Hirundo rustica (Barn swallow): 120757115
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Entry
120757115 CDS
T09369
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120757115 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120757115 (LIMD1)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120757115 (LIMD1)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120757115 (LIMD1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
120757115 (LIMD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
120757115
NCBI-ProteinID:
XP_039930169
LinkDB
All DBs
Position
1:complement(110101208..110134009)
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AA seq
593 aa
AA seq
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MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKAAGNNPEFEETRRVFATKMAKIHLQQQ
QQQQQEEMLMAAMNGGAAAFHPPRSSPPVARGSKPPPAAEGPRARPCEGGERGLGASGAR
AEAPGSQAGRRGWEEEPDRISRVGVSQPGAGRGEQQAGSPGDPQPCRGGQENGGEGRRGV
PGRDPMPAGQRSSSFSNAATPPAPSVGPEEPPPQQRSPSFSAPSAQPTRGFAGSAEPCGP
KAGGDGGQPWYQGVSLSFPPSSAPAAPGVEHQHAAAYPSPAGRFVAHGQNHRPASSGGSP
EPGSSRLASRGMVAPNAPQMLLPEGVSGPRSDSGHLDGSSTAKVKLPCQTLLPQPEQGPS
AAELKLEALTQRLEQEMDARPKADYFGTCVKCNKGVYGANQACQAMGNLYHDSCFTCGAC
SRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRC
VICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDY
HVECYHCEDCGLELNDEDGHRCYPLDEHLLCHSCHLKHIENGTTPAAAYQHHY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtacgacgatctgggtctggaagctagcaagttcatagaggacctcaacatg
tacgaggcctccaaggacggtctctttcgggtggacaaagctgccggcaacaaccccgag
ttcgaggagaccaggcgggtgttcgccaccaagatggccaagatccacctccagcagcag
cagcagcagcagcaggaggagatgctgatggccgcgatgaacggaggggctgccgccttc
catcccccccgcagcagcccgccggtggcgcggggttcgaagccgccccccgccgccgag
gggccgcgagcgaggccctgcgagggaggggagcggggcctcggagccagcggcgcacgt
gccgaggccccagggagccaggccgggcgccggggctgggaagaggagcccgacaggatc
tcccgagtgggggtctcgcagcctggcgcggggcgcggggagcaacaggctgggagcccc
ggcgacccccagccctgccgcggcgggcaggagaacggtggcgagggcaggagaggtgtc
ccgggccgcgacccgatgccagccggacagaggtcttcctccttctcaaacgccgcgacc
cccccggcaccctcagtggggccagaggagcccccgccgcagcagaggtccccatccttc
tcggcaccctcggcgcagcccactcgagggtttgcaggctccgctgagccctgcggaccc
aaagccggaggagatggcggccagccgtggtaccagggtgtctctctgtccttcccgccg
agctccgcacccgctgctcccggcgtggagcaccagcacgccgctgcctaccccagcccg
gccggtcgcttcgtggctcacggtcagaaccacaggcccgccagcagcggcgggagcccc
gagccgggctcgtcgcgcctggcctcgcgagggatggtggctcccaatgcgccgcagatg
cttttgccggagggcgtgagcgggccacggtcagactctgggcacttggatggctccagc
acagcaaaggtgaagctgccctgccagaccctccttccgcagccagagcaagggccgtcg
gcggccgagctgaagctggaggcgctgacccagcgcctggagcaggagatggatgctcgg
ccaaaggccgattactttggtacctgcgtgaagtgcaacaagggcgtgtatggagcaaac
caggcttgccaggccatgggcaacctctaccatgacagctgcttcacctgtggagcctgc
agtcgaaagctgagagggaaagccttttattttgtcaatggaaaggtgttctgtgaagaa
gacttcctgtattctggtttccagcagtcagctgacaggtgtttcatttgtggtcatttg
ataatggacatgatcctgcaggctctagggaaatcatatcatccgggctgtttccgatgt
gtcatctgcaacgagtgtctggatggggtaccattcactgtagactctgaaaacaaaatc
tactgtgtcagagattaccacaaagttttagctccaaagtgtgcagcgtgtggacttccc
attctgccctccgaggggtctgatgagaccattcgggttgtgtccatggacaaggactac
catgtggaatgttatcactgtgaggactgtgggttggaactgaacgatgaagacggacat
cgctgctacccactggatgaacatttgctttgtcactcctgtcacctgaaacacatagag
aatggcacaaccccagcagctgcctaccagcaccactattag
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