Hirundo rustica (Barn swallow): 120756930
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Entry
120756930 CDS
T09369
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120756930 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120756930 (RUBCN)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Other autophagy associated proteins
Others
120756930 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
120756930
NCBI-ProteinID:
XP_039929660
LinkDB
All DBs
Position
10:complement(16195377..16225980)
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AA seq
1048 aa
AA seq
DB search
MRRGCSRRAHVLRGKEHWKLLGNLKTTVEGLVSISNPNVWSKYGGLERLCRDMHSILYHG
LIHDKVCCRQKDYWQFVKDFRWLSPGSAHHLEKFISLQESGQRDPEGAGDQAIAQLWLQH
SLQCHCLSAQLRPLLGNRQYIRKFYTDTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDT
SMLAGTSLPSLCASDPSAGTREMCDGSGEGHKGRLPGALGCLDHFSESLLTRKSDNPSPV
TKSQSLTALAASPCVPAATCTQQRCFGSFSSLQHPASSGLSDRRPVSSCSSSNSSQAQER
CPSTRSSSFSEGRSPLEQPNSVTRFHVPSSKDPFSPASEMSSSTTSQSEDTWTGSQDDPQ
SDVNDGPEYLAIGNLGRRGRACSSTSSSSTKSSSSKLFSSSSSQKLDSVSSLGEQGASGG
GSRGLSLLRRSSFSEGQSSAPQGILKKSHVRSHSDTNVTSGKLHGGLRDITIIIEDPVAE
SHGDPSGGRGPVSASTQSSELSTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQ
DFGSCADLEKENAHFSISESLIAAIELMKCNMMSRQLEEEEEDSDKEIQELKQKIRIRRQ
QIRTRHLFPTCQEMGSDGLLATDSGSQFSSHGSMRLSDSGSAEDVEEYEIRDGNDGSNLI
QMSKSGLSVSMASLFSDADIKRNPDSSRRSFLSSDSVSHSFLNSNSAEAVAMGLLKQFEG
MQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQ
IIFNVHSAPARKVAVAKQNYRCAGCGIRTDPDYIKRMRYCEYLGRYFCQCCHENAQTIIP
SHILRKWDFSKYYVSNFSKDLLSKIWSDPLFNVQAINPALYQKVKALNQVRLLRIQLFHM
KNMFKTCRLAKDLLDSFDTVPGHLTEDLHLYSLSDFSAIKKGDLMPRLAELLKAGSLHID
KCMLCQAKGFICEFCQNEDDIIFPFELNKCKTCEECKACYHKSCFKSTHCPRCERLQARR
ELMDKQSSESYISDCDDELEQPQAAAAT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggggatgctcccggagggctcacgtccttcgtgggaaggagcactggaagctc
cttggcaacctgaagaccacagtggaaggtttggtgtccataagcaacccaaatgtctgg
tccaagtatggcggcttggaacggctctgcagagacatgcacagcatcctctaccatggg
ctcatccatgacaaggtgtgctgcagacagaaggattactggcagtttgtgaaggacttt
cgctggctgagtccaggctctgctcatcacctggagaagttcatcagcctgcaggagagc
ggccagcgtgaccccgagggcgcaggggaccaggccattgcgcagctgtggctgcagcac
agcctgcagtgccactgcctgtcagcacagctgaggccgctcctggggaaccggcagtac
attcgcaagttctacacagatactgccttccttctcagtgacgcccacgtcacggccatg
ctgcagtgcctggaagctgttgagcagaacaaccccaggcttctggctcagatcgacacc
tccatgctggccggcacgtcactgccatccctgtgcgcgtcagatccttctgctgggaca
agagagatgtgtgatggcagtggtgagggacacaaaggccgtctgccgggagcgctgggc
tgcctggatcatttctctgagagcctgcttaccaggaagagtgacaatccgtctccagtg
accaagagtcagagcctgactgccctcgctgcatctccctgtgtccctgctgccacctgc
acacagcaacgctgctttgggtctttctccagcctccaacatccagcctcctctggcctc
tcagacaggagaccagtgagttcctgtagcagctccaactccagccaggctcaggagcgc
tgcccgtccacccggtcctcctccttcagcgagggcagatcccctctggagcagcccaac
tctgtcacccgcttccacgtcccctcatccaaagaccccttctctccagccagcgagatg
agctccagcaccaccagccagagcgaggatacttggacagggagtcaggatgatccacag
agtgatgttaatgatgggccagagtacctggccattgggaacttgggacgccggggccgg
gcatgcagcagcaccagcagcagcagcaccaagagcagtagctccaaactcttctcctcc
agcagctcccagaagctggactcagtgtcatccctgggggagcagggggcaagtggaggt
ggcagcaggggcctgagcctgttgcgtcggtccagcttctcagagggacagtcttcagct
ccacagggcatcctcaagaagagccacgtgcgctcacactctgacaccaatgtgacttct
gggaagttgcacggaggcctcagggatatcaccattataatagaagatccagtggcagag
tcccatggtgatccaagtggagggagagggccggtctctgcttccacacagagcagtgaa
ctgagcacacccagctccctctacatggagtatgactctggacagtacctgagctcgggg
gaagggatgttcaggagaccttcagaagggcagtccctcatcagctacctctctgagcag
gactttggcagctgtgcagacctggagaaggagaacgcccacttcagcatctcagaatcc
ctgatcgctgccattgagctgatgaagtgcaacatgatgagccggcagctggaggaggag
gaagaagacagtgacaaggagatccaggagcttaaacaaaagattcgcattcggcgccag
cagatccgcaccaggcacctgttccctacctgccaggagatgggctcagacggtctcctg
gcaacagacagtgggtcccagttcagctcccacggctccatgcggctctctgactctggc
tctgccgaggatgtggaagagtatgagatccgagatggtaacgatggatctaacctgatt
caaatgtccaagagcggcctctcagtgtcaatggcttccttgttctcagatgcagacatc
aagaggaacccagactccagcaggaggtcttttctctcctcggactccgtatcccactcc
ttcctcaattcaaactcggcagaggcagtggccatgggcttgctgaagcagtttgagggc
atgcagctcccagctgcctctgaattggagtggctggtccctgagcatgacgccccacag
aagctcctgcccatccctgactctctgcctatctctcccgacgacggagagcatgccgac
atctacaagctgaggattcgggtgcgcggaaacctggagtgggccccgccgcgaccgcag
atcatcttcaacgttcactcagccccggcgaggaaggtggctgtggccaagcagaattac
cggtgtgcaggctgtggcatccggactgatcctgattacatcaagcggatgcggtactgc
gagtacctgggcaggtatttctgccagtgctgccatgagaacgcccagaccatcatcccc
agccacatcctgcgcaagtgggacttcagcaagtactatgtgagcaacttctccaaagac
ctgctgagcaagatctggagtgacccactctttaacgtgcaagctatcaatcctgccctg
taccagaaagtgaaggctctcaaccaagtgcggctgctgcgaatccagcttttccacatg
aagaacatgttcaagacgtgccggctcgctaaagacctcctggactcctttgacacagtg
cccggccacttgacagaggatttgcacctctactcgctgagtgacttcagtgccatcaag
aaaggggacctgatgcctcgcctggcagagctcctgaaggcaggcagcctgcacattgac
aagtgtatgctgtgccaagccaaaggcttcatctgtgagttctgccagaatgaggatgac
atcatcttcccctttgagctcaacaagtgcaaaacatgtgaagagtgcaaagcctgctac
cacaaatcctgcttcaaatccacccactgtccccgctgcgagcgtcttcaggcccggagg
gagctgatggacaagcagagctctgagtcctacatctcggactgcgacgacgagctggag
cagccgcaggcagcggcggccacatga
DBGET
integrated database retrieval system
