KEGG   Hirundo rustica (Barn swallow): 120756602
Entry
120756602         CDS       T09369                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120756602 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrt03019]
    120756602 (NDC1)
Messenger RNA biogenesis [BR:hrt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120756602 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 120756602
NCBI-ProteinID: XP_039929077
LinkDB
Position
9:5032395..5046699
AA seq 672 aa
MEAAAGGQRALLRQVLGWRVAATITWSVLLLPICTAAFVVFSGLDPFHPVRWISNSFNDL
YTSYVIFCIFLMSVVIIVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSFVHAIMG
MLVAWCATVMTKGRFQFLAVSCTPSESLEDAVPQMCLNEYHLFFLLSGAFLGYSYSLFYL
INNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWICTT
MDLHTDSKLHPLDTLSGLLDLSLFYHTWLSGVFLLMTWYIAWLLFKIYATESHHFPVQPT
FAQETDQCLPKILNSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLIAQQEAAAANGRAKPPVGEMKVPPQTPGAVGIEDMSFQSQRSNIVL
RASMSPLVKPSLMPVKTSPGSDVGSPFSSPALSYKMGIVDVKSPWHGSVQSPLVVRRGPK
LWTSISDQQMNGSHHESLPVLSAARTGSEAVQPKFIYTWLQNKQEQIKNFLSKRALIMYF
FSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVV
DRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEH
KKRLQQFLEYKE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggaggcggcggcgggcgggcagcgggcgctgctccggcaggttctgggctggcgagtg
gccgccaccatcacctggtccgtgctgctgctgcccatctgcaccgcggccttcgtcgtc
ttcagcggcctcgacccgttccacccggtgcgctggatctccaattctttcaatgatttg
tatacttcctatgtcatcttttgtatcttcctgatgtctgtggtgataatagtaataagc
atcttcaacgttgagttttatgcagttgtgccatcgataccatgctctcgattagcactg
ataggaaaaattattcaccctcagcaagtcatccattcctttgttcatgctatcatggga
atgctggttgcttggtgtgctacagtcatgacaaaagggaggttccagtttcttgctgtg
tcctgcacaccttcagagagcctagaagatgctgttcctcagatgtgcctaaatgagtat
cacctcttctttctgctttctggagctttcttgggatacagttacagccttttctatctt
attaacaacatgaattatttgccatttccaatcatacagcaatacaagtatttacgcttc
agaagatctctgcctctcctgataaaacacagttgtgtggaatcactatattttgttaga
aacttctgtgtcacttattacttttttggttatatcccaaaggtgtggatatgtaccacg
atggatctccatacagacagtaaattacatcctcttgacactctgagtggcttgttggat
ctctccttgttttaccatacctggctgagtggtgtgtttcttctgatgacctggtacatt
gcttggctgctcttcaaaatctatgccacagagagtcatcatttccccgttcaaccaaca
tttgctcaggagacagaccagtgcctgcctaaaatcttaaacagcaatcctcccctcctt
ataaagtttttagccttacaagatttgatgttactttcccagtattctcctgttcgacga
caggaagtctttagcctttctcagccaggtgggcacccacacaactggactgccatatcc
cgggagtgtttgagtctcctgagtgacctcactcagaggctgattgcacagcaagaagca
gcagcagcaaacgggagagcaaagccaccagtgggagagatgaaagtacctccacagact
ccaggagctgttgggatagaagacatgtcattccagtcacagaggtccaacattgttctc
agagcctccatgtctccactggttaagccatccctgatgcctgtgaagacatctcccggc
tctgatgttggctcacctttcagctctcctgctttaagttacaagatgggaattgtggat
gtcaagtctccttggcacggatcagtccaaagtccccttgtcgtgagaaggggaccaaag
ctgtggacgtcaatttcagatcagcaaatgaatggttcccaccatgaatccttgccggtg
ctctctgctgcaagaactggcagtgaggcagtgcagccaaaatttatttacacatggctt
cagaacaagcaagaacagataaaaaacttcttgtccaaacgagcgctgataatgtatttc
ttcagcaagcacccagaagcttccatccaagctgtcttctctgatgcccaaatgcacatc
tgggctttggaaggtctgtctcacttggtagcagcctcttttactgaagaccagtttgga
gttgtccaaactacactgccagctatcctgaacacgttactgactcttcaggaggtcgta
gacagacatttcaaactgccacatgtttctagcaaacctccccggatttcagggagtctg
gtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaaacagcccta
taccggataactactgtctttggagagcacttgaatgctgtacaagtgtctacagaacat
aagaaaagacttcagcaattcctggagtacaaagaatga

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