Hirundo rustica (Barn swallow): 120756410
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Entry
120756410 CDS
T09369
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120756410 (PTBP2)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120756410 (PTBP2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
120756410
NCBI-ProteinID:
XP_039928673
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Position
9:17925864..17970688
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AA seq
537 aa
AA seq
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MDGIVTDVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDNKKFKGDDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQASNAPISGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGESHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggtgtgaagagaggatctgacgaacttctt
tcaggcagtgtactcagtagcccgaactctaacatgagcagcatggtagttactgccaat
ggtaatgacaacaagaaattcaaaggtgatgataaaatggatggggctccttctcgtgtt
cttcatatcaggaaattgcctggggaagtgacagaaacagaagttattgctttaggttta
ccttttggtaaagtaaccaacatcctgatgctgaaagggaaaaaccaggcatttttggaa
cttgccacagaagaagcagctatcactatggttaattactactctgctgtgacacctcat
cttcgtaaccaacccatttatatccagtattccaatcataaagaactaaagactgataac
acacttaaccagcgggcccaagctgttcttcaggcagtgacggctgtgcaggcatcaaac
gctcccatcagtgggaccactgttagtgagagtgcagtgactccagctcagagtccagta
cttagaataattattgacaacatgtactatccagtaaccctggatgttcttcatcagata
ttctctaaatttggtgctgtattgaagataatcacattcacaaagaataaccagtttcaa
gctttactgcagtttggtgatccagtaaacgcacagcaagcaaaacaagccttagatggt
caaaatatttataatgcttgctgtaccctacgaattgatttttccaaattggtgaacttg
aatgtcaagtacaacaacgataaaagcagagactacactcgtcctgaccttccatctggt
gatggacagccaacgctggacccagctattgctgcagcatttgcaaaggagacctctctt
ctagggcttcctgttgcagctgttccaggagctctgagtcctttggctattccaaatgct
gctgctgcagctgcagctgctgctgctggccgtgtgggaatgcctggggtttcagctggt
ggcaatacagtcctcctggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttatacaataagaaa
gatagtgcccttatacagatggccgatggaaaccagtcacagctggccatgagccatctt
aatggacaaaaaatgtatggaaagattattcgggtcaccctttctaaacatcagacagta
caactacctcgagagggacttgatgaccaagggctgactaaagattttggtaattcacct
ttgcatcgcttcaagaaacctggttcaaaaaactttcaaaatatattccctccttctgca
acacttcacctgtccaatattccaccatcggtagcagaagaggatctacgcacattgttt
gctaacactggaggcactgtgaaagcatttaaattttttcaaagagatcacaagatggca
cttcttcagatgtcaacagtagaagaagctattcaggctttgattgatctccacaattac
aatctgggagaaagtcaccatctgagagtttctttctctaagtcaactatttaa
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