Hirundo rustica (Barn swallow): 120756888
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Entry
120756888 CDS
T09369
Symbol
USP24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120756888 (USP24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120756888 (USP24)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120756888 (USP24)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120756888 (USP24)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120756888 (USP24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120756888
NCBI-ProteinID:
XP_039929589
LinkDB
All DBs
Position
9:4738953..4800549
Genome browser
AA seq
2597 aa
AA seq
DB search
MESEEEQHMTTLLCMGFSDAAAIRKALRLAKNDINEAVALLTNERPGLHYGGYEPMESGQ
GPPGGHGSPAGGQGPRGGDGDGGGGGGGFDPPPAYHEVVETEKNDENGNCSGEGIEFPTT
NLYELESRVLTDHWSIPYKREESLGKCLIASTYLARLGLSDSDENCKRFMDRCMPEAFKK
LLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLGVLTMAFNPDNEYHFKN
RMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFAELGGFSAIQSKLNSEDI
ELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNVEEKDLKDKRLVSIPELLS
GIKLLCMRFQPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTVSKSVKNA
IDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWRIQSGQS
STVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARVET
TTGKVLEVLWDLAHLPTLPCSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIEDIKRSS
QHNNPQFVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLISCHRL
AASVAGPGGLVGATLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAREIWECLVTGQ
DVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFSLFKTFFENVNLC
DHRLKRQGTQLSVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLTPRLKKDS
VSLHKKFIADCYTRLEAASSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPYRSTKLV
IIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHLLTLNVTYESTKDTFTIEAHSNET
VGSVRWKIAKMLNSPVENIQIFANDSLLTVNKDQKLLHQLGFSDEQILTVKTSGSGTPSG
SSADSSTSSSNSSSVFSSSYAMEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITLRVRK
LLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQSSKSPSLSSKHQHQPSASSILESLFR
SFAPGMSTFRVLYNLEVLSSKLMPTADDEMARNCAKSFCENFLRAGGLSLVVNVMQRDSI
PSEVDYETRQGVYSICLQLARFLLVGQTMPTLLDEDFIKDGVEALSSRPFRNVSRQASRQ
MSICGTPEKSSYRQLSVSDRSSIRVEEIIPAARVAIQTMEVNDFTSTVACFMRLSWAAAA
GRLDLVGSSQPIKDSNTLFPAGIRNRLSSSGSNCSSGSEGEPTALHAGICVRQQSVSTKD
ALIAGEALSLLVTCLQLRSQQLGSFYNLPCVADFIIDILLGSPSAEIRRVACDQLYTLSQ
TDTSAHPDVQKPNQFLLSVVLGAQLPLWSPTSIMRGINQRLLSQCTEYFDLRCQLLDDLT
SSEMEQLKISPAAMLEDEITWLDNFEPNRTAECETSEADNILLAGHLRLIKTLLSLCGAE
KEMVGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPKCSTADSRLAAYEVLVM
LADSSPSNLQLITKELLSMHHQCDPALTKEFDYLPPVDSRSISGFVGLKNGGATCYMNAV
FQQLYMQPGLPEALLSIDDDTDNPDDNVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWN
KELYVREQQDAYEFFTSLIDQMDEYLKKIGRDQIFKNTFQGIFSDQKICKDCPHRYEREE
AFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYCEKCEEKRTTVKRTCIKVLPSLLVI
HLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSTDQGGGGS
PRKKVAPTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVVEEFDLTDET
LEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEA
EDLSLSAPSSPEISPQSSPRPHRPNSDRLSILTKLVRKGEKKGLFVEKMPVRIYQMVRDE
NLKFMKNRDVYSSDYFSFVLSLASLNATKVKHPYYPCMAKVSLQLAVQFLFQTYLRTKKK
LRADTEEWIATIDALLSKSIDACQWLVEYFVGPEGRELVKTFLLECSVREVRVAVATILE
KTLDSALLYQEKLKTLHQLLEVLLALLDKDVPENCKNCAQYFLLFNNFVQKQGIRASSLL
LRHSALRHMVNFLLGPNRQSNQNRRWSSAQAREFGYLHNTVALLVLHSDVSSQRNVAPGL
FKQRPPLSITASGPLLALHEEVEALLFLSEGKPYLMEVMHALRELTGSLSVLIEMVVYCC
FCNEHFSFTVLHFIKTQLETAPPHELKNIFQLLHEILVIEDPLQVERIKFAFETENGLIA
LMHHSNHVDSSRCYQCVKFLVTLAQKCPTAKDYFKENSHHWSWAVQWLQKKMSEHYWAPQ
SNVSNETSTAKTFQRTISAQDTLAYATALLNEKDQSGSSNGSESSPANENGERHLQQGSE
SPMMIGEPKSDLDDVDP
NT seq
7794 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaggaggagcagcacatgaccacgctgctctgcatgggcttctcggacgcg
gccgccatccgcaaggccctgcgcctggccaagaacgacatcaacgaggccgtggcgctg
ctcaccaacgagcggcccggcctccactacggcggctacgagcccatggagagcgggcag
ggcccgccgggcgggcacggctcccccgccggcgggcagggcccccgcggcggcgacggg
gacggcggaggcggcgggggcggcttcgaccccccgcccgcctaccacgaagtggtggag
accgagaaaaatgatgaaaatgggaattgctctggtgaagggattgagtttccaacaacc
aacttgtatgaactggagagcagagttttgacagatcactggtccataccctacaagcgg
gaggagtctctaggcaagtgcctaattgcatccacctacctggcaagactgggtctttct
gattccgatgagaattgcaagaggtttatggacagatgcatgcctgaagcatttaagaag
ctgttgacatccagtgctgttcacaagtggggaaccgaaatccatgaaggaatttacaac
atgctcatgctgctggtggacctggttgcagaaagagtaaaacaagatcctatccctgtg
ggcctgcttggtgtgcttacaatggcatttaatcccgacaatgaatatcatttcaagaat
cgaatgaaggtgtgccagagaaactgggcagaagtctttggggaggggaacatgcatgct
gtctcacccatatccacttttcagaaggaacctcatgggtggctggtggatctggtaaac
aggtttgcggagttgggtggattttctgcaattcagtccaaactcaattctgaagatatt
gaacttggggccatctctgcattagttcagccatttggagtttgtgcagaatatcttaac
tcttctgtagtacagcccatgctggatccagtcattcataaaatgataaaatacgtacag
aatgtagaagagaaggacttgaaagacaagagactggtgagcatccccgagctcttgtct
gggatcaaactgctgtgtatgcgcttccagcccgacctggtcacggcggtcgacgacttg
cggctggacattctgctgcgcatgttgaaatcccctcacttcagtgcaaaaatgaactcc
ctcaaagaagtaacgaaattaatagaagacagcactgtgtccaagtcagtgaagaatgca
atagacacagaccgactgctaaattggctcgtggagaattcagtcctgtcgattgctctg
gaaggtaatatagaccaagcgcaatactgtgatcgtataaagggaattattgaactgctg
ggcagtaaattatctttagatgagcttactaaaatttggagaattcagtcaggacaatcc
tccactgtgattgagaacatacataccattattgctgcagctgctgtgaagttcagctct
gatcagctcaaccatttatttgttctaatccaaaagagctgggagacggagagtgaccga
gtgaggcagaagctgctgagcctcattgggcgcattggccgagaggcacgagtggaaaca
accactggcaaggttctggaggtactttgggacctggctcaccttccaacgttaccgtgt
agtcttatccagcaggccttggaggaacacctgacaatcctcagtgatgcttatgcggtg
aaagaggcaatcaaaaggagctacatcatcaaatgcatagaggatattaagaggtcatcc
cagcacaataatcctcagtttgtgtgggtggtgccagccttgcgtcagctccacgaaatc
acgcgttcatttattaagcaaacttaccaaaaacaagacaagagcattatccaagattta
aagaaaaactttgaaatcgtgaagttggtgacaggaagcctgatatcctgtcaccgtttg
gctgcatctgtggcaggcccaggagggctggtgggagcaacactggtggatggccgatac
acttaccgagagtatttggaggcacatctaaaatttttggcattttttctgcaagaagcc
accctttatttgggctggaatcgtgccagggagatctgggaatgccttgtaaccggccaa
gatgtttgtgagttggaccgagagatgtgctttgagtggtttacaaaagggcagcatgat
ctggagagtgatgtgcagcaacagctcttcaaagagaaaattcttaaactggaatcatat
gaaattaccatgaacggttttagtttatttaagacattctttgaaaatgtgaacctgtgt
gatcatcggctgaagaggcaaggaactcaactgagtgtagaaaaactggaattaatagga
atggatttcatttggaagattgcaatggagtcaccagatgaagaaattgccaatgaagct
attcaactgataataaattacagctatattaatctgactcccagattgaaaaaggattca
gtatcactgcacaagaaattcattgctgattgctacacgcgattagaggcagccagctct
gcgctcggcggtccaacgttaacacacgctgtcacgagagctacaaaaatgcttacagca
actgccatgcctacagtggcaacatcagtgcagtctccttacaggtcaactaaacttgta
ataattgagagactgctgctgttggcagagcgttacgtgataacaatagaggacctttac
tctgttccccgaactattctacctcatggtgcctctttccatggacatcttttaaccctt
aatgttacatatgagtctaccaaagataccttcaccattgaggctcatagcaatgaaacc
gtaggaagcgtcaggtggaagatagcaaagatgttgaattcacctgtggaaaatatacag
atatttgccaatgacagcctgctaacagtcaacaaagatcagaaactacttcaccagctg
ggcttctctgatgaacaaatccttacagtaaaaacatcaggaagtgggactccctcaggg
agctctgcagattcctcaaccagttccagcaacagcagcagtgtatttagttcatcctat
gcaatggaacaggagaaatccctccctggagtcgtcatggctctcgtgtgtaatgtgttt
gacatgctttaccagcttgccaacctggaggagccaaggataacactgagagtgaggaaa
cttctgctcctgattcccactgacccagctattcaggaggctcttgatcagcttgattcc
ctaggaaggaagaaaacactgctttcagaatccagttctcagtcctcaaaatccccatcc
ttgtcttcaaaacaccaacatcagcccagtgccagttcaatactagaaagtcttttcaga
tcttttgctccaggcatgtccacgttcagagtgctctacaatttagaggtgctgagctcc
aagctgatgccaactgcagatgatgaaatggcaagaaactgtgccaagtctttctgtgaa
aacttcctcagagcaggaggtttgagtttggtggtgaatgtgatgcagagagattccatc
ccgtcagaggtggactatgaaacacgacaaggagtctattccatctgcctgcagcttgca
aggttcttgctggttggccagacaatgcccacgctgctggatgaggatttcattaaggat
ggggtggaagctctgtcctcgcgacccttccgcaacgtgagccgccaggcgagcaggcag
atgtccatctgtggaacccctgagaagtcctcctaccgccagctctctgtgtctgacaga
tcctccatcagggtagaggaaatcatcccagctgccagagttgccatacaaaccatggag
gtgaatgatttcacctccacagtggcttgtttcatgcgcctctcgtgggctgctgctgca
ggacgcctggacctcgtgggaagcagtcagcccatcaaagacagcaacactctctttcct
gctgggattagaaacagacttagcagctcagggagtaactgcagttctggaagcgaaggg
gagcccacggcgctgcacgctgggatctgtgtgaggcagcagtctgtgtccaccaaagat
gctctcattgctggggaagccttgtctctcttagtgacctgccttcagctgcgtagtcag
cagctaggatctttttacaatttgccttgtgttgctgatttcatcattgatattctgctt
ggatcaccaagtgctgagattcgtcgcgttgcctgtgaccagttgtacacccttagccag
acggacacatcggctcacccagatgtgcaaaagccaaaccagttcctcctgagcgttgtt
cttggggcccagctgcctctctggtcaccaaccagcatcatgagaggaatcaaccagaga
cttttgtcccagtgtacagaatattttgacctgagatgtcagttactggacgacctgaca
tcatcagaaatggagcagctgaagataagcccagctgccatgttggaagatgagatcact
tggctggacaacttcgagcccaaccgcacggccgaatgcgagactagtgaggctgataac
atcctgttagcaggacacttgaggctcatcaagactctcctttcactctgtggggcagag
aaggaaatggttggttcatctttgattaagccattgttggatgatttcctgttccgagca
tcccggattattctgaacagccattccccagcaggcagcgctgcaatcagtcagcaagac
ttccatccaaagtgcagtacagcagacagcagattagctgcttatgaagtgctggtaatg
ctggctgatagctcgccctccaatctccagcttattacaaaggagctgctttctatgcac
caccagtgtgaccctgccctcaccaaggagtttgattaccttccaccagtggacagtcgc
tccatttctggatttgtgggactgaagaatggtggtgctacttgttacatgaatgctgtt
ttccagcagctgtatatgcagcctggtctccctgaggccttgctttccattgatgatgat
acagacaatcctgatgacaatgtgttctatcaagttcaatctctttttggtcatttgatg
gaaagcaagctacagtattatgtacctgagaacttttggaagattttcaagatgtggaat
aaggaactttatgttagagagcaacaggatgcttatgagttcttcaccagtcttatagat
caaatggatgagtacctcaagaaaataggaagagaccaaatatttaagaatacttttcaa
ggaatcttctctgatcagaagatctgcaaggactgccctcacaggtatgagcgtgaggaa
gccttcatggctctcaaccttggtgtgacttcatgtcaaagcctggaaatatcactggat
cagtttgtgagaggagaggtgctggaaggaagcaatgcatactactgtgaaaagtgcgaa
gaaaagagaactacagtgaagcgtacctgcattaaagtcttaccaagcctgctggtgatt
cacctgatgagatttggctttgactgggagagcggccgttctattaaatacgatgaacaa
ataaggtttccgtggatgctgaacatggaaccttacactgtgtcggggatggctcgtcag
gactcgtcctcagaagtgggggaaaacggcaggagcacagaccagggaggaggaggctcc
ccgaggaagaaagttgcccctacagaaaactacgagctggtcggtgtgattgtccacagt
ggccaggctcatgcagggcactactactccttcatcaaggacaggagaggatgtggaaaa
ggaaagtggtataaatttaatgacaccgttgttgaagagtttgatttgactgatgaaacc
ctggaatatgaatgttttggtggagagtatagacctaaagtctatgatcaatcaaatccc
taccccgacgtgcgccggcgctactggaatgcctacatgctgttctaccagagagtgtcc
gaccagaactctcctgtgctgccaaagaaaagcagagtcagtgtcgtgcgccaggaagct
gaggacctctccttatctgctccctcttcaccagaaatttccccccagtcatcacctcga
ccccacaggcccaacagtgaccgtctctccatcttgactaagctggttcgaaaaggagag
aagaagggactctttgtagagaaaatgcccgtgcggatatatcagatggtgagagatgaa
aacttgaaatttatgaagaacagagatgtatacagtagtgactacttcagttttgttctg
tcattagcttccctgaatgctactaaggtaaaacacccctattatccctgcatggcaaag
gtgagcttacagctggcagtccaattcctcttccaaacctatctccgaaccaagaagaaa
ctcagggctgacacagaagaatggattgccaccatcgatgcactgctctccaaaagcatt
gatgcttgtcagtggttggttgagtatttcgtggggccagagggccgggagcttgtaaag
actttcctcctggaatgcagcgtgagggaggtgcgagttgctgtggccacaatccttgag
aaaaccctcgacagtgccttgctttatcaggagaagttaaaaactctgcatcagttgctg
gaggtgctacttgctctactggataaagacgtacctgaaaactgtaaaaactgtgctcag
tactttttgctattcaataactttgttcagaagcagggaataagggctagcagtcttctc
ctcagacactctgccctgaggcacatggtcaactttctccttggccccaaccggcagagc
aatcagaaccgcaggtggagttcggcacaggcacgggagtttggatatcttcacaacact
gtagcactacttgtcttgcactctgacgtctcctcacaaagaaatgttgctcctggtctc
tttaagcagcgtccacctctcagcatcaccgcttcagggccgcttctggcactccatgaa
gaggtggaagccttgctgttcctttctgagggaaaaccctacttaatggaggtgatgcac
gcgctgcgggagctcacggggtcgctgtcggtgctcatcgagatggtggtgtactgctgc
ttctgcaacgagcacttctccttcactgtgctgcacttcatcaagactcagctggagact
gctcctcctcatgaattgaagaacatattccagttgctccatgagatcctggttattgaa
gacccattacaagtagagcgcatcaaatttgcctttgaaactgaaaatggattaatagcc
ttgatgcaccacagcaaccacgtggacagcagccgttgctaccagtgtgtcaagttcctg
gttactctggctcagaagtgccctactgcaaaagattacttcaaggagaattctcaccac
tggagctgggctgtgcagtggctccagaaaaagatgtctgaacattactgggctccccag
agtaacgtgtccaatgaaacatccactgcaaaaaccttccagcgcactatttcagcacag
gacactctggcctatgccacagccctgctgaatgagaaggatcagtctggaagcagcaat
gggtcagagagcagccctgccaacgagaacggagagaggcacctgcagcagggctcagag
tctcctatgatgattggggagcctaaaagtgaccttgatgacgttgacccttag
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integrated database retrieval system
