Hirundo rustica (Barn swallow): 120756645
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Entry
120756645 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: vitellogenin-1-like
Organism
hrt
Hirundo rustica (Barn swallow)
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Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
120756645
NCBI-ProteinID:
XP_058277739
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Position
9:complement(12172270..12237481)
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AA seq
2055 aa
AA seq
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MAAHPRLRAIRAPKAPLRPGPRSRRARSRARGAPRRGAEPECHLPGPQLETAGNRWARRK
PGPGTGPEELGQLLGWRGKRTHIPSKSTQNSCSLREIAGSQHLNYQPDLSENKVYTFDYE
TTLLSGLPEKGLARAGIRIKCKVEISGIGPKLCLIRIHSIEAAEYNGAWPTSSFSRSLKL
TQVLTGQLSIPIKFEYSSGHVGNILAPDSVSDDALNIYRGIMNVLELSIKKTQNSYSLQE
AGIGGICNTTYAIQENKRANLVYVTKSKDLNSCEEKVQIVTGSAYTHPCKTCQQRNENSR
ATATYNYKIKYMRSEAVITQADIEEIHQFSPFNEITGGNAIVEARQKLVLTDVQKQRAEV
PPKEYQNRGSLQYQFGSELLQLPVHLFKIKDVESQIEESLQELVEATSDQLPSDAPAKAL
KLLHLFRAANEENYESVWKHLSNRPAYRRHILDIIPAVASHRALRFLRHKMERQELTNWE
VTQTVLVALHSSTPTRDVMEEATVIVKKHCPRSSSVLGKVCHLSYASLCHKQCSSSDSCS
ECLQLLHSFAGEALSKSSTEEISLALKALGNVGHPASIKHIKKFLPGYAAGASDLPLRVH
ATAVMALKNIGLKDPKMVQAITLEIFLNQKIHPRIRMLAAVVLLETKPGLPIVMTLADAV
LKEPSMQVASFIYSHLRALGRSTDPDLQLMASACRMAIRALSPKFDRSGYQFSKVFRFSI
FKDFLMSGLAAKYLVLNNAGSLIPAMAMSQLRTHFLGRVADPLEVGIAVEGLQEMFAKGY
SPDRDWETQYDFKKILKTLSDWKAFSSDKPFASGYLKMFGQELFFGGLDKYAIQNALQAW
YGSDEKIPSLRRIISSLQSGVGRQWTKALLSSEIRRIVPTCTGFPTEASFYYSSVTKVSG
NVQAQITPSPKSDFRLTELLNANIKLRSKMSLSMAKEVTFVMGINTHTVQAGLEARTKMD
VHVPVNVVATIQMREKNIKIEIPPCKDETNIISVRSKTFAVTRNIGDLSASKMTPVLLPE
AVTDIMKTSFNSDSASGEIDSTEDRQSAEDVSSGNPFSSGHSSSRKEPFVQSVCFNASTF
GVQVCIEKKSIHAAFIKNVPLYYLVGEHALRMTFKPVYTEAPIEKIQVTIQAGDQAPTKM
IRLVTFEDPEAQASSRKQAIKKVKKILADTDDQGTRKYRSSSSSASSASGSAESTTSSPS
SSDSDDRASQGGTQINLKTAQPKAKGKKFYPFGDSGSSSSSGSSSKSSSSSSSGSSSDSS
SSGSSSSKSSSSSSKSSSSSSKSSSSSSSSKSGSSSSKSSSSNSKSSSSNSKSSSSNSKS
SSSNSKSSSSSSKSSSSGSKSSSSGSKSSSSGSKSSSSGSKSSSSKSSSSKSSSSSSQSS
SSSRSSSSKGSSRGSAGSSSSSKASGIKLKAKKQSKTTSFPLASAAEGERSAREQKSKTQ
SSSSSSESSGASHWHSKSDKRAERNHAKSQVSRXSSHDISTEWESHLPKVYSLRFKSAHI
HWHPDHKGSSSSSSSSSELGSSHRNSSSSSGSSSSSSSSSHHHHHHGENSAHNSRRSKGV
SIHHHSHGSSLTHERNFLGDVIPPGITIVAQAVRSDNRNQGYQATAYVRSDAAKVDVQLV
VVQLAETNWKACADAVILPLKAQARLRWGKECQDYRIAAVTTTGQLAKKPAAQLKVQWGN
LPSWIKKTSTAFMQYIPGAALVLGFSEVHQRNPSHEFIVRAAATSPRTIDTVIKAPEVTL
YCQGFRLPFTLPLGPSPDYETRDITAWNLFPEIASQIAQEDQSTCEIRERDFKTFDGVSH
SYSFNKSCNLVAVQDCTEHPKFIITTRKVDPQSFSREVHINTTSVNITICPASNSSLLVA
CNEERVLSQSGGSEYIKDNVKIYKNGKTVTVEVPALGLKKVTFDGVNLKVTVASWMRGKT
CGVCGNNDREKENELLMPNHRLAHSCSAFVHSWVLLEETCSGGCKLQRSYVKLNRNPTID
GEESTCYSVDPVLKCMKDCTPIEKASVKVGFHCFPKETAVSLLEWQKSSDKKSAFEDVVE
SVDADIDCTCTGSCS
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacacccacggctccgggcgattcgagccccgaaagcgccgctccgccccggg
ccgcgctcaaggcgcgcccgcagccgcgcccgcggcgccccgaggcgcggagcggagccc
gagtgccacctgccggggccgcagctggaaaccgctggaaaccgctgggcacggcggaaa
cccggcccgggaacagggccagaggagctggggcagctgcttggctggagaggaaaaaga
acgcacattccctctaagtccacgcagaattcatgcagcctcagagaaatagcaggaagc
cagcatcttaattaccaacctgatctcagtgaaaacaaggtttatacatttgattatgaa
accacacttctcagtggacttccagagaaaggacttgcaagagctggaataagaataaaa
tgtaaagtggaaattagtggtattgggccaaaactttgtcttattaggatccactcgatc
gaagctgcagagtacaatggtgcctggcccacgagttcattctctcgatcactgaaactg
acccaggtcctgactgggcagctcagtatccccatcaagtttgagtacagcagtggccac
gttggaaacattttggctcctgattctgtctcggatgatgctctgaacatttacagaggg
attatgaatgtgctggagctgagcataaagaagacacagaattcatacagtttacaggag
gctgggattggaggtatttgtaacacaacatatgcaattcaggaaaacaagagagcaaac
ctagtctatgtgaccaaatccaaggacctgaacagctgtgaagagaaagttcaaattgtc
acaggttcagcatacactcatccatgcaagacctgccagcagaggaacgagaattcccgt
gcaaccgctacttacaattataaaattaaatatatgcgtagtgaagctgtaattacacaa
gctgacatcgaggaaatccaccagttttcacccttcaatgagataacaggaggaaacgct
atcgtagaagcaaggcagaaacttgttttgactgatgtgcagaagcaaagggcagaggta
ccaccaaaagagtaccagaatcgtgggtctcttcagtatcagtttggcagtgaattgctt
cagcttcctgtccacttattcaaaataaaagatgtggaaagccagatagaggaaagtctg
caagaattagtagaggccacctctgaccaacttcccagtgatgcaccagcaaaagctctc
aagcttctgcacctcttccgtgcagcaaatgaggagaattacgaatcagtgtggaagcac
ctctccaaccgaccagcatacaggcgccacattttggatataattcctgcagtggccagc
catcgtgcactcaggttcctgcggcataaaatggaaaggcaggagctcaccaactgggag
gtgactcaaacagtgctcgtggctctgcactccagcactccaactcgggatgtgatggag
gaagcaacggtcatcgtaaagaaacattgcccacgctcaagctctgtgcttggcaaggtt
tgccacctcagctacgcgtcgctgtgccacaaacagtgttcctcatcagactcctgctcc
gaatgtctccagcttcttcatagctttgcaggagaggcattgagcaagtctagcacagaa
gaaatttccctggctttgaaagcccttgggaatgtaggacatccagccagcatcaagcac
atcaagaagtttttgccaggatatgcagcgggtgcctcagatttgccactcagggtccat
gcaactgctgtgatggccctgaaaaacataggcctgaaagaccccaaaatggtccaggct
atcacccttgagattttcctgaatcaaaaaattcatcctcgaatccgaatgttagctgcg
gtggttttgcttgaaaccaagccaggtcttccaatcgtgatgacattagctgatgctgtg
ctgaaggaacctagtatgcaagtggcaagtttcatctactctcacttgagggccctgggt
agaagcacagatccagatcttcaactgatggcttctgcctgcagaatggctatcagagcg
ctaagtcccaaatttgacagatctggatatcagttcagcaaggttttccgcttcagtatc
tttaaagatttccttatgagtgggctggcagctaaatatttggtattgaataatgcgggt
agcttaattccagctatggcaatgtcccagctacggacacatttccttggaagagtggct
gatccattggaggtaggaatagctgttgaaggactgcaggagatgtttgctaaaggttac
tctccagacagggactgggagacccaatatgacttcaagaaaatcctgaaaacgctctct
gactggaaggcattctccagtgacaaaccttttgcatcaggctacttgaagatgtttggc
caagagctgttttttggtggacttgataaatatgccatccaaaatgcactgcaggcatgg
tatggatctgatgaaaaaatcccttcactaaggagaataatcagtagccttcaaagtggt
gtagggaggcagtggaccaaagctctcctgtcctctgagatccgccgcattgtgcccacc
tgcactggcttcccaacagaggccagcttctattactcttctgtcacaaaagtgtcagga
aatgttcaagcacagattacaccttcccccaagtctgatttcagattgactgagttacta
aatgccaatattaagctgagatccaaaatgagtctaagcatggccaaggaggtgaccttt
gtaatgggaatcaacacacacacagtccaggcagggctggaggcacgcaccaaaatggat
gttcatgtacctgtgaatgttgttgccactatccagatgagggaaaaaaatatcaaaatt
gaaattccaccatgtaaagatgagactaacataattagcgtaaggtccaagacatttgct
gttacacgaaatattggggatttgtctgctagtaagatgactccagttcttttacctgaa
gcagtgaccgacataatgaagacgtccttcaattcagattctgcatcaggcgagattgat
agcacggaggatagacagtctgcagaggatgtttcatcaggaaatcccttttcttctgga
cactcttcttcccgaaaagagccatttgttcagtctgtgtgcttcaatgcaagtacattt
ggagttcaagtgtgcattgagaaaaaaagcatacacgcagcatttatcaaaaatgtgcct
ctttattacctagttggagagcacgccctgagaatgaccttcaagccagtttacaccgag
gcacctattgaaaaaatacaagtcacaattcaagcaggagaccaagctcctacaaaaatg
atacgtctggtaacatttgaagatccagaagcacaagcatcttccagaaaacaagcaatc
aaaaaagtgaagaaaatccttgcagacactgatgatcaggggacaagaaaatataggagc
tcatcatccagtgccagcagcgccagtggaagtgccgagagtacaacgagcagcccttcc
agcagcgactctgatgacagagcatcacagggaggcacccagataaatctgaaaacagca
cagcctaaagccaaaggaaagaagttctacccctttggggacagtggcagcagcagcagt
agtggtagcagcagcaaaagcagtagtagtagcagcagtggcagtagtagtgatagtagt
agcagtggcagtagtagtagtaagagcagcagtagtagtagtaagagtagcagtagtagc
agcaagagtagcagtagtagtagtagtagtaagagcggcagtagtagcagcaaaagcagc
agtagtaacagcaaaagcagcagtagtaacagcaagagcagcagtagtaacagcaagagc
agtagtagtaacagcaagagcagcagtagtagcagcaagagcagcagcagtggtagcaag
agcagcagcagtggtagcaagagcagcagcagtggtagcaagagcagcagcagtggtagc
aagagtagcagtagcaagagtagcagtagcaaaagcagtagtagcagcagccagagcagc
agcagcagcaggagtagcagcagcaaaggcagtagcagaggcagtgcaggtagcagcagc
agtagcaaagcatctggtataaagcttaaggctaagaagcaatccaaaaccacatcattt
ccgcttgccagcgctgctgaaggagagagaagtgcccgtgagcagaagtctaaaacacag
agtagcagcagcagcagtgaaagcagtggtgcttcccattggcacagcaaatctgacaaa
cgggctgagaggaatcacgccaagtcccaagtgagtaggnncagtagtcacgacatttcc
acagaatgggaatctcaccttccaaaagtatacagtctccgcttcaaatctgctcacatc
cactggcatcccgatcataaaggatcaagcagctcatcatcatcttcctctgagctggga
agcagtcacagaaacagcagcagtagcagtggcagcagcagtagcagcagcagcagcagc
caccatcaccaccaccatggagaaaattctgcccacaactcaaggaggagcaaaggagtc
agcatccaccaccacagccatggctccagcctgacacatgagcgcaacttcctgggagat
gtaattccacctggcattacgattgtggcacaggcagtaaggagtgacaacagaaatcaa
ggttatcaagctacagcatatgttcgttctgatgctgccaaagttgatgtgcaactagtt
gtggttcagctggctgaaaccaattggaaagcatgtgctgatgctgtgatactgcctctg
aaagcacaggccagactgagatggggaaaggagtgccaggattacaggatagcagcagtg
actaccacaggacaactggcgaagaagccagctgcacagctgaaggtgcaatggggaaat
cttccatcctggataaaaaagacaagcacagcattcatgcaatacattcctggtgcagca
ctcgtgttgggcttctcagaagtacatcagagaaatccatctcatgaatttatagtaaga
gcagctgcaacatctccacgaacaattgatacggtaattaaagctcctgaggtaacgctt
tattgtcagggattccgattaccattcactctgcccttaggcccatctccagattacgag
actcgagatatcactgcctggaatttatttcctgaaatagcttcacaaatagcacaagaa
gatcaatccacttgtgaaatcagagagagagatttcaaaacgtttgatggcgtgagtcat
tcatattctttcaataaaagctgcaacctggtggcagttcaagactgtactgaacaccca
aaattcatcattactacaagaaaggttgatcctcaatctttctcaagagaggttcacata
aatacaacatcagtgaacatcacaatctgtcctgcctcaaattcatctctccttgtggca
tgcaatgaagaacgagttctatcacaaagtggaggttctgagtacataaaagacaatgtt
aaaatttataaaaatggaaaaactgttactgtggaagttccagcactcggactgaagaag
gtgacttttgatggtgtaaatcttaaggttacggttgcttcatggatgagaggaaagacc
tgcggagtttgtggtaataatgacagagaaaaggaaaatgaactcctcatgccaaaccat
aggctggcacacagctgttctgcatttgttcattcatgggtactgctagaagaaacctgc
tctggtgggtgtaagctgcagcgcagttatgtgaagctgaatcgaaatcccactattgat
ggtgaggaatctacgtgctactctgttgacccagtactgaaatgtatgaaagactgtact
ccaatcgaaaaagcttcagtaaaggttggcttccactgcttcccaaaagagactgctgta
agcctgttggaatggcagaaaagcagcgataagaaatctgcatttgaggatgttgtggag
tctgtggatgctgacattgattgtacctgcactggcagctgtagttaa
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integrated database retrieval system
