Hirundo rustica (Barn swallow): 120757367
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Entry
120757367 CDS
T09369
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120757367 (SOX2)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120757367 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120757367
NCBI-ProteinID:
XP_039930580
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All DBs
Position
10:complement(18396483..18484266)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggcacaggcaactccaactcggccgccaacaaccagaagaacagcccggaccgggtcaag
cgcccgatgaacgcgttcatggtgtggtcccgcgggcagcggcggaaaatggcccaggag
aacccgaagatgcacaactccgagatcagcaagcggctcggggcggagtggaaactttta
tccgaggcggaaaagagacccttcattgacgaagccaagcgtctcagagctctgcacatg
aaggagcacccggattataaataccgaccccggaggaaaaccaagaccctgatgaagaag
gataagtacacgttgccggggggcttactggcaccgggcaccaataccatgacgactggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttacgcgcac
atgaacggctggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacttacatgaacggatcgcctacc
tacagcatgtcctactcccagcaagggaccccgggcatggccctgggctccatgggctcg
gtggtcaagacggaatccagctccagtccccccgtagtcacttcctcgtctcattcaagg
gctccttgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacactccctctatcacatatgtaa
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