KEGG   Hirundo rustica (Barn swallow): 120757046
Entry
120757046         CDS       T09369                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03030  DNA replication
hrt03410  Base excision repair
hrt03420  Nucleotide excision repair
hrt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120757046 (RFC4)
   03410 Base excision repair
    120757046 (RFC4)
   03420 Nucleotide excision repair
    120757046 (RFC4)
   03430 Mismatch repair
    120757046 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrt03032]
    120757046 (RFC4)
   03036 Chromosome and associated proteins [BR:hrt03036]
    120757046 (RFC4)
   03400 DNA repair and recombination proteins [BR:hrt03400]
    120757046 (RFC4)
DNA replication proteins [BR:hrt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120757046 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120757046 (RFC4)
Chromosome and associated proteins [BR:hrt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120757046 (RFC4)
DNA repair and recombination proteins [BR:hrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120757046 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120757046 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 AAA_lid_RFC1 Rad17 AAA_16 AAA_11 AAA_22 AAA_30 SLFN-g3_helicase Mg_chelatase DUF815 AAA_14 AAA_24 RuvB_N AAA_19 AAA_5 TIP49_C AAA_23 AAA_28 DNAX_ATPase_lid ResIII AAA_7
Other DBs
NCBI-GeneID: 120757046
NCBI-ProteinID: XP_039930028
LinkDB
Position
10:complement(17711482..17723590)
AA seq 362 aa
MQAFLKGPASISTKPVAAREKSAAGSSGEGKRTKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDSIQQQRLLDVSEKEHVKISNEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIITEIAGVIPKETIDELLLGCQSGSFEKLEALAKNLINEGFA
VAQLVNQLHDTIVESEDYSDKQKSAIAEKLAEVDKCLADGADEFLQLMSLCALVMQQLTQ
NI
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccagcctctatcagcaccaagcccgtcgctgccagggaa
aagagcgcggccgggagcagcggggagggcaagaggaccaaacccatcccctgggtggag
aaatatcgccccaaaaacgtggatgaagtcgccttccaggacgaagttgtagctgtgctg
aagaagtccctggaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgctagagaactgtttgggcccgatttattccgg
caaagagtccttgagttaaatgcttctgatgagcgtgggatacaagtgattcgggaaaaa
gtgaaggcttttgctcagctaacggcatctggaagccgttcagatggtaaaatgtgtcct
ccttttaaaattgtgatcctggatgaagcagactctatgacttcagcagcccaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgtcttatctgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctttg
tctgacagtatccagcagcagaggttgttggatgtttctgagaaggagcatgtgaaaatc
agtaatgaggcagtatcgtacctggtcaaagtgtcagaaggggacttaagaaaagcaatt
acctttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagagaagataatc
actgaaattgctggggtcatccctaaagaaacaattgatgaactgctattgggctgccag
agtggttcctttgagaaactggaagccctagcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcatgacaccattgtggagagcgaagattacagcgac
aagcagaaatctgccatagctgagaagcttgcagaagtggataaatgcctggcagatggt
gctgatgaattcttgcagctgatgagcctctgtgcccttgtgatgcagcagctcacacag
aacatctga

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