Hirundo rustica (Barn swallow): 120756732 Help Entry 120756732         CDS       T09369                                  Symbol COP1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism hrt  Hirundo rustica (Barn swallow) Pathway hrt04115   p53 signaling pathway hrt04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:hrt00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     120756732 (COP1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     120756732 (COP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:hrt04121]     120756732 (COP1) Enzymes [BR:hrt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120756732 (COP1) Ubiquitin system [BR:hrt04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120756732 (COP1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      120756732 (COP1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 zf-RING_2 zf-RING_UBOX Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING Motif Other DBs NCBI-GeneID:  120756732 NCBI-ProteinID:  XP_039929276 LinkDB All DBs Position 9:30676364..30801953 Genome browser AA seq 704 aa AA seqDB search MSGSRPPHPAVPPAATPASSSSSSSSSSSSSAAMAPGSSSSGGAAARPVMVAAAVSGSGP GLPRLAAGAARPGGSSAAPGGGGRKRPLLTPLCNGLINSYEDKSNDFVCPICFDMIEEAY MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSEEKRLKL DHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF LKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIID STEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRTTS QLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKV YEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSK VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSS RYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNV GKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVL DKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgtcgggcagccgcccgccgcaccccgccgtgccgcccgccgccacaccggcctcctct tcctcctcctcctcgtcctcctcctcctcttcggcggccatggcccccggctcgtcctcc tcgggcggcgcagcggcgcggcccgtgatggtggcggccgccgtgtcggggtcgggcccg gggctgccccggctggcggcgggggcggcgcggcccggcggctcctccgcggcgccgggg ggcggcggcaggaagaggccgctgctcaccccgctctgcaacggcctcattaactcctac gaggacaagagcaacgacttcgtgtgccctatctgttttgatatgattgaggaagcctac atgacgaaatgtggacacagcttctgctataaatgtattcaccagagcctggaggacaat aatagatgtcccaaatgcaactatgttgtggacaacatagatcatctttatcccaacttc ttagttaatgaattaattcttaaacagaagcagagatctgaggagaagagactcaaactg gaccattcagtgagtagcaccaatggccaccggtggcagataattcaagatttgttggga actgatcaagacaatcttgacttagccaatgtcaacctgatgctggagctgctggtgcaa aagaaaaagcagctggaagcagagtcccatgctgcccaattgcagatccttatggaattt ctcaaagttgccaggagaaacaaacgagagcaattggagcagatccagaaggagctaagt gttctggaagaagatattaaacgagtagaggagatgagtggcctgtactccccggtcagc gaggacagcacagtgccgcagtttgaggctccctcaccttcacacagtagtattattgac tccaccgagtatagccagcctccaggcttcagtggcagttctcagaccaaaaagcagccg tggtataacagcacgctcgcctcgcgacgcaagcgcctcacagctcattttgaggaccta gagcagtgctatttttccaccaggatgactcgtgtctcggatgacagcagaaccaccagc cagctggatgagtttcaggagtgtctctccaagttcacgcgctacaattcagtccgaccg ctggcaacgctgtcctacgccagtgacctctacaatggctccagcatagtatccagtatt gaattcgaccgagactgtgactactttgccatcgctggagtgacaaagaagattaaagtc tatgagtatggtacagtcattcaggatgcagtggatattcactaccctgagaatgaaatg acctgtaattccaaaatcagctgtatcagctggagtagttaccacaagaacctgctagcc agcagtgactatgaaggcaccgtcatcctttgggatggattcacgggacagagatccaag gtctaccaggagcatgagaaaaggtgctggagtgttgattttaacttgatggaccctaag ctattggcttcaggctctgatgatgccaaagtgaaactctggtctaccaacttggacaac tcagttgcgagcattgaggccaaggcaaatgtgtgttgtgtcaaattcagcccatcttct cggtatcacctagcttttggctgtgcagatcactgtgttcactactacgaccttcgcaac actaagcagcccatcatggtgttcaaagggcatcgcaaggccgtctcctatgcaaaattt gtcagcggggaagaaatcgtctctgcgtcgacagacagccagctgaagctgtggaacgta gggaagcctcactgcttgcgctccttcaagggtcacatcaacgagaagaacttcgtaggg ctcgcgtccaacggagactacattgcctgtggaagtgaaaataattccctttacttatac tataagggcctctcaaagacactgctgacgttcaagtttgatacagtcaaaagcgtcctg gacaaggaccggaaagaagatgacacaaatgagtttgtgagcgccgtgtgctggagggca cttccagatggggagtccaacgtgcttattgctgctaacagtcagggtacaattaaggta ctggagctggtatga

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