Hirundo rustica (Barn swallow): 120756466
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Entry
120756466 CDS
T09369
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120756466 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120756466 (PRPF38A)
Spliceosome [BR:
hrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120756466 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
120756466 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120756466
NCBI-ProteinID:
XP_039928816
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All DBs
Position
9:complement(5804685..5808397)
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AA seq
311 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRNE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgagaatctacgagtccaagtactggaaggaggagtgtttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctgaagatgctgcagatc
cagcccgagaaggacatcatcgtggagttcatcaaaaacgaggacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgactgctacaagtacctg
gaaccgctgtacaacgactatcggaaaattaaaagtcagaacagaaatggggaatttgag
ctgatgcacgtggatgaatttattgatgagctactccatgaggaacgtgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgagcaacttgagcctcgt
gttagtgctctggaagaagacatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggagcggatcccatctcctgaccaccgcagaaggggctacagggacctg
gacaagccccgcagatctccggtggtgcggtaccggcggagccggagcaggtccccgagg
aggcgcagccgctctcccaagagaagaagcccatcaccgcgccgggaacggcatcgcagc
aaaagcccgagacggcaccggagcagatcccgggagaggcgccacagatcgagatctaaa
tctccagggcatcaccgtagtcacaggcacagaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcggaatgaataa
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