Hirundo rustica (Barn swallow): 120757582
Help
Entry
120757582 CDS
T09369
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04514
Cell adhesion molecules
hrt04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120757582 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120757582 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120757582 (CDH5)
04090 CD molecules [BR:
hrt04090
]
120757582 (CDH5)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Major cadherins
120757582 (CDH5)
CD molecules [BR:
hrt04090
]
Proteins
120757582 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
120757582
NCBI-ProteinID:
XP_039930951
LinkDB
All DBs
Position
11:19392841..19421823
Genome browser
AA seq
772 aa
AA seq
DB search
MSRLILLFSLFLAPVFADGESQKSTQNLCSNYVSHNRQKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFRVEETSGDVYAVERLDREKKAEYELTALIIDRTN
NRSLERPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHA
TVTYEVTTGGEYFTIDDSGVIYTKEPNLDRETKSMYEIVVQAKDAPGFSGDSSTATVIIT
LSDINDNSPVFKHPSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFD
IVANPYTNEGIIRPKKPLDFETVSEYKFGIEATDPTVNLRHFKSGNPRSISAVTIEVTDV
DEPPVFTKLSYEFKVRENHAEVKTLGSVHAEDPDAAKRKIRYIQRRASPNGDYVRVSNNG
VIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEP
RVCENAAPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLTENYDNTANITVRYGQFN
RELVKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FICIFTIIVIALLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGLKAEAAPSPYAQIQKPPGDIPAGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccttattctacttttctcgttgttcttggctccagtgtttgctgatggagaa
agtcagaaatcaacccaaaacctttgttcaaattatgtcagccacaaccgccagaagaga
gactggatctggaaccaaatgcacatcaaagaagagattgatacacctttgccacaccat
gttggcaagatcacatccagtgtgaggaacaacaacgccaagtacatcatcgagggtgaa
tacgccaacaccatcttcagggtggaggagaccagtggggacgtctacgccgtcgagagg
ctggacagggagaagaaggcagagtatgagctgacagccctcatcattgacagaacaaac
aacaggtccctggaacgcccctccaagttcatcatcaaggtgtatgacatcaacgacaat
gcccctgtgtttgtacagaaggtgttcaatgggtctgtcccagaaatgtcaccagtagga
acttcagtcaccaaagtgacagctgtggatgctgacgaccccacagtgtcaggtcatgcc
acggtgacctacgaagtcaccacaggaggtgaatatttcaccattgatgactctggtgtg
atttatacaaaagagcctaatttagacagagagaccaagtcaatgtatgagattgttgtt
caagccaaagacgctccaggtttttctggggattccagcacagccacagtgatcatcact
ttgtctgacatcaacgacaactccccagtgttcaaacacccatcatttcactttaaagtt
cctgaaaacatttcagtaggaggagaagttggcagagtcaaagtagaagatattgatgaa
ccacagcacagaaatacaagatacagctttatccaaggagagttcagggacacctttgac
attgtagcaaatccatacacaaatgaaggaatcattaggcctaagaagcccctggacttt
gaaacagtatcagaatacaagtttggcattgaggccacagaccccaccgtaaaccttcgg
catttcaaatccggcaacccccggagcatctcagcagtcaccatcgaagtcaccgacgtg
gatgagccccctgtcttcaccaaactctcatatgaatttaaagtgagggaaaatcatgca
gaagtaaaaacacttggttcagttcatgcagaggaccccgatgcagctaaacggaaaatc
agatatattcagcgtagagcaagtcctaatggagactatgtcagggtatccaataatgga
gttattcaacttcccaagccactggacagagaattcagctcctcatacaacatcactgtg
gcagctgtagagatcctggaagatggccgtctttccgacagagagtcacatgcccacgtt
catgtcatagttgatgatgtaaatgataatgctccagaacttgtttctcctgaggaaccc
cgagtgtgtgaaaatgctgctcctggaaaggtgattgtcaggatttcagctgttgacaag
gatgaaacatcacccagaggtttcttcagatactcactggccacagaggacagcaacttc
tccctgactgagaactacgacaacacggctaacatcactgtcagatacggacagttcaat
cgggaactggtcaaattccactacctgcctgtcctcatctcagacaacggcgaccctgac
ctcaccagcacaaacactctggtcatcagtgtctgcaagtgcaacgagaaaggcaacttc
actttctgtgaggagagggcaaagcaggttggcgtcagcatacaagcactggtggcaatt
tttatctgcatcttcacaatcattgtgattgcgttgctgattctgctgagaaagaggcac
aagaaggatctgagtgggctcgggaggaacgtggcagagatccacgagcagctggtcacc
tatgacgaggagggagggggtgagatggacaccaccagctacgatgtgtccgtgctcaac
tccgtccgcaagaatggcctcaaggcagaagctgccccctctccatatgcacagatccag
aaacctcctggggacatccccgctggagctggggggatggagatgatgattgaggtgaag
aaggatgaggctgacaacgacagagatttgctgccctacgacaccctgcacatctatggt
tacgaaggcgccgagtccatcgcagagtccctcagctctctgggctcaggctcctcagac
tctgacattgattatgactttctcaatgactggggacccaggttcaagatgttagctgag
ctgtatggatcagaaccaagtgaagattttgtgtattaa
DBGET
integrated database retrieval system