Hirundo rustica (Barn swallow): 120757857
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Entry
120757857 CDS
T09369
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120757857 (IRX5)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120757857 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120757857
NCBI-ProteinID:
XP_039931449
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Position
11:complement(10067546..10071070)
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AA seq
472 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTAADPKAAPGCERLQESPGPREA
ESGLSDSDCKELAEERLDGPPVPHKAPGASPLGPCPAGRGPPPAGGEEPPPYRPPSAAAG
PPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPAV
LGGGGPSRSPPRPRSPAAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGPA
AAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggttccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggaccccgcttaccgcaagaacgcg
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcggcggcggctcaagaaggagaacaaaatgacctggacc
ccacgaaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccgggacgccggacacagcggcg
gatcccaaggcagcgccgggttgcgagcgcctccaggagtcccccggcccccgggaggcc
gagagcggcctgagcgactcggattgcaaagaactagcggaggagcggctcgacgggccg
cccgtcccccacaaggcgcccggcgcttccccgctgggaccgtgcccggcgggccgcggg
ccgccgccggcgggcggcgaggagcccccgccgtaccgcccgccctccgccgccgccggg
ccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtcatc
cactcgccgcagcaggcggccctcgccaagcccaagctctggtcgctggccgagatcgcc
acctcggcggacaaggctaaggaggccggcggcgaggcggcgccccccggccccgccgtg
ctgggcggcggcggcccgtcccgatccccgccgcggccgcgctcgccggccgcgcagtgc
cccttccccaacggggcggtcctgccccgaccgctctactacacggcgcccttctacccc
ggctacacgaactacggctccttcggggccctgcacgggcaccccgccggcggccctgcc
gccgcagcccccggcgcccacttcaatggattaaatcagactgttctcagcagagccgag
agcctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaagac
tcaccttacgaactgaagaaaggtatgtccaacatttaa
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