Hirundo rustica (Barn swallow): 120757905
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Entry
120757905 CDS
T09369
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120757905 (RFWD3)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120757905 (RFWD3)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120757905 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_WDR5
WDR55
zf-rbx1
zf-RING_5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
EIF3I
Myo5a
Rtf2
zf-RING_11
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_4
zf-UDP
Beta-prop_WDR3_2nd
zf-RING_Vps41
Nairovirus_Gn
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
CFAP43_N
NBCH_WD40
WD40_2
DUF7837
Beta-prop_RSE1_2nd
zf-Nse
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120757905
NCBI-ProteinID:
XP_039931560
LinkDB
All DBs
Position
11:complement(7863539..7886439)
Genome browser
AA seq
753 aa
AA seq
DB search
MAQEEMEVDLQPGIGYSMETLQTPALEPSGHTALSSHIPVLGEGEGSAAALPAADAVVTP
NVGTRREAAAEPHLQMGPATAPSGLQRLQGAFDLYQALPVPQLTQRPQRRERARRQQRIG
GSQRTISARAALDHYFQLSRTQEPSAGPVPHQEFPHIVRDTQEQHPDETIEVIDSDSTTS
EEEEEEAVEAAEPLLPSAQEMPPAASSRVSSQVQAEPPQALSQASADHEGDEDKAEVQQK
HTSPLKKLEPSVPIAPQDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKG
QAGKCPQCNKKAKRSDIVILYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQ
LQVLTDECSKLRKQVQELKALVAQYNASTSQQPGSSRPCLPGSLPSNQSQRKYHLEKAFL
VSQTGNCRVMAYCDSLSCLVVSQPSPQSTFIPGCGVKMMSLSNLKSNQYIPIHSKQIRGL
AFGTRADGLLLSAALDNTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNGS
IMIYDLRDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAG
NSYRPHHLPLEPGGCIDLQTEINTRHCLATYRPGKNNPCVRCVMMELTCSPLTEGSEDVV
CSSNPVQTFSAGPACKLLTKNAIFQSPEDDGSVFVCAGDEASNSALLWDAGSGSLLQKLP
ADLPVLDICPLEVNQSHLLATLTEKMVNIYRWQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagttgatctccagccagggattggttactcaatggagacc
ctccagacacctgccctggagccctctggtcacacagcgctctcatcccacattcctgtg
ctcggggaaggagaaggcagcgctgcagcccttcctgctgctgatgctgttgtcacaccc
aacgttggcacaagaagggaagcagctgcagagcctcacctgcagatgggtccagccaca
gcccccagtgggctgcagaggctacaaggggcgtttgatctgtaccaagcactgcccgtg
ccacagctcacacagcgtccacaaagaagagagagagctcgcaggcagcagagaattggt
ggttcccagaggacaatcagtgccagggcagcattggaccattactttcaactcagtagg
acccaagagccatctgcaggaccagttccacaccaagagttcccccacattgtgagggac
acccaggaacagcacccagatgagacaatagaagtgattgactctgacagcaccacttct
gaggaggaggaggaggaagcagtggaggcagcagaaccactgttaccatcagcccaggag
atgcctccagcagcgagctcaagagtttccagtcaggtccaagcagagccacctcaagct
ttgtctcaagcttctgcagatcatgaaggtgatgaagataaagctgaagtccagcaaaag
catacaagtccactaaagaaactggagccatcagttcctattgcacctcaggatgaggag
gaaggagatacctgtgcaatctgctttgagcagtggaccaatgctggggaccaccgcctg
tctgcgctgcgctgtggacacctctttggctacacgtgcatcgagaggtggctcaaggga
caggcagggaagtgccctcagtgcaataagaaggccaagcgttccgacatcgtgatcctg
tatgcccgcacgttgaaagcgctggataccagcgagcaggagcgcatgagaagctcttta
gaaaaggagcaaatgttgcggagacaggcagagctggaatctgcacagagccgtctccag
ctccaggttctgacagatgaatgcagcaaactccgcaagcaagttcaggagctgaaggct
ctggtggcccagtacaacgcgagcacctcccagcaacctggcagctcccgcccctgcctc
ccaggcagcctcccctccaaccaaagccagcgcaagtaccacttggaaaaggcttttttg
gtgtctcagactgggaactgcagagtgatggcatactgtgactcactgagttgtcttgtg
gtatcacagccttctccgcagtctacttttattccgggttgtggtgttaagatgatgagc
ttgtccaacctgaagagcaatcagtacatccccatccacagcaaacagattcggggcctg
gcttttggcactcgagcagatggtttgctgctctctgctgctctggacaacactctgaaa
ctcaccagcttggcaacaaacactgtggtgcagacatacaatgctggccgtcctgtgtgg
agctgctgctggtgtcttgatgatacaaactatgtctatgctggattggtcaatggctct
atcatgatatatgatctgagagacacaaactctcatgtccaagaactggtccctcagaag
tcaaggtgccccatggtatcgctgtcctacctgccccggatggcctcagcatcgctgcct
tatggtggaatattggctgggaccttggaaggagcctgcttttgggaacagaaagctggc
aactcctaccggcctcatcacctgcccctggaacccggaggctgcatcgacctccaaaca
gagatcaacacgcggcactgcctggccacgtacaggcctggtaaaaataacccatgtgtg
cgttgtgtgatgatggaactgacttgcagtccactgacagagggctccgaagatgtggtg
tgttcttctaacccggttcagactttcagtgctgggcctgcttgcaagctgctgaccaaa
aatgccatttttcagagcccagaggatgatgggagtgtctttgtgtgtgctggtgatgag
gcatccaattctgctctgctctgggatgctggaagtggttccttgctgcagaagctgcca
gctgacctgcctgtgctggatatctgccccttggaagtgaaccaaagccacctcttggct
actctgacagagaagatggtgaatatctacaggtggcagtga
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