Hirundo rustica (Barn swallow): 120756979
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Entry
120756979 CDS
T09369
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrt03032
]
120756979 (TOP2B)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120756979 (TOP2B)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120756979 (TOP2B)
DNA replication proteins [BR:
hrt03032
]
Eukaryotic type
DNA Topoisomerases
120756979 (TOP2B)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
120756979 (TOP2B)
Centrosome formation proteins
Centriole proteins
120756979 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
DUF7180
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
120756979
NCBI-ProteinID:
XP_039929830
LinkDB
All DBs
Position
1:116945307..117005889
Genome browser
AA seq
1624 aa
AA seq
DB search
MAKSGGGGGGGGGGGGSGGLTWVTLFDNQMNASKKEDSESINKNDTSKKMSVERVYQKKT
QLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQR
DKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKV
TGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEPKIKHFEGDDYTCIT
FQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCKGVKVMLNGKKLPVNGFRSYVDLYVKDK
LDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLI
EVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQPKSFGSKCQLSEKF
FKAASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSLDCTLI
LTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQY
KKSYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIV
KASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILF
RYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDF
INKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYH
HGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLF
PSVDDNLLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRR
MLDGLDPHPMLPNYKNFKGTIQELGQNQYVVSGEIFVVDRNTVEITELPVRTWTQVYKEQ
VLEPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCN
SMVLFDHMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEK
IQGKITIENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNANDDASSASGATS
GPDFNYILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSPSDLWKEDLAAFVEELEKV
EAQEREDVLAGMVGKPIKGKVGKPKMKKLQLEETMPSPFGRRIVPQITSAMKADASRKLL
KKKKGETDSLAIKMEFDEEFGGVPAEGGGDDSLNASAAAAKTPKPKKEKKEPGARVRRTP
SSTKSSAKKVKKRNPWSDDESKSESDLEENEPVIIPRDSLLRRAAAERPKYTFDFSEEED
DADDDEDANNNNDLDELKVKASPVTNDREDEFVPSDSLEKDEYDFSPAKSKPSPDRKTSQ
AKKNQDFGNIFSFPSYSQKTDDDTTKLDSDDEDSAPVFSSSFAPKQAEKIPSKTVAAKKA
KLDAPPKPKRAPKAKKVETVNSDSDSEFGIPKKTAAPKGKGRGAKKRKASGSENEGEYNP
GKKTPKSTPSKKSKKAAFDQDSDVEIFQSGFASETAPKPRTGRARKEVKYFAESDEDDDF
DMFN
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtctggaggaggaggaggaggaggcggcggcggcggcggcagcgggggactg
acttgggtgacattatttgataatcagatgaatgcctcaaaaaaggaagactcagaaagc
attaataaaaatgacacttcaaagaagatgtctgttgagagagtttatcagaaaaagact
cagcttgagcacatcctcctccgtccagatacctacattgggtcagttgaacccttaact
cagttaatgtgggtttatgatgaagatgtaggaatgaattgcagagaagttacctttgtt
ccaggcttgtacaagatctttgatgaaattcttgtaaatgctgctgacaataagcagagg
gacaagaatatgacttgtattaaaatatccattgatccggaatcgaacattatcagcata
tggaataatggaaaagggataccagttgtggaacacaaagtagaaaaagtatatgtacct
gctttaatctttgggcagctactaacgtccagcaactatgatgatgatgagaaaaaagtc
acaggtggacgcaatggctatggtgcaaaactttgtaacatatttagtacaaagtttact
gttgaaactgcttgcaaggagtacaaacacagctttaaacagacttggatgaacaacatg
atgaagacctctgagcccaagattaagcattttgaaggtgatgactacacatgcattaca
ttccagccagatctgtctaaatttaaaatggaaaagcttgataaggatattgtggccctc
atgacaagacgagcatatgatttggctgggtcgtgcaaaggagtgaaagtcatgttgaat
gggaagaagctacctgtaaatggatttcgcagctacgtagatctttacgttaaggacaag
ctggatgaaaccggagtcgcgctcaaagtcatccacgaagtcgtgaatgaacggtgggat
gtgtgcctcactctgagtgaaaaagggttccagcagatcagctttgtaaatagtatagct
accacaaagggtggtaggcatgttgattatgtggtggatcaggttgtgggcaaactgata
gaagtggtgaaaaagaagaataaagctggagtttcagtcaaaccatttcaggtgaagaac
catatatgggtttttgttaattgcttgattgaaaacccatcatttgattcccagacaaag
gaaaacatgacattgcagcctaaaagttttgggtccaagtgccagctatctgagaaattt
tttaaagcagcctctaactgtggcatcatagagagtattttgaattgggtcaaatttaag
gcacaaactcaactgaacaaaaaatgttcatcagtgaaacacagtaaaatcaagggcatt
ccgaaactggatgatgctaatgatgctggtggcaaacattccttggactgcacgttgata
ttaacagaaggagactcagccaaatctttagctgtctctggcctaggtgttattggtaga
gacagatacggcgtcttcccactcaggggcaaaattctcaatgtccgagaagcttctcac
aagcagattatggaaaatgcagaaatcaacaacatcatcaaaatagttggattacagtac
aaaaaaagctatgaagatccagaatctctgaaaagtttgagatatggaaaaattatgatc
atgacagatcaggatcaggatggatctcacataaagggcttgttgatcaattttatacat
cacaattggccatcactgttgaaacatggttttctcgaggaattcatcacccctattgtg
aaggcaagcaaaaataagcaagaactttcattctatagtattcctgaatttgatgagtgg
aaaaagcatatggaaaatcataaagcatggaagataaaatactacaaaggattgggtacc
agcactgctaaagaagcaaaagaatattttgctgacatggaaagacatcggatcttgttt
cgatatgctgggcctgaggatgatgctgccattacactggccttcagtaagaagaagatt
gatgaccggaaagaatggttaacaaatttcatggaagacaggcgacagcgtcgactacac
ggccttcccgagcaatttttatatggtacagcaacaaaacatttgacttacaatgatttc
attaacaaggagttgatccttttctcaaattcagacaacgagagatctatcccttccctt
gttgatggtctgaaaccagggcaacgcaaggttctgttcacttgctttaagagaaacgat
aaacgtgaagtaaaggttgctcagctggctggttctgtggctgaaatgtcagcttatcac
catggggagcaagcattaatgatgactattgtcaacttggctcagaactttgttggaagt
aacaatgtgaatctgctgcagcctattggtcagtttggcaccaggctgcatggtggaaag
gatgctgccagccctcgttacattttcaccatgttaagccctttagcaaggctacttttt
ccatcagtggatgacaacttgcttaaattcctgtatgatgacaaccagcgtgtagagcct
gaatggtacattccaatcattcccatggtcttagtaaatggagctgaaggaattggtact
ggctgggcgtgcaaacttccaaactatgataccagagagattgtaaacaatgtcagacga
atgctggatggcctagatccccacccaatgctcccaaactacaaaaacttcaaaggaacc
attcaggaacttggtcaaaatcagtatgtagtgagtggtgagatatttgtggtggacagg
aatacagtagagattacagagcttcctgtaaggacatggacccaggtgtataaagaacag
gttctagaacctatgttgaatgggactgaaaaaactccagcattaatttctgactacaag
gaataccacactgatacaactgtgaaatttgttgtgaagatgaccgaagaaaagcttgca
caggcagaagctgctggattgcacaaagtctttaagcttcaaacaagtcttacttgtaat
tctatggtgctgtttgatcacatggggtgcttaaagaagtacgaaactgtgcaggacatc
ctgaaggagttctttgatctccggttgcattattacagcctgcgcaaggagtggctggtg
ggaatgctgggtgcagagtccaccaagctgaacaaccaagctcgtttcatcctggagaag
atacaagggaaaattaccattgagaacagatcaaaaagagatttgattcagatgttggtc
cagagaggttatgaatctgatccagtaaaagcctggaaagaagcacaggaaaaggcagca
gaagaggaggactctcagaatgcaaatgatgatgcttcctctgcttctggtgcaacctct
ggccctgacttcaactacattttgaacatgtccctgtggtcactcacaaaagagaaggtg
gaagagttgattaagcatagagattccaaggagagagaactaaatgatcttaaaaggaaa
tctccttcagatctctggaaagaagatctagcagcctttgttgaagagcttgaaaaagta
gaagcacaggaaagagaagatgttctggctggcatggttggcaaaccaataaaaggcaaa
gttggtaaacctaagatgaagaaactccagctggaagagaccatgccatcgccatttggc
agaagaatagttccacagattacatctgccatgaaagctgatgccagcaggaaattgctg
aaaaagaaaaagggtgaaactgattctctagcaataaaaatggaatttgatgaagagttt
ggtggtgtgccagctgagggtggtggggatgactcactgaatgcatcagctgcagcagct
aaaacccctaaacccaagaaagagaagaaggagcctggtgccagggtaagaaggacacca
tcatctaccaaatccagtgcaaaaaaagtgaagaaacgaaacccatggtcagatgatgaa
tccaagtctgaaagtgatttagaagaaaatgagcctgtgattattccaagagactctctg
cttaggagagctgcagctgagaggcccaagtacacttttgacttctcagaagaagaagac
gatgctgacgatgatgaggatgccaacaataacaacgatttggatgagctcaaagtaaaa
gcctctccagttacaaatgacagagaggatgagtttgttccctcagacagtttagaaaaa
gatgagtatgacttctccccagccaaatcaaagccatctccagatagaaaaacatctcaa
gccaagaaaaatcaagattttgggaacatcttctcttttccatcttactctcagaagaca
gatgatgatacaacaaaattggacagtgatgatgaggattctgctcctgttttctcatcg
tcttttgccccaaaacaagcagagaaaattccaagtaaaacagtagctgctaaaaaggca
aaactagatgcgccccctaagcctaaaagagctcccaaggccaagaaggtggaaactgtg
aactctgattccgattcagaatttggcattccaaagaagacggcagcacccaaagggaaa
ggcagaggggcaaagaaaaggaaagcatctggttcagaaaatgaaggcgaatacaaccct
gggaagaaaacgcccaagtccacaccaagcaagaaatccaagaaggctgcttttgaccag
gattctgatgtggaaatcttccagtcaggctttgcctctgaaactgccccaaagccacgg
acgggccgggctagaaaagaagtgaaatattttgcagagtctgatgaagatgatgatttt
gatatgtttaattaa
DBGET
integrated database retrieval system
