Hirundo rustica (Barn swallow): 120756841
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Entry
120756841 CDS
T09369
Symbol
RNF220
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120756841 (RNF220)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120756841 (RNF220)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120756841 (RNF220)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
Rad50_zn_hook
Pox_A_type_inc
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
120756841
NCBI-ProteinID:
XP_039929504
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All DBs
Position
9:complement(9874170..10093840)
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AA seq
614 aa
AA seq
DB search
MDLHRAAFKMENSPYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSADKDVHI
PFTNGSYTFASMYHRQGGVPGAFANRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTDSPHLRFSDTDGKEYEFGTQLPSSSPGSLKVD
DTGKKIFAVSGLISDRETSSSPEDRSDRYRSDNQRGPQASATATHRMILTLPLCKKKATL
FDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKSSILKDAMAAGTPKSILLSASI
KREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSR
PLSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEG
GFRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALR
GAVLNGGTPSTRITPEFSKWASDEMPSTSNGESSKQETMQKTCKNSDIEKITEDSAVTTF
EALKARVRELERQLSRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQC
NTITSPGDLRRIYL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacttacaccgggcagcattcaagatggagaactcaccctatctccccaatccactg
gcctccccagcactaatggttctcgcctccactgctgaagccagccgtgatgcttccatt
ccctgccagcagccgaggccttttggggtccctgtgtcagcagacaaggacgtgcacatt
ccctttaccaatggctcatatacttttgcctccatgtaccaccgccaaggcggggtgcca
ggagcatttgcaaaccgtgactttcctccatccttgcttcaccttcacccccagtttgca
cccccaaacctggactgcaccccaatcagtatgttgaaccacagcggcgtcggggctttc
cgcccctttgcctccactgaagaccgggagagctaccagtcagcctttacaccggccaag
cgcctgaaaaactgccatgacactgactcaccccatctgcgcttctcggacactgatggg
aaggagtatgagtttggcacccagctcccctccagctcccctggctccctcaaagttgat
gatacagggaagaagatatttgctgtttctggcctcatttctgaccgtgagacctcatcc
agtcctgaagaccgaagtgacagatatagaagcgacaaccaaagagggccccaggcgtct
gcaactgccactcatcgtatgattttaactctccccctctgcaaaaagaaagcaactttg
tttgacagccaggctccgatctgccccatctgccaggtacttcttcgccccggggagttg
caggagcacatggagcaggagctggagaagctcacgcagctgaacatcagcaagagctcc
atcctgaaggatgccatggcagcaggcacccccaagtcaattttgttgtcggcctcaatc
aagcgggaaggagattctccgacagcatcaccccactcctcagatgacatccatcactca
gacagataccagaccttcctgcgggtgcgagcgaaccggcagacccggctgaacgctcgg
attggaaagatgaaacggaggaagcaagacgaagggcaggtatgtcccctctgcagccga
cctctgtcaggatccgaggaggagatgagtaggcatgtggaacaatgtcttgcaaagaga
gaaggttcgtgcatgactgaggatgactccgtggacatcgagaacgagaatggcaaccgc
tttgaggagtacgagtggtgcggtcagaagaggatacgggctaccactctcctggaggga
ggctttcgaggttctgggttcatcatgtgcagtgggaaggagaatccagacagtgatgct
gacctggatgtggatggagatgacacactcgaatatgggaaaccacagtacacagaggca
gacattatcccttgcactggagaagagccaggtgaagccaaagaaagggaggcgctccga
ggtgctgttctaaatggtggcacaccaagtactcgaataacaccggagttttctaaatgg
gccagtgatgaaatgccctcaacgagtaatggtgaaagcagtaaacaggagaccatgcag
aagacttgtaagaacagtgacattgaaaaaattacagaagactctgcagtgacaacattt
gaagcgttaaaggctcgtgtccgtgagttagaaaggcagctttcccgtggggaccgctat
aaatgtctcatttgcatggactcctacacaatgcccctgacttccattcagtgctggcat
gtgcactgtgaagaatgctggctgcggactctgggtgccaagaagctctgtcctcagtgt
aacaccatcacgtctcctggagaccttcggcgcatctacttatga
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