Hirundo rustica (Barn swallow): 120757649
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Entry
120757649 CDS
T09369
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120757649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120757649
03036 Chromosome and associated proteins [BR:
hrt03036
]
120757649
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120757649
Coactivators
SAGA/TFTC/STAGA complex
120757649
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120757649
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120757649
NCBI-ProteinID:
XP_039931088
LinkDB
All DBs
Position
11:complement(20740492..20890552)
Genome browser
AA seq
1004 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEAPPPRTSAPSQQPQQGS
LAGGSSPGRQQHGRPAPPPAPGAGEAAERPGSAGGRAPAQGPLPSPSPPAAAAAAAGRGA
SVNSSSVQQSHGAAPGGGSPAAPAPPQPAAPAQPVNNHAAASTAAARDAGSPEPGPSPPA
ADGAPGAAGGGGTPAGGGGAAGAAEGAAAAPAPRPGEAAPSGEGAGSRAVAVPPVSGHGG
AAAAQPQPAPGALPAVTALGASASPAPAPPAPGSAPPAPAAPAAPKPAVTAKAGAVLPAA
PQAVSPRPALGAAPRIVAPQLIVRPPPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQA
LAQAQMQAQVQTQGQGPASMSPRLSVPTTGPVFRLSTAQQPTSVATSSVRLGLPVQAKVV
PTTSSAAATLPGGAVLSHTTVSVATTSAQNLYKTTVATGSSASQQPAVLSGGQSQGSGQP
QGQPRLPLPPPTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNS
PSPETSRNVKALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNS
QHLVLQGQPSQQSLQQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPP
QVKVVQSNQSSQLQIIQSTSAQTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQAS
KSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGT
QIQSCKDEPFLAAVPLHKRILETAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQ
HRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQA
RLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRRLDAPGLLTIGGEGAGACGGSQAG
LGTASPRQYPRQKITRVNLRDFIFYMEQEREMSHSLLLYRALLK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggatccgctagaggagatgctgctcttctccgaggaggtggac
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggccggcggacgcggc
cccgccgaggcgcccccgcccaggacctccgccccgtcccagcagccgcagcaggggagc
ctggcggggggcagcagtcccggccggcagcagcacggccgccccgcgccccctcccgcg
cccggggcaggggaggcggcggagcgccccggcagcgcggggggccgagcccccgcccag
gggcctctcccgtctccgtctcccccggcggcggcggcggcggcggctgggaggggagcg
agtgtaaacagtagtagtgtgcagcaatcacatggagcggctcccggcggcggcagcccc
gccgctcccgccccgccgcagcccgccgcccctgcccagcctgtcaacaaccacgcggcc
gcttcaaccgccgccgcgcgggacgcggggagccccgagcccggccccagcccgcccgcc
gccgacggcgcgcccggggccgcggggggcggcgggaccccggcggggggcggaggagcg
gccggagcggccgagggcgccgccgctgcccccgcgccgcgccccggcgaggcggcgccc
agcggggagggcgcggggtcccgggcggtcgcggtgccgcccgtcagcgggcacggcggg
gccgccgccgcgcagccccagcccgcgcccggcgcgctgcccgcggtcaccgctctcggc
gcctccgccagccccgcgcccgcgccgccggccccgggctcggccccgccggcccccgcg
gcccccgccgcgcccaagcccgcggtcaccgctaaggctggcgctgtcctgcccgccgcc
ccccaggccgtgtcgccgcggccggcgctgggcgctgccccccggatcgtggctccgcag
ctgatcgtgcggccgccgccgcagaccaccatccagctgccccccggcttcaccatcccg
cccgggatggtcctggtgcgcacggacgctggacagctggtgatggtgccccagcaggct
ctggcacaggctcagatgcaggcccaggtgcagacacagggacagggtcctgccagcatg
tcacccaggctttctgtgcccacaactggtcccgtttttcgcctgtcaacagctcagcag
ccgacgtcggtggccacgtccagcgtccgcctggggctcccggtgcaagccaaggtggtg
ccgaccacgagcagcgcggcggccacgctgccaggaggggctgtgctctcccacaccacg
gtctcagtagctacgacgagcgctcagaatttgtacaagacaacggtagccactggaagt
tcagcttctcagcagcctgcggtgctgagtggagggcagagccagggctcagggcagccc
caagggcagcctcggctgccgctgccccctcccacggcagcgcaggtgccagcgcagccc
ctggtcatccccagctcccctgtgccgggaactaccgtggtgtcgcaggaaatgcaagag
aatgtgaaaaaatgtaaaaactttttagctacccttataaaacttgcttctcataattca
ccatctccagaaacgtcccgcaatgtgaaagctctggttcaagatttgttggatgcaaag
attgatccagaagagtttacaggccgccttcaaacagaactcaaatcatctcctcagcca
tatcttgtacctttccttaagaaaagtctacctgcactgagacaatctttactgaatagt
cagcatttggttttgcaaggacagccgtctcagcagtcgctccaacagaccaagctctca
caagtgatacctcaatctgcctcgggaagcatttcctccgttgtcacgacgcagacgata
ggaataaggcagccaaacaacatttgcacagtctctgtatcaaatacagtgcagcctcct
caggttaaggtggtacagtcaaatcaaagttctcaactgcagattatccagtcaacatct
gctcaaactgtgaaacgaacccctgcttgccagactacccagattaggatgccagtggta
ataactcagaccattagaccacaaggcacagtagggaaggcaccaacaatacaagccagt
aaaagtcctgggggctttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgac
cctggaggtggttctttcagagatgatgatgacatcaatgatgttgcctctatggctggc
gttaaccttaatgaagaaagtgcccgaattatggctaccaactctgacttggttggaacc
cagatccagtcctgtaaagatgaacccttccttgctgctgtacctctccataaacgcata
cttgaaacggctaaaaaactaggaattactgatgtgccagctgaggtcgttacttttatt
tcccatgcaacacagaacagattaagaacggtgatagagaaagtgacggtgataacccag
caccggatggagtcgtacaaagacgatgaatggtacgaacaagccaccgatgtccgatca
cagctgaagttcttcgaacagctggagcgtttagaaaagcaaaggaaagatgaacaagag
cgggaaattttgctgaaggctgccaagagtcgctcaaggcaagaagacccagagcaagct
agactgaaacaaaaagcaaaggagatgcagcagcaggagcttgcccagatgaggcagagg
gatgccaacctaacggcgctggcagccatcggtccccgcaagaaacggaggctggatgca
cctggcctgctcaccataggaggagagggcgcgggggcgtgcgggggcagccaggccggg
ctgggcacggcgtccccgcggcagtacccgcggcagaaaatcacacgggtgaacctcagg
gacttcatcttctacatggaacaggagcgagaaatgagccattccctcctgctctaccga
gctctgcttaaataa
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