgccgcacagctccatgttcatcttcagcaccaccaacccggtgaggagggcctgccac
tacatcgtgaacctgcgctacttcgagatgtgcatcctcctggtgatcgccgccagcagc
atcgccctcgccgccgaggatcccgtcctcaccaactccgaccgcaacaaagtgctgagg
tatttcgactacgtcttcactggggtcttcaccttcgagatggtgatcaagatgattgat
cagggcttgatcctgcaggatggctcctacttccgagacctctggaacatcctggatttc
atcgtggtggtgggagcgctggtggctttcgccttggcgaacgctttggggaccaacaag
gggcgggatatcaagaccatcaagtctctccgtgtgctgcgggtcttgaggcccctgaaa
accatcaagagactgcccaagctgaaggccgtttttgactgcgttgtgacatctctcaag
aacgtcttcaacatcctcattgtctacaagctcttcatgttcatctttgccgtcatcgcc
gtgcagctcttcaaggggaagttcttctactgcactgacagctcgaaggacacgcagaag
gactgcatagggaactacgtggaccacgagaagaacaagatggaggtgaaatgccgggag
tggaagcggcacgagtttcactatgacaatatcatctgggctctgctcaccctgttcacg
gtgtccaccggcgaggggtggccccaggtgctgcagcactcggtggatgtgacggaggag
gaccgcgggcccagccgcagcaaccgcatggagatgtccattttttatgtcgtctacttt
gtggtcttccccttcttctttgtcaacatctttgtggctctcatcatcatcacgttccaa
gagcaaggagacaaaatgatggaggagtgcagcctggagaagaacgagagggcctgcatt
gactttgccatcagcgccaagcccctgacgcggtacatgccccagaacagacacaccttc
cagtaccgcgtgtggcacttcgtggtgtccccgtccttcgagtacaccatcatggccatg
atagcgctcaacaccgtggtgctcatgatgaagtactattctgctccgtacacctatgag
ctggccctgaagtacctgaacattgccttcaccatggtgttctccttggagtgcgtcctc
aagatcatcgctttcggcttcctgaattatttccgggacacctggaacatctttgacttc
atcacggtcatcggcagcattacggagatcatcctgacggacaccaagctggtgaacacc
agcagcttcaacatgagcttcctgaagcttttccgggctgctcggctcatcaagctgctc
cgccagggttacaccatccgcatcctgctctggacgtttgtgcagtccttcaaggcactc
ccctacgtctgcctcctgattgccatgcttttcttcatctacgccatcattgggatgcag
gtttttggcaatatcaaactagatgaggagagccacattaaccggcacaacaacttccgc
agcttcctgggctccctcatgctcctcttcaggagtgccaccggagaggcgtggcaggag
atcatgctgtcctgcctggagggcaaaggctgcgagccggacacgacggccacgtccggg
cagaacgagaacgagcgctgcggcaccgacctggcctacgtttactttgtgtccttcatc
ttcttctgctccttcctgatgctcaacctgtttgtggcagtcatcatggacaactttgaa
tacctgacacgggattcctccatcctgggccctcaccatctggatgagtttgtgcgcatc
tgggcagagtatgaccgagcagcgtgcggcaggatctcgtataaggatatgtacaaatta
gtacgggtgatctcgcctcctctgggcctaggagagaactgcccctacagggtggcgtgc
aagagactggtgctgatgaacatgcccgtggccgaggacatgaccgtccacttcacctcc
accctcatggcgctgatccgcacggccttggacatcaaaattgccaaaggtggtgcagat
tggcagcagttggactccgagcttcaaaaggagatcctgaccatttggcctcacctatcc
cagaagatgctcgacctgttggtacccatgccaaaaacctctgacctgactgttgggaaa
atatatgcagccatgatgatcatggattactacaagcagagcaaggcgaagaagcagcgg
cagcagctggaggagcagaagaatgcccccatgttccagcgcatggagccgtcctctctg
ccgcaggaaatcatctccaacgccaaggctctgccgtacctgcagcaggacaccctctcg
ggcctgagcagccgaggagggttcccctcgctgagcccgctctcgccgcaggagatcttc
cagctggcgtgcatggatccggcccaggagcagttccaggagcaccagtctctggagcca
gaggttagggagtttcaaagagtgcagccctctaaccgtggcagctaccttcccgtggac
actcaggaccacgctgtctctgggagggcctcctccatgcctcgtctcactgtggatccc
caggtggtgacagacaccagctccatgaggagatccttctccaccatccgggacaagcgg
cccaacagctcctggctggatgagttctccatggagcgcagcagcgacaacacctacaag
tcccgccggcgcagctaccactcctcgctccagctgtccgcccggcgcctcaacgccgac
tcgggccaccggtccgaggggcaccgctcgggcagggagcggggccggtccaaagagcgc
aagcacctgctgtcccctgacatctcccgctgcaactccgaggagaggagtccccaggcg
caggaggagtcgccggagcggcggcgcgagtcccggtcacccagcgagggcaggtcacag
acacccagcaggcagggcgtgggctccctgagcgaaagctccatcccctccgtctcggac
accagcacgccccggcgaggccgccgccagctgccgccggtgccccccaagccgcgtccc
ctgctgtcctacgcctccatgctgcggcacgccggggacgcctctcctccggccgacgag
agcgagggcggctcgccgctgctctcctccgccctggatcccaacgcggccggcccggcg
gagtcttccagctccccggcggggaggcagagccggcagtccacgccgcagcgctacatc
tcggagccctacctggcgctgcacgacgactcgcacgcctcagactgcggtgaggaggag
acgctcaccttcgaggcggccgtggccaccagcctcggccgctccaacaccatcggctcg
gcgccgccgctgcggcacgggtggcagatgcccaacgggcactaccggcggcggcggcga
ggagcggcgcagggcgtcgtgtgcggggccagcatcgacgtgctcagcgacaccgaggag
gacgacaagtgctag
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integrated database retrieval system
