Hirundo rustica (Barn swallow): 120757595
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Entry
120757595 CDS
T09369
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120757595 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120757595 (FANCA)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
120757595 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
120757595
NCBI-ProteinID:
XP_039930970
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All DBs
Position
11:1041967..1073921
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AA seq
1426 aa
AA seq
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MAGAGGRSWRDLLAGRARKRKSPFGSEAELREAALRLLDRHQNLGDLLLEVGDSAEPGVQ
DGAEHQGLSPESFIVSVLQEQASKLGVPTATLAAKNAVANVERICQDSASPTRVPLLSSD
QRKRLSCLLQTVKDLLANNMFCRSLFCQEMWKMKEPPVLEAVWHLHSGDIAGLAELLERS
PAGPAAVEWLCSSLCGLCEQAGDVPCGDTELARRILSDFAIVFLQNGFEQASELGRKVEF
QKVAYICRAVLQRMLAWVLDAVGKEKQEDVSMVQAARFWLNVFNVSLYGSVAHPDSLRQF
FRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESICQLQQVL
ETHEVNWQHVLSCVSTLVVCQAEAEQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAAL
EGPAVFMPYSEWFKASFGSAGGQHGSSKKTLVFLFEFLSELVPFEAAPYLKVHIMYPPLV
PTKHRSLLLEYITLAKTRLADLKVAIEDMGLYEDLSATDEAVQPQAQALRDVEKALQIFE
NTRKIPTSVIEASIFRRPYYTSWFLPALLRPRVLPKAPDGRMAFIDSLKRADKIPSNLYS
TYLQACQAMKEKVLQDDSRAEPSHSKEPFEQLKAELAELRTLAVDQAPWEDVAAQTAVVS
DRLGRVLGDSSEENDAAPLDSPVQVAVPAPRLAPCHRSVVDLLLTSFCQTLLAASSFNPP
DRQGPCLSLLVKMMCGHRNLLPALLGRLCQLIFHQGPSLGAAHILGLAAFVIHLSECRAL
IPGVEAHFGDSQPAPGKALSVSEYWSSLLVCRTEESFAFCLRFCTAAAAYLMCKFSSCSR
EDFCALIPPGLIKKLQYLVPRLSLEARGVLCEETTSALSWSSLSCPSLNSRRASLCLWRQ
ARFQELLKEKAFQLSFREWLLMELEVCPEKDILSASERQDFHSWAIYQRYLPAPSAAGGC
DGDLEKACGVIINAFLDSSQRLDQGGCGRSKVSLSPEILCRLQELVLELRCRPKLPPGSS
AARRHFLLEILQGRLTGSQHGSALGQQLWRQQELLLHTRILVGLPASTLITTCWRGNKAV
LDCDSFFCFVNSELKNVCSRGYALPYDITAHFFRGLLNASLESEDAAGGLSQALATCQTE
CPLVLLSAALWWPRLEPILCSQWERLFGAPLAEELDRLRGWHGSSTRFLSSGAVFPVSDP
PWLSAAFLHGAILQQSPRGREALQRLGADAEQLLVALLFFSLLDLISARIAPKEGVDFQT
SLEWSLEILQCLEERGTSWPLLFHSAERDPGKFHVLRSATSDRHSRLLPLAFYSLTPCFQ
RELLRREPAFLGVALQMYIQLLQLFVEGEVLPQSDQDPTEHDPLELISAARRFLLGAVPH
CPAQSCGNIQPLLSTCEELDPELRAALQRFSQPAVDMELEEELELF
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgggcgggaggagctggcgggacctgctcgcagggagagccaggaagagg
aaaagccccttcgggagcgaagcggagctccgggaagcggctctgcggctgctggatcgc
caccagaacctgggtgacctcctcctggaggtgggagattcagccgagccaggtgtgcag
gatggggcagagcaccagggactgtcaccagagtcatttatagtctctgtcctgcaggaa
caggcctcaaaactgggtgtgcccacagcgaccctggcagccaaaaatgccgttgccaac
gtggagcggatctgccaggattctgccagccccacaagagtcccactgctgagctctgac
cagagaaagaggttgtcctgcttgcttcagactgtgaaggatttgctggcaaacaacatg
ttctgtcgctccctcttctgccaggaaatgtggaaaatgaaggagcccccggtgctggaa
gccgtgtggcacctgcacagcggtgacatcgcgggcctggcagagctgctggagaggagc
ccagcaggcccagcagcagtggagtggctctgcagcagcctctgtggcctctgtgagcag
gctggggacgtcccctgtggggacacggagctggcacggcgaattctctcagactttgcc
atcgtgtttcttcagaatggctttgagcaggcttcggagctgggaaggaaggtggaattc
cagaaggttgcctacatctgccgtgctgtcttacagagaatgctggcatgggtgcttgat
gccgttggtaaagagaagcaggaagacgtttccatggtgcaagctgcgaggttctggctg
aatgtgttcaacgtgtccctttatggaagcgtggctcaccccgattccttgaggcagttt
ttcagacacaccctgaccgaggttctcacctacaaccccgtgctgaaagtgtctgatgcc
atccagatgcagaaggagtggagctttaccaggacttctcccctgctcacggctctgtat
cgcaagctgttggtggcattcagtgtgaaggaatccatctgccagctgcagcaggtcctg
gagacccacgaggtgaactggcagcacgtcctgtcctgtgtgtccacgctggtggtgtgc
caggctgaggccgagcagctcttcaaggatctactgagccatctcctgctaaaggccttt
gggaattatgacatggaaaatatgatcactgcattcctgatcgctcgtcaggccgctctg
gagggccctgctgtcttcatgccttactctgagtggtttaaggcttcctttgggagtgct
ggtggccagcacgggagcagtaagaaaactctggtcttcctcttcgagttcctgtcggag
ctggtgccctttgaagctgcgccgtacctgaaggtgcacatcatgtacccgcctcttgtg
cccacgaaacaccggtccctgctcctggagtacatcactctggctaaaaccagactggcc
gacctcaaggtggccatagaagacatggggctctatgaagacctctctgccactgatgag
gctgtgcagccccaggcccaggcactccgtgatgttgaaaaagcccttcagatattcgaa
aacacgaggaagatcccaacctctgtgatagaggccagcattttcagaaggccatattac
acttcctggttccttcccgctttgctcaggccccgtgtgctccctaaagccccggatgga
cgcatggcttttatagactccttaaagagagctgataaaataccttcaaacttgtactcc
acatacctgcaagcctgtcaggctatgaaagagaaggtgttacaagatgactccagagca
gagcccagccattccaaggagccttttgagcagctgaaggctgaactggctgagctcagg
acgctggcagtggaccaggctccgtgggaagacgtggcagctcagaccgccgtggtttcg
gacagactcggccgtgtgctgggtgacagcagtgaggagaatgacgctgctcctttggat
tccccagtccaagtggccgtccctgcccccaggctggccccgtgccaccggagcgtagtt
gatcttctgctgacatcattctgccaaaccctacttgctgcttcctcttttaaccctccc
gacaggcagggcccgtgcctctccttgctggtgaagatgatgtgtggacacaggaatctc
ttgcctgcgctcctgggcaggctctgccagctcatctttcatcagggtccttccctcggt
gccgctcacattttgggactggcagcttttgtgatccacttaagtgagtgcagagcttta
attcccggagtggaagcccattttggggattctcagcctgctcctggaaaggccctttct
gtttctgagtactggagctccttgctggtgtgcagaacagaggagtcctttgccttctgc
ttgaggttttgcactgcagcagcagcttacctgatgtgcaagttttcttcctgttctcgt
gaagatttttgtgccttgattcctcctggcctgattaaaaagctccagtacctcgtgcca
aggctcagcttggaagctcggggagtcctgtgtgaggagaccacatctgccctgagctgg
agttccctgtcctgcccctctctgaactccaggagagccagcctgtgcctatggaggcaa
gcacgcttccaagagctcctgaaggaaaaggcattccagctatctttcagagagtggctg
ctgatggagctggaagtgtgccctgaaaaggacattctctctgcttcggagagacaggat
ttccattcctgggccatctatcagaggtaccttcctgccccttctgctgctggtggctgt
gatggggacctggagaaggcgtgtggggtcatcatcaacgccttcctggactcctcacag
aggctggaccagggtggctgtggccggtcgaaggtgtcgctcagccccgagattctctgc
aggctgcaggagctggtgctggagctgaggtgcaggccaaagctgcctcccggctcctca
gctgcccggagacacttcctgcttgagattctccagggaaggctgacaggcagccagcac
ggatctgctctgggacagcagctgtggaggcagcaggagctgctgctgcacaccaggatc
ctggtcgggctccctgcgtccaccctgatcaccacgtgctggagagggaacaaagcagtg
ttggactgtgacagcttcttctgttttgtgaactctgagctgaagaacgtctgctccaga
gggtacgcgctcccctacgacatcacagctcacttcttcaggggcctgctgaacgccagc
ctggagagtgaggacgcggcaggagggctcagccaggccctggccacctgtcaaaccgag
tgtcccctggtgctcctctctgcagcgctttggtggccaaggctggagccaatcctttgc
tcccagtgggagagactctttggggctccacttgcagaagaactggacagactgaggggc
tggcatggctcgagcaccaggttcctttcttcaggggcagttttccccgtctctgaccct
ccttggctctcagctgccttcctccatggtgccatcctgcagcaatccccacgaggacga
gaggcgctgcagaggctgggggccgacgcagagcagctccttgttgctctgctgttcttc
tctctcctggatctcatctcagccagaatagcaccaaaggaaggagtggatttccagacg
tctctggaatggtccctggagatcctgcagtgcctggaagagaggggcacatcctggcca
cttctcttccattcggcagagagagaccccgggaagttccacgtcctgcgcagcgcgacc
tcggaccggcacagccggctcctgcccctggcgttctacagcctcaccccctgcttccag
cgggagctgctccggcgggagccggccttcctcggcgtggcactgcagatgtacatccag
ctgctgcagctctttgtggaaggggaagtcctgccacagtctgatcaagaccccacagag
cacgatcccttggagctgatctctgcagcccggcgcttcctgctgggagccgtcccgcac
tgccctgcccagagctgcgggaacatacagccgctcctgagcacctgtgaagaactggac
ccggagctgagagccgcccttcagcgcttctcacagcctgccgtggacatggagctggag
gaagagctggaactcttctga
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