KEGG   Hirundo rustica (Barn swallow): 120757209
Entry
120757209         CDS       T09369                                 
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03013  Nucleocytoplasmic transport
hrt03015  mRNA surveillance pathway
hrt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120757209 (NCBP2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    120757209 (NCBP2)
   03015 mRNA surveillance pathway
    120757209 (NCBP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrt03019]
    120757209 (NCBP2)
   03041 Spliceosome [BR:hrt03041]
    120757209 (NCBP2)
Messenger RNA biogenesis [BR:hrt03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     120757209 (NCBP2)
Spliceosome [BR:hrt03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    120757209 (NCBP2)
SSDB
Motif
Pfam: RRM_1 RRM_ACIN1 RRM_10
Other DBs
NCBI-GeneID: 120757209
NCBI-ProteinID: XP_039930326
LinkDB
Position
10:complement(13278421..13281989)
AA seq 172 aa
MSSSGTLSILRSDSYAELSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHEL
FGKSGDIKKVIMGLDKVKKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGF
KEGRQYGRGRSGGQVGCCTAWGFKGMVTLPDFLIFEKRMQNNFRNSRLRVIV
NT seq 519 nt   +upstreamnt  +downstreamnt
atgagctccagcgggacgctgagcatcctacgcagcgactcctacgccgaactcagccag
taccgggaccagcatttccgggggacgcggtacgaccaggaacggctcctgaggaagagc
tgcacgctgtacgtggggaacctctccttctacaccacggaggagcagatccacgagctc
ttcggcaaaagcggcgatattaagaaggtcatcatggggctggacaaagtgaagaaaacg
gcctgcggcttctgcttcgtggagtattatgccagaggagatgctgaaaatgcaatgcga
tacatcaacgggaccagacttgatgacaggatcataaggacagactgggatgcaggattt
aaggagggtaggcagtatggccgtggaagatcaggggggcaggtaggttgttgtacagcc
tggggttttaagggaatggtgactttgccagacttcttgatttttgaaaaacgaatgcag
aacaatttcagaaatagccgtttaagagtcattgtctaa

KEGG   Hirundo rustica (Barn swallow): 120762037
Entry
120762037         CDS       T09369                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03013  Nucleocytoplasmic transport
hrt03015  mRNA surveillance pathway
hrt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120762037
  09122 Translation
   03013 Nucleocytoplasmic transport
    120762037
   03015 mRNA surveillance pathway
    120762037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrt03019]
    120762037
   03041 Spliceosome [BR:hrt03041]
    120762037
Messenger RNA biogenesis [BR:hrt03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     120762037
Spliceosome [BR:hrt03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    120762037
SSDB
Motif
Pfam: RRM_1 RRM_ACIN1 RRM_10 RRM_occluded RRM_MUD2_C
Other DBs
NCBI-GeneID: 120762037
NCBI-ProteinID: XP_039939951
LinkDB
Position
21:complement(4426743..4429570)
AA seq 168 aa
MSGLLHTTLSGLNSDSYCEISQYRDQHFRGSRQLQEKSLKISSTLYVGNLSFYTTEEQIQ
ELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDA
GFKEGRQYGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKANHQPAIY
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtcggggctgctgcacaccacgctcagcgggctcaacagcgactcgtactgcgagatc
agccagtaccgggaccagcacttccggggtagcaggcagctgcaggagaaatccctgaag
atttcctccacgctgtatgtcggcaacctgtccttctacaccaccgaggagcagatccag
gagctcttctccaagtgcggagatgtcaagaggattgtcatgggtctggacaagatcaag
aaaaccccgtgtggtttttgctttgtcgagtactacacgagagcagatgccgagcacgcc
atgcggttcatcaacggcacgcggctggatgaccgcatcatccgcacggactgggacgca
ggcttcaaggaggggcgacagtacgggagaggaaagactggaggacaggtgcgagatgaa
taccggacggactacgatgtgggaagaggtggctttggcaagatcattcagatgcagaag
gcaaatcaccagcctgcaatctattaa

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