Hirundo rustica (Barn swallow): 120757624
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Entry
120757624 CDS
T09369
Symbol
CDH11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120757624 (CDH11)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Major cadherins
120757624 (CDH11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
120757624
NCBI-ProteinID:
XP_039931032
LinkDB
All DBs
Position
11:complement(18622083..18712071)
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AA seq
792 aa
AA seq
DB search
MKEDHCLHAALLCLGVLCYSQALTAERLNHSRPLLHGHHEKGKEGQVLHRSKRGWVWNQF
FVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREE
RAQYTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQ
VTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD
MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN
GLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKTLDYETKKSYSLKVEAANVHIDPKFIS
NGPFKDTVTVKIAVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRYS
IDRHTDLERYFVINAEDGNIKTIKALDREEMAWHNISVFAVEVHKQHQEAKVPVAIKVVD
VNDNAPKFAAAYEAFVCENARSNQQFITISADDKDDSANGPRFIFSLPPEIIHNPNFTLR
DNRDNTASVLVRREGFSRQKQDLYLLPIVISDGGMPPLSSTNTLTIRVCGCDSSGSLLSC
NAEAYVLNAGLSTGALIAILACIVILLVIVVLFVTLKRQKKEPLIVFEEEDVRENIITYD
DEGGGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYLPRPGLRPTPNSVDVDDFINTR
IQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFKKLAD
LYGSKDTFDDDS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaccattgtttacacgccgctctcctctgcctgggggtcctgtgctacagc
caggccctgactgcagagaggctcaaccactcccggcccttgctgcacgggcaccacgag
aagggcaaggagggacaagtcctgcaccgttccaaaagaggctgggtgtggaaccagttc
tttgttatagaggagtacacgggaccagatcctgtgctggtaggaaggcttcattcagat
attgattctggagatggaaatattaaatacattctctcaggtgaaggagcaggaattatt
tttgttattgatgacaaatcagggaacatccatgcaaccaagacactggaccgggaggag
agagctcagtacaccctgacagctcaggctgtggacaggaacacaaacagacctttggaa
cccccttctgaattcattgtcaaagttcaagacataaatgacaacccacctgagtttctc
catgaaaactaccatgccaatgtgcccgagagatcaaatgtaggtacatcagttattcag
gtaacagcttcagatgctgatgaccctacctatgggaacagtgccaaattggtttacagt
atccttgaaggtcagccctacttctcagtggaggctcaaacaggaatcatccgaactgcc
cttcccaacatggacagagaagccaaggaggagtaccacgtggtgatacaggccaaggac
atgggaggacacatgggaggcctctcagggacaaccaaagtgacaattacgcttacagat
gtcaatgacaacccaccaaagttcccacagagtgtgtaccagatgtcggtgtcggaagcg
gctgtcccaggagaggaagtggggagagtgaaggccaaagatcctgacattggggagaat
ggcttggtggcttacagcatcattgatggagatggcatggacatgtttgaaatcaccaca
gattatgagactcaggaaggggttgtgaagcttaagaagaccttagattatgaaaccaaa
aagtcctacagcctgaaggtggaggcagccaatgtccacattgaccccaagttcattagc
aacgggcccttcaaggacacagtgacagtgaaaatagcggtggaagatgctgatgagcca
ccggtgtttttgaagccaagttacatttttgaagtacaggaaaatgcagcatctggtact
gtggttggaaaagtacatgctaaagacccggatgctgccaacagcgctataagatattca
attgatcgacacactgatcttgaaagatattttgttattaatgcagaagatggcaatatc
aagacaataaaggctttggatagggaagaaatggcttggcataacatctctgtctttgca
gttgaagtccacaaacagcaccaggaagccaaagttcccgttgcaatcaaggttgttgac
gtcaatgacaacgctcccaagtttgcggcagcctacgaagcctttgtgtgtgagaatgcc
cgaagcaaccagcaatttattacaattagtgctgatgacaaggacgactcggccaatgga
ccaagatttatcttcagtttaccacctgaaattattcataatccaaattttacactcaga
gacaacagagataacacagcgagtgtgctggtcagacgggaagggttcagtcgccagaag
caggatttgtacctccttcccattgtgatcagcgacggcggcatgcccccgcttagcagc
accaacacgctgaccatccgcgtctgcggctgcgacagcagcggctccctgctgtcctgc
aatgccgaggcctacgtcctcaatgcagggctcagcacaggcgctctcatcgccatcctg
gcctgcatcgtcattctgttagttattgtggtgctgtttgtaaccctgaagaggcagaag
aaagagcccctgatcgtgtttgaggaagaagacgtgagggaaaacatcatcacatacgat
gatgagggtggaggcgaggaagatacagaggcatttgacatcgccacactgcagaacccc
gatggcatcaatggctttatcccccgcaaggacatcaagcccgagtaccagtacctgccc
aggccggggctgcggcccacacccaacagtgtggatgtagatgatttcatcaacaccagg
atacaggaggctgacaatgaccccactgcccctccctatgactccatccagatctatggc
tacgagggcaggggctccgtggctgggtccctcagctccttggagtcagcgacaacagat
tctgacttggactacgactatctacaaaactggggacctcgatttaagaaacttgcagac
ttgtatggctccaaagacactttcgatgatgattcttaa
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integrated database retrieval system
