Hirundo rustica (Barn swallow): 120756954
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Entry
120756954 CDS
T09369
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120756954 (GIGYF2)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120756954 (GIGYF2)
Surveillance factors
Other surveillance factors
120756954 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
120756954
NCBI-ProteinID:
XP_058277857
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All DBs
Position
10:6559149..6633816
Genome browser
AA seq
1310 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVTSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPRGRS
SSRGRGRGRGESGFYQRSFDEVEGGFGRGGGREMHRSQSWEERGDRRFEKPGRKDPVRPN
FEEGGTVPAGRKHEFIRSESENWRIFREEQNGEDEDGGWRLAGSRRDGERWRPHSPDGPH
SAGWREHMERRRRFEFDFRDRDDERGYRRVRCGSGSMDDDRDSLPEWCLEDAEEEMGTFD
SSGAFLSLKKVQKEPIPEEQEMDFRPVEEGEERSDSEGSHNEEAKDHEKTKKEGEKTERV
VAEAVEEAAQASSPAARSDTPPKSQPPDPLQTNLFERKEESVPERTEKTEDKENRVENTL
SAKMSNRGEDLASLAQPLPQISADTAASAHLPPPVSNSNPALRPVQTPVTAAPGMGNIPT
DPDDEEGLKHLEQQAEKMVAYLQDSALDDERLAAKIQEHRAKGSSMPLFHEAMQKWYYKD
PQGEIQGPFSNQEMAEWFQAGYFTMSLLVKRACDETFQPLGDIMKMWGRVPFTPGPAPLP
HLGELDQERLTRQQELALIQMQHLQYQHLLIQQQYAQMLAQQQKAALSSQQQQQLAILLQ
QFQALKMRISEQNMMPPVTRSVSVPDTGSIWELQSASQPTVWEGSSVWDLPIDTAAQGPA
LEQLQQLEKAKAAKLEQERREVEMRAKREEEERKRQEELRRQQEELLRRQQEDERKRREE
EELARRKQEMTVRAERGEAVDLICLDFRKAFDVILHKRLVYKEEALRRQREQEIALRRQR
EEEERQQQEEALRRLEERRREEEERRQREELIRKQEEEAAKWAREEEEAQRRLEESRLRM
EEEAARQRLEEEERKRKELELQRQKEIMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSST
WGQQSNSGACQSQTTLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSG
WGNVTKPTGTTKSLLEIQQEEARQMQKQQQQQHQQPNRVRNTTHSNLHTSIGNSVWGSLN
TNPSNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKSNASLSKSVGITSR
QNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEV
HDYIRAYLGDTPEAKEFAKQFLERRAKQKASQQRQQQQQDSVWGMNHSSLHSVFQTNQSN
NQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLEDY
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaactcagacacttaactttgggcctgaatggctgcgagctttgtctagt
ggcgggagtgtgacatcccctcctctgtctccggctttgccgaagtacaaactagcagac
tatcgctatgggagagaagaaatgttggcactttttctaaaggataataagataccttca
gaccttctggataaagaatttttgcctattttacaagaggagcccctgccaccactggca
cttgtaccttttacagaagaagaacagagaaatttctcgatgtctgtaaacagtgctgct
gtcctgcggttgacgggacgtggaggaggaacggtggtgggggctcctcgaggtcgaagt
tcctctcgaggtcgaggcagaggccgaggagaaagcggtttctaccaaagaagttttgat
gaagtggagggtggatttgggcgaggagggggcagggaaatgcacagatcacagagttgg
gaggaaaggggagacagacgctttgaaaaaccagggcgaaaagatccagtgagaccaaac
tttgaggaaggtgggacagtgcccgcggggaggaaacacgaatttatacgctctgagagc
gagaactggcgcatcttcagggaggaacagaatggggaagatgaggatggaggctggcga
ctggctgggtcacggagggatggggagaggtggcgtcctcacagtccagacggccctcat
tccgcaggctggcgggagcacatggagcgacggcggagattcgagtttgatttccgggac
cgggacgacgagcggggctatcggcgcgtgcgctgcggcagcggcagcatggacgacgac
agggacagtctccctgagtggtgcttggaggatgcggaggaagaaatgggcaccttcgac
tcctctggagcgtttctctctttaaagaaggtgcagaaggagccaataccagaggaacag
gagatggatttccggcccgtggaggagggggaggaaaggtctgattctgaagggagccac
aacgaagaagccaaagatcacgaaaagaccaagaaagagggggagaaaacagaaagagta
gtggcagaagcggtggaagaagcagctcaggcatcatctccagctgccaggtcagacacc
ccaccgaaatctcagcctccagacccgctgcagacaaacctttttgaaaggaaggaggag
tctgtgccagaaagaacagaaaaaacagaagataaggagaatcgagtggagaatacactg
tcagccaaaatgtccaacagaggggaagatttggcttctcttgctcaacctttgccacag
atttctgcagacacagctgcttctgctcatcttcctcctcctgtttccaattcaaatcct
gctctgcggccagttcaaacacctgtcacagctgctccaggcatgggcaacattcccact
gacccagatgatgaagagggcctcaaacacctagagcagcaagcagaaaaaatggtggca
tatctgcaggacagtgcccttgatgatgaaagactagcagcaaaaatccaagagcacaga
gcaaagggttcctctatgcccctattccatgaagccatgcagaagtggtactacaaagat
ccacaaggagaaattcagggtccgttcagtaatcaggagatggcagagtggttccaggct
ggatacttcacgatgtcactgttggtcaagagagcctgtgatgagactttccagccgctt
ggagacatcatgaaaatgtggggcagggttcccttcactccaggcccagcaccgcttccg
catctgggtgagctggaccaagagcgactgactagacaacaggagttggctctgatccag
atgcagcacctgcagtatcagcatcttttaatacaacaacagtatgcacagatgctggct
cagcagcagaaggcagccctctcatcccagcagcagcagcagcttgctattctccttcaa
cagttccaggccctgaagatgagaatatctgaacagaacatgatgccacctgttacaagg
tctgtgtcagtgccggacactggctcaatatgggaacttcagtcagcttcacagcctaca
gtctgggaaggaagcagtgtctgggatctgcccattgatactgcagctcagggaccagct
ctagaacaacttcagcagctcgagaaggccaaggctgcaaagctagagcaagagaggaga
gaagtggaaatgagggccaaacgagaggaagaggagaggaaaaggcaggaggagcttcgg
aggcaacaagaagagctacttaggaggcagcaggaagatgagaggaaacgacgggaagaa
gaagaactggcccgcaggaagcaagagatgacagtgagagctgagaggggtgaagcagta
gacttaatctgcctggacttcaggaaggcttttgatgtaatactgcataaaagactagta
tataaggaggaggccctgaggcgacaacgagagcaggaaattgcactaaggcggcagagg
gaggaagaggagaggcaacaacaggaggaagcacttaggagattggaggagagaagaaga
gaggaggaggaaagacgtcaacgagaggagttaattcgtaaacaggaagaggaggctgcc
aagtgggcgcgtgaagaggaggaagctcagcggcggctggaggagagccggctgcgcatg
gaggaggaggcggcccggcagcggctggaggaggaggagcgcaagcgcaaggagctggaa
ctccagcgccagaaggagatcatgaggcagaggcagcagcagcaggaggctttacggcgg
ctgcagcagcagcagcaacagcagcaacttgcacaaatgaagctcccttcatcttcaacg
tggggtcagcaatcaaattcaggagcttgtcaatcccagaccacactgtcattggccgaa
atacaaaagttagaagaagaaagagaacggcagctccgagaagagcaaaggcgtcagcag
cgtgaactaatgaaggcccttcagcaacaacagcagcaacagcagcaaaaattgtcaggc
tggggtaatgtcaccaaaccaacaggcaccaccaagtccctgctggagatacagcaggaa
gaggcaaggcagatgcagaaacagcagcaacagcagcaccagcagccgaacagagtcaga
aataccacgcactctaacctgcacaccagcattgggaattcagtgtggggctctctaaac
actaatcccagcaaccagtgggcatctgacctagtcagtagcatctggagtaatgccgat
accaaaaactcaaacatgggtttctgggatgatgcagtgaaggaagtgggacctcgtaac
tcgaccaataaaaataaaagcaatgccagcctcagtaaatctgtaggtattacaagtaga
caaaacaagaaggtagaagaagaggagaagctgttgaaattgttccagggggttaataaa
gcccaggatggattcactcagtggtgtgaacagatgcttcatgcactcaacacagccaac
aatttagatgttcccacgtttgtttctttcctgaaggaagtggagtctccctacgaggtc
catgactacatccgagcctaccttggagatactcccgaggccaaggagtttgccaagcag
ttcctcgagcgccgtgccaaacagaaagccagtcagcagcggcaacagcaacagcaggat
tcagtgtgggggatgaaccacagttcgctacattcagtctttcagaccaatcagagcaac
aaccagcagtccaactttgaggctgtgcagagcgggaagaaaaagaagaaacagaaaatg
gttcgagcagatcccagcttgttagggttttcagtgaatgcttcttcagagcggctcaat
atgggagaaatagagactttggaagactactga
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