Hirundo rustica (Barn swallow): 120757160
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Entry
120757160 CDS
T09369
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120757160 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120757160 (DHX36)
03012 Translation factors [BR:
hrt03012
]
120757160 (DHX36)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120757160 (DHX36)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120757160 (DHX36)
Translation factors [BR:
hrt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120757160 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
Sir1
Motif
Other DBs
NCBI-GeneID:
120757160
NCBI-ProteinID:
XP_039930249
LinkDB
All DBs
Position
10:25107083..25123154
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGGDGGSASAASSSAGGPGGRGRHPSHLKGREIGMWYARKQGQK
NRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAKVKP
DAEKAPVRQRPTWEKTSLDLDVEYLCEKTEQDANLDEQLKEELMKKRSDPRYIEMQRFRE
KLPSYGMREELVKLINTNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYSPEKTDRRLHWRKGFMQGHVSRPEKEEKEEIYRQQWPG
YLRQLQGRYSASTIDALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLH
EILTSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR
KELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHL
LAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIENPHPVDWHDIKCRDTAVLTAIID
LITTQENEAVRNFAPRFQGERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccgcggccgcggccgtggccggggcggcgat
ggcggctccgcctccgccgcctcctcctcggccggcgggcccggcgggcggggacggcac
cccagccacctgaagggccgcgagatcgggatgtggtacgcccgcaagcagggccagaag
aaccgcgacgccgaccggcagcagagagctgttgtgcgcatggacgagcgcagggaagag
caaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaagccatg
tcctggtggtccggggatgaagaaggccctgctccagaacagcctgccaaagtgaaacca
gatgctgaaaaagctcctgtaagacagagaccaacctgggaaaaaacatccctggatttg
gatgtggagtatctctgtgaaaaaaccgagcaggatgctaatttagatgagcaacttaaa
gaagaattaatgaagaagagatctgatcccagatacattgaaatgcagagattccgagag
aagctgccctcatacgggatgagagaggagctcgtgaagctgatcaacaccaaccgcgtg
acggtgatcagcggcgagacgggctgcgggaaaaccacgcaggtgacgcagttcatcctg
gacgatcacatcgagcgcggcctgggctccacgtgccgcatcgtgtgcacccagccccgc
aggatcagcgccatctccgtggctgagagagtggctgctgagagggcagagggctgtggc
aacggcaggagcacgggctaccagatccgcctgcagagtcggttgccaaggaaacaaggt
tcaattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttg
tccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatcttcaatcggatgtt
ttaatgagcattattaaagatcttctgaatgttcgactggatctgaaagtcatactgatg
agtgctactttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcac
atccctgggttcacgttcccagtggtagaatatctgctggaagatgtcattgagaagttg
aggtacagcccggagaagacggaccgtcggctgcactggaggaagggcttcatgcagggc
cacgtgagccggccagagaaggaggagaaggaggagatctacaggcagcagtggccaggc
tacctaaggcagctgcagggcaggtactcagcaagtacaatcgatgccctggaaatgatg
gatgatgacaaggtggacctggaccttgtagcagcactgatcagacacatcgtgctggag
gaggaggatggtgcaattctggtgtttctgccaggctgggataacatcagcactttgcat
gagatcttgacgtctcaagtcatgtttaagtcagataggtttcttatcatacctttgcat
tcactgatgcctactgttaaccagactcaggtgttcaagaagaccccaccaggagtgagg
aaaattgtgattgcaaccaatattgcagagaccagcatcacaatcgatgacgtcgtgttt
gttatagatggggggaagataaaggagactcactttgacacgcagaacaacatcagcacc
atggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagctgggagg
gttcagccaggccactgttaccatctgtacaacggactgcgtgccagccttctggatgat
tatcagttaccagagatcctgaggacacccttggaggaactctgcttacaaatcaagatc
ctgaagcttggtggaattgcctattttctgagcaaactgatggaccccccgtctcgtgac
gctgtgatgctggccataaatcacctcatggagctgaacgctctggacaggcaggaggag
ctgactcccctgggtgtccacctggcacggctgcccgtggagccgcacatcgggaagatg
atcctgtttggagccttgttctgctgcctggaccccgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgcgagaaga
aaggagctctcgaagaactcaaaaagcgaccatctgactgtggtgaatgctttcactggc
tgggaagaggctcggagctgcggtttcaggaatgagaaggactattgctgggaatatttc
ctgtcctcaaataccatgcagatgctgcataacatgaaagggcagtttgctgagcatctc
cttgcagctggatttgtgaacagcagaaaccccaaggatcccaaatctaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatgga
tcagttaatatccatcccaaatcggtgaacgtggaggaaacagagttccattataactgg
ctcgtgtaccatttgaagatgaggaccagcagcatttacctgtacgattgcacggaggtg
tctccatactgcctcttgttcttcggaggggatatatccattcagaaggacaaggaccag
gacaccattgctgtggatgagtggattgttttccagtctccagaaaaaatagcaaacttg
gtcaagaaactgagacaagaacttgatgatcttctacaagaaaaaatagaaaacccccat
cccgtggactggcacgatattaaatgcagggacacagcagtgctgacagcaattatagac
ttaatcaccacgcaggagaacgaggccgtcaggaacttcgcgccgcgcttccagggcgag
cgctacagctga
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