Hirundo rustica (Barn swallow): 120756411
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Entry
120756411 CDS
T09369
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03320
PPAR signaling pathway
hrt04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120756411 (RXRG)
03320 PPAR signaling pathway
120756411 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120756411 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hrt03310
]
120756411 (RXRG)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120756411 (RXRG)
Nuclear receptors [BR:
hrt03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120756411 (RXRG)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
120756411
NCBI-ProteinID:
XP_039928686
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Position
9:28482884..28506112
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AA seq
467 aa
AA seq
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MYGNYPHFIKFPAGFGNSPVHASSASVSLSSGLSTGNPVEGPHSYLEPPANASRALPSPM
NAIGSPVNSLGSPYRVIASSLGSHPVALSSAPGMNFVTHASPQLNVLNSVSSSEDVKPLP
GLPGMGNMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCR
DNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSENEAESTSSGSEDMPV
ERILEAELAVEPKTEACSDVGTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLE
DQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQVT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattatcctcacttcattaagtttcctgcgggctttggcaattcccccgtg
cacgccagctccgcgtccgtgagcctgtcctcgggcctttccacggggaacccagtggag
gggccccacagctacctcgagccccccgccaacgcctcgcgggcgctgccgtcgcccatg
aacgccatcggctccccggtgaacagcctgggctcaccctacagggtcatcgcctcctcc
ctgggctcgcaccccgtggctctctcctcagccccgggcatgaatttcgtgacgcacgcc
agcccgcagctcaatgtcctgaacagtgtcagcagctcggaggatgtcaagcccttgccg
ggtctcccggggatggggaacatgaattatccatccacaagtccaggatccctagccaaa
cacatctgtgccatctgtggggacaggtcctcagggaagcactacggcgtgtacagctgt
gagggctgcaaaggcttcttcaagaggacgatccggaaggatctgatctacacctgccgg
gataacaaggattgcctcatagacaagcgccaacgcaaccgctgccagtactgccgctat
cagaagtgcctcgccatggggatgaagagggaagctgtgcaggaggagaggcagaggagc
agggagcgcagtgagaacgaggccgagtccacgagcagcggcagcgaggacatgcccgtg
gagaggatcctggaggctgagctggcagtggaacccaaaacggaggcgtgcagtgacgtg
ggcacggagagctcgacaaacgaccctgtcaccaacatctgccacgctgctgacaagcag
ctcttcacactcgtggagtgggccaagcgcatcccccacttctccgacctgacgctggaa
gaccaagtcattctcctgcgggcaggctggaatgagctgctcattgcctctttctcccat
cgctccgtgtcggtccaggacgggatcctgctggccacgggcctgcacgtgcaccgcagc
agcgcccacagtgctggcgtgggctccatcttcgacagggttctgacagagctggtgtcc
aaaatgaaagacatgcagatggataagtcggagctggggtgcctgcgagccattgtcctg
tttaacccagatgccaagggtttgtccagcccctcggaagtggaatcactgagggagaag
gtctatgccacgctggaagcctacacgaagcagaagtaccccgagcagccagggcggttt
gccaaactcctcctgcgcctgccggcgctgcggtccatcgggctgaagtgcctggagcac
ctcttcttcttcaagctgatcggagacacccccatcgacacctttctcatggagatgctg
gagacacccctgcaggtcacttga
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