Hirundo rustica (Barn swallow): 120757736
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Entry
120757736 CDS
T09369
Symbol
CDH15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120757736 (CDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120757736 (CDH15)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Major cadherins
120757736 (CDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_FAT4_N
Big_9
Motif
Other DBs
NCBI-GeneID:
120757736
NCBI-ProteinID:
XP_039931234
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All DBs
Position
11:complement(1291520..1297453)
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AA seq
778 aa
AA seq
DB search
MGPPLLLACLLAPLCARGAGPAQPGAAAPQAWRQHEAPRRVKRAWVIPPISVSENHKRIP
HLLVQIKSDKQQPGGVIYSIKGPGVDEEPLGIFSIDKFSGKVFLNAMLDREDNDRYRLRA
FALDLGGATLEDPTDLEIIVVDQNDNRPLFGRDVFTGSVVEGAEPGTCVMTVEATDADDP
DTDNAALRYSILEQGAAGMFSINATTGEICTARPGLDRETMGVYNLTVQAADMSGDGLTT
TAMAVIYLEDINDNAPEFTKEEFSMEVEEQAAGVDVGRVFVHDKDLAGSPSWLAKFTVLE
GDPEGAFAIRTDPHTNDGVLSVVKPLDHEVRDRFELTVSVQNERPLEPSAPASPRALATV
RVRVRDVNEAPVFRENPRRISVLEGTPPGTPITTYTASDPDTHQIQTLTYALLYDPADWL
RLDPHAGTVRTKRELLHPSAFLQGGWYIALVLARDDAEPPLSATGTLSIEILEVNDHAPQ
LQPPAGVLCGRPGRGGTLLLGATDDDRPPHGAPFHFQLSPQHPQLARNWSLARFNVTHAV
LAVLAELPEGLYSLPLLLRDSGTPPREQQQLLNVSVCHCGRDGACLDGALAAATAGAGIT
LGALTIILGSTILLLVLAGLGAARVRGRRRALRKGLLQRSRDDMRDNILNYDEQGGGEED
QDAYDINQLRHPDLFSPRAKPPQRRDAPLSSGTPLAPRKLPSSPSDIEDFINEGLEAADS
DPSVPPYDTALIYDYEGSGSVASPLSSIVSSLTDEDQDYDYLSEWGPRFRRLADLYGH
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggccccccgctcctcctcgcctgcctgctcgccccgctctgtgctcggggtgccggc
ccggcccagccaggcgccgcagccccccaggcctggcggcagcacgaggctcctcggcgg
gtgaagagggcctgggtgatcccccccatcagcgtctcggagaaccacaagcgcatcccc
cacctcctggtgcagatcaagtcggacaagcagcagcccggaggggtgatctacagcatc
aaagggccgggcgtggatgaggagcccctgggcattttctccatcgacaagttcagcggg
aaggttttcctcaacgccatgctggaccgcgaggacaacgaccgctaccggctgagagcc
ttcgcgctggacctgggcggtgccaccctggaggaccccacggacctggagatcatcgtg
gtggaccagaacgacaaccggccgctcttcgggcgggacgtcttcaccgggagcgtggtg
gagggcgccgagccagggacctgcgtgatgaccgtggaggccaccgacgccgacgacccc
gacacggacaacgcggcgctgcgctattccatcctggagcagggtgcggccggaatgttc
agcatcaacgccaccaccggcgagatctgcaccgcacggcccggcctggaccgggagacc
atgggcgtgtacaacctgacggtgcaggcggccgacatgtccggggacgggctgaccacc
acggccatggccgtcatctacctggaggacatcaacgacaacgctcccgagttcaccaag
gaggagttctctatggaggtggaggagcaggcggccggcgtggacgtgggcagggttttt
gtgcacgacaaggacctggcgggctcgcccagctggttggccaaattcaccgtcctggag
ggcgaccccgagggcgccttcgccatccggaccgacccgcacaccaacgacggcgtgctc
tccgtggtcaagccgctggaccacgaggtgcgggaccgcttcgagctgacggtgtcggtg
cagaacgagcggccgctggagccctcggcccccgccagcccccgggctctggccacggtg
cgggtgcgggtgcgggacgtcaacgaggcgcccgtgttccgagagaacccgcggcggatc
agcgtcctggaggggacacccccgggcacccccatcaccacctacaccgccagcgacccc
gacacgcaccagatccagaccctcacctacgcgctgctctacgaccccgcggactggctg
cgcctggaccctcacgccggcaccgtccgcaccaagcgggagctgctgcacccgtccgcc
ttcctgcagggcggctggtacatcgccctggtgctcgcccgcgacgatgccgaacccccg
ctctcggccaccggcacgctgtccatcgagatcctggaggtgaacgaccacgctccgcag
ctgcagccgccggccggggtgctctgcgggcggccgggacgcggcgggaccctgctcctg
ggggccaccgacgacgatcgacccccccacggagcccccttccacttccagctcagcccc
cagcacccccagctcgcccgcaactggagcctggcccgcttcaatgtgacccacgccgtg
ctggccgtgctggcggagctgcccgaggggctctactcgctcccgctgctgctccgggac
tcggggacccccccgcgggagcagcagcagctgctgaacgtctcggtgtgtcactgcggc
cgggacggcgcctgcctggacggggccctggccgcggccaccgccggggccggcatcacc
ctcggggcgctcacgatcatcctgggcagcaccatcctcctcctcgtgctggccgggctg
ggcgctgcgcgggtgcgcgggcgccgccgggctctgcgcaaggggctcctgcagcgctct
cgggacgacatgcgcgacaacatcctcaactacgacgagcagggcgggggcgaggaggac
caggacgcctacgacatcaaccagctccggcaccccgatctcttctcgccccgggccaag
cccccccagcgcagggacgccccgctcagctccgggacccccctggccccccgcaagctg
cccagcagcccctccgacatcgaggacttcatcaatgaggggctggaggcggctgacagc
gaccccagcgtgcccccctacgacaccgccctcatctacgactacgagggctcgggctcg
gtggccagccccctcagctccatcgtgtccagcctgacggacgaggaccaggactacgac
tacctgagcgagtgggggccccgcttccgccgcctggcagatctgtacgggcactaa
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