Hirundo rustica (Barn swallow): 120756966
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Entry
120756966 CDS
T09369
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120756966 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120756966 (COPB2)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120756966 (COPB2)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120756966 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
120756966
NCBI-ProteinID:
XP_039929788
LinkDB
All DBs
Position
10:933989..947501
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKNFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAK
GFEPSGIVTSQKKAEEPVPSPKQEVMKTVVQNSDNLPARDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgactggatatcaagcggaagctgaccgcccgctctgaccgggtgaagagc
gtggacctgcatcccacagagccatggatgctggccagcctctacaacggcagtgtctgt
gtctggaaccacgaaacacagactctggtgaagaatttcgaagtatgtgacctgcccgtg
agagctgccaagttcgtggcgaggaagaactgggttgttactggagctgatgacatgcag
atcagagtttttaattacaacaccctggaaagagttcacatgtttgaggcccattccgac
tacatccgatgcattgcagtgcaccccacgcagcccttcatcctcacaagcagtgatgac
atgctgatcaaactctgggactgggataagaaatggtcttgttctcaggtgtttgaagga
cacacccattacgtcatgcagattgtcataaacccaaaagacaataaccagtttgccagt
gcctctttggataggacaattaaggtgtggcagcttgggtcatcctctcccaacttcacc
ttggaaggccacgagaaaggagtgaactgcattgactattacagtggtggggacaagcca
tacctcatttctggggcagatgaccgcctggtgaagatctgggactaccagaataaaacc
tgtgtccagacactggaaggccacgctcagaacgtgtcatgtgtcagcttccatccagag
ctgcccatcatcatcactggctctgaagatggcacggtgcggatctggcactccagcact
taccgcctggagagcaccctgaactacggcatggagagggtgtggtgtgtggccagcctg
aggggctccaacaacgtggctttgggatatgatgaaggcagcattattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattct
gaagtccaacaagctaacttgaaagcgatgggagatgctgaaatcaaagatggagagagg
ttgccactggctgtgaaggatatgggcagctgtgaaatctatcctcagacaatccagcac
aaccctaatggacggttcgtggtggtgtgtggtgatggtgaatacatcatctacacagcc
atggctctgaggaacaagagctttggttctgcacaggagttcgtttgggcacatgactct
tcagagtatgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagag
aagaagtcgttcaagcctgattttggagcagaaggcatttatggtggctttctgttggga
gtcagatctgttaatggcctggcattctatgactgggacaacactgagctgattcgcagg
attgaaatccagcccaaacatattttctggtctgactcgggtgagcttgtgtgcattgct
acagaagagtcattcttcattctcaagtacctgtcagaaaaagtggcagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcctttgaggttcttggtgagatc
caggagattgtgaaaaccggtctgtgggtgggtgactgctttatttacaccagttctgtg
aacaggctcaactactacgttggaggagagattgtcaccattgcccatctggacagaaca
atgtatctcctggggtatatccccaaagacaacaggctgtatttgggagataaagagcta
aacattgttagttactctttgctggtctcggtgctcgaatatcaaactgctgtgatgagg
agagatttcggcatggctgacaaagttcttcccacaatcccgaaagaacagagaaccagg
gtcgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagagcatcgttttgaacttgctcttcaacttggagaattaaaaatagcctatcagctt
gcagtagaagcagagtcagaacagaagtggaagcagcttgcagagcttgccatcagtaaa
tgccagtttggcttagcccaggagtgtctccaccatgcccaggactatggagggctgctg
ctcctagccacagcttcagggaatgccagcatggtgaacaagttggctgaaggtgcagaa
aaggatggcaagaataatgtggcatttatgagctacttcctgcagggaaagcttgattca
tgtttggaactcctgatcaaaactgggcgtctccctgaagctgctttccttgcacggacg
tatttgccaagccaagtttcaagggttgttaaactctggcgagagaacctctctaaagtc
aatcaaaaagctgctgagtcccttgctgatcctacagaatatgaaaatcttttccctgga
ttaaaggaagcttttgttgctgaagagtacgttaagcaaagtcttgctgacttgaggcca
gccagggaatacccccttgtcactccaaatgaagaaagaaatttacttgaagaagcaaaa
ggatttgagccctctggaattgtaacatctcagaaaaaggctgaagaaccagttccctct
cctaagcaagaagtcatgaagacagttgtgcagaattctgataaccttccagcaagagat
caaaagacactgctggacttggaagatgacttagataacttggatctggaggatattgat
accacagatatcaatctggatgaagagatcttagatgaatga
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