Hirundo rustica (Barn swallow): 120757916
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Entry
120757916 CDS
T09369
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120757916
04091 Lectins [BR:
hrt04091
]
120757916
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120757916
Lectins [BR:
hrt04091
]
C-Type lectins
Others
120757916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
PKD
AGA2
UL45
HolB_lid
Motif
Other DBs
NCBI-GeneID:
120757916
NCBI-ProteinID:
XP_058278121
LinkDB
All DBs
Position
11:4705164..4740949
Genome browser
AA seq
2496 aa
AA seq
DB search
MTPQAFEEGSKKSGALESKTSVTHSTELRMWLGVTVLISLAVCLAVEEAADEGIPCAKYQ
QAFNHSCYEFVRLQQTFTGAQSWCERGGGHLVFIQNEDTQEFLQKHIAEDQEWWIGLISN
SLLNETTDGSITWLDTSNISYSNWYKDQPSSSSSTCGYILKNAKYQWGVTENCSQEFDFI
CEFESGQSIACDNYNATVQCGSGEVIQIEESFYGRKTRHYCVSETPLQLETDEGCSWISV
KDEVAGQCHGLQACQVAADGTFFGDPCPALGSYLSIQYHCKEGLHLVMTDTCFVLENITV
TLNWLLSPYSGNLSCTISTGDGHTIDPYYPLSLVSNLTYSYSSPGEFTVFVECSTSEWHV
MAQRQVTVQDQVDQLSVTGCYSQHETGNGSQCRTLYGDVLWIQVQLSGGNGVTYSILADN
MTLTESSAKEGLVPHNLTLNSASQELLGPGIHQLEIRASRDTASEISGSIAVHLIEPVSG
IQAAVASHTLQLGEDLEVNVSVFHGAPEKLMFEVIGSNQTHCHKAEGPRGEPRTYSVPMP
LEGTFLVKVVAMNAFSNMSLDLGFITVLANSSHKKDSAKEEDSYKTNTQKKNDHKIYIKP
SRHVDPFTTVTLGWPENNKNSSFLWTCGACWPAWNECVKQQIILTNQSEVQIPSSCLPPP
KSAVTVRITVQSHGSEVRQDEQCLYVTAKQELQLEIRCEANCKPVNVSDEVVLSVSGQED
SQAIYYNWYLDNTFQNKPTTLPLACGLTGFQQNSLNLLQSNTSVLRMTSSFLQTQGEAFQ
IKVTGTTQRGYGEGWFLLSTVPPPEAPGCAVSPEHGSVLTAFRLSCGAPGSEGSGRSSPS
RQLTYCFYVTPDSLLDCSPDPELFPVYLPLGEEENNFILHVTIIVSNNFGDTVRTNVSVK
VGLADMMDGNLTLQAVISEKANTILKDGNNSMSLFQLYKSVTSVLNQQNQEESFNMSLQT
NTRKELRGLMLTTLSVVNITSMQTALKMSEVLKEITYRSEELSVSAQVEASNTLKHVSAS
LLAVNMEHSRDDQELKEAANYLFNAVSNVLKASVEIRAANTSMPEAEQSSVSDQLLSTVE
NLQSALLFGKAPGDEPTVVTSPSATMYMHRLQTENMDSTFITISNSSSASFTLPPASSLN
VSGVDGETVDIRMVSFAMNPFFSSDGSFDISGTVGGLSLTGLDGLIIPVSNLKENIEIML
PRLSATQEDKILLNLGNYSTFQVNVTSENTSIVIHLESEHDIPLILYLGYGYHPNETNYD
MKNHLFYKKTSGGETNSWVLSPEELIFGEGTYYFMVLQDMGMDSTVYSGLIINATCFASR
CVFWDEHQGGWNSYGCHVGPKTNPSSTQCLCNHLTFFASSFLVIPNAIDVSKTAQMFGTF
VDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFARYRYLVTVFTGHR
RGAATTSKVTLTLYGLDGESEPHHLNDPDTPVFERGGVDVFLLCTFFPLGELQSIRLWHD
NSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAIDIGECVLDKVFPVATEQDMKQFSNLF
FMRTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQK
MDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNVRPRPAQQSREKKPGRNGQVSPGL
HPTPGVTQAASLTPEAVTEDVRRIANSLFKALKTPSLTSAPDLEKSTNINTLLSLIEDVI
CQQNRAGQRFYDESKKDGPITVTLDAMDIQEKTRSPTPEKRICDQLKYSDYRCCLYMQLQ
HVEMELELLGAHKFQMPQSYTQAVCQVQHMKNVLEISRWSHTPYLSSDDKKSSSPRGLPW
WFVFIAWFLVAATSGVSGFFTMLYGLHYGKENSIKWLISMVISFLESLFITQPLKVLGFA
AFFALVLKKVEHEDEENTAIDGPLSAPGDSRPLFGVRRDSRSNIYRPPPAADVEKMKISC
MKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIEDSFTDGFRDVYSYQDFF
TWANTTLLKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCPISHRLQHVVEECHAPYS
LQTEDTSVYGEHWNTSVFDNSSELSSAWQYQSQSKLRGHPSWGKLAVYGGGGYVIHLGTD
PKNASRILQYLFNNVWLDTFTRAVFVEFTVYNANVNLFCIISLMFESNALGAFFTSAELQ
SVRLYPYTNSLHIFVVAAEVIYFLFIVYYMIVQGKLLKSLRWRYFQSKWNLLEMAIILIS
WSALSVFVKRTVLGTRDISYYQEHKDDSISFSETARADAVLGYLIAFLVLLSTVKLWHLL
RLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIAANLIFGWKLYSYKTLLDSAETMV
SLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASEEE
EIVDLMLMKLFSFFGIKCKKEEKPVSGDQLEQSVSE
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcaagcttttgaagaaggcagcaaaaagagtggtgccctggaaagcaagaca
agtgtgacacacagcactgagctgagaatgtggctgggggtcacagttctgatttctctt
gctgtgtgcttggctgtggaggaagcagctgatgaaggaataccttgtgcaaagtaccag
caagctttcaaccattcatgctatgagtttgttagactccagcaaaccttcacaggtgcc
cagagctggtgtgagagaggaggagggcaccttgtctttattcaaaatgaggacactcaa
gagttcttgcagaaacatattgctgaggatcaggaatggtggataggactgatctcaaac
tccttgctgaatgaaactactgatgggtcaataacttggctggacacttcaaatataagc
tacagtaactggtacaaggatcagccatcttcctcctcatccacatgtgggtacattctg
aagaatgccaagtatcagtggggtgtgactgaaaattgcagccaagaatttgacttcatt
tgcgagtttgaatctggccagagcattgcttgtgataattacaatgccactgtacagtgt
ggatcaggagaagttattcaaattgaagagagcttctatggacggaagacccgtcactac
tgtgtgtcagagactcctctccagctggaaacagacgaaggctgcagctggatcagtgtc
aaggatgaagtagcaggccagtgtcatggtctgcaggcctgccaggtggcagcagatggc
actttctttggagatccttgtccagctttgggaagttatttgtctattcaataccactgc
aaggaaggtctgcacctggttatgacagatacatgttttgtccttgaaaacatcacagtc
actttgaactggctgctctcaccatactctgggaatctttcctgtaccattagcactgga
gatggtcacactattgatccttactaccctctaagcctggtcagcaacctcacatacagc
tactcctctcctggggagttcacagtgtttgtggagtgcagcaccagcgagtggcacgtg
atggcacagaggcaggtgactgtgcaggatcaagtggatcagctcagcgttactgggtgc
tacagccagcatgaaacagggaacggctcccagtgccgtacgctctatggggacgtgctg
tggatccaagttcagctcagtggaggcaatggagtaacctacagtatattagcagataac
atgacactgactgaatctagtgcaaaagaaggccttgtcccccataacctgacactcaac
agtgcctctcaagagctgctaggcccagggatacatcagctggaaatccgagcatcccgg
gacacggcatcggagatctccgggagtattgctgttcatttaattgagccagtatctgga
attcaggctgcagtagcttcccacactctgcagctgggggaggatttggaggtgaatgtc
tctgtgttccatggtgccccagagaagctgatgtttgaggtgattggatccaaccaaacc
cactgtcacaaagcagagggccctcgtggggagccgcggacgtacagcgttcccatgccc
ttggaaggtacttttctagtgaaagtggttgccatgaatgccttctcaaacatgagtctg
gatcttggattcatcactgtgctggcaaacagttcccataaaaaagattctgctaaggaa
gaagacagctacaaaacaaatacccaaaagaaaaatgatcacaaaatatatattaaaccc
agtcgccatgtggatcctttcacaactgttacacttggctggccagaaaacaacaagaat
tccagttttctctggacctgtggagcttgctggcctgcctggaatgaatgtgtgaagcaa
cagataatcctaaccaaccaaagtgaggtgcaaatcccatcttcctgccttcctcctccg
aaatcagcagtgaccgtcaggattaccgtccaaagccatggcagtgaagtgaggcaggat
gagcaatgtctctatgtgactgcaaaacaagaactgcaactggaaatcaggtgtgaggca
aactgcaagccagtgaatgttagtgatgaagttgttttgagtgtctcgggacaggaggac
tcccaggccatatattataactggtatttagataacacattccaaaacaagcctacaacc
ctccctctagcctgtggcctgactggtttccagcagaactctttgaatttgcttcaaagc
aacacatctgtgttgagaatgaccagctccttcttgcagacacagggagaagcttttcag
attaaagtaacaggcacgactcagcgaggttacggggagggatggttcctgctgagcacc
gtgccccctcccgaagcccccggctgtgcggtgagccccgagcacggctcggtgctcacc
gccttcagactctcctgcggcgctcccggctcggaggggtcgggccggtccagccctagc
aggcagctcacatattgcttctatgtgacaccagattctctcctggactgtagcccggat
cctgaactttttccagtttatcttccacttggagaagaggaaaataattttattttacat
gtgacaattattgttagcaacaactttggtgatacagttcgaacaaatgtttcagtgaag
gttggacttgcagatatgatggatgggaacctgaccctgcaggctgtgatatctgagaag
gcaaacaccatcctaaaagatggcaacaacagcatgagtctcttccagctgtacaagtca
gtgacgtctgtccttaatcagcagaaccaagaggaaagttttaacatgtctttacagaca
aacacacgaaaagagctccgagggctgatgctgacaactctctctgttgttaacataaca
tcaatgcagactgctctgaagatgtcagaggtactgaaagaaatcacttacaggagtgag
gagctctctgtctcagcacaggtggaagccagcaacactctgaaacatgtcagtgcctcc
ttgctcgctgtaaacatggagcacagcagagatgatcaggagttaaaggaagcagccaac
tatctgtttaatgcagtgagcaatgttcttaaagcttctgtagaaatcagagctgcgaac
acttcaatgccagaggcagaacagagttcagtgtcagaccagctcctgagtacagttgaa
aatcttcagagtgcccttttgtttgggaaggcaccgggtgatgagccaacagtcgtcacc
tctccctctgccacaatgtatatgcacagattacaaacagaaaacatggatagcacattc
attaccatctccaattccagctctgccagctttactctcccacctgcttcctctctcaat
gtttcaggagttgatggtgaaacagtggatataaggatggtgagctttgccatgaatccc
tttttctccagtgatggcagttttgacatcagtggaacagtgggaggtctaagtctaact
ggtctggatggtttgattataccagtcagcaacctcaaagagaacattgagatcatgtta
ccgaggctttcagcaactcaggaagataagattctgttgaatctgggcaattatagcact
tttcaagtcaatgttacctcagaaaacacatctatagtgatccacctggaatctgaacat
gacattccactaatactttacttggggtatggttatcacccaaatgaaaccaactatgat
atgaaaaatcatctgttctataagaaaacttctggaggtgagacaaacagctgggttctc
agcccagaagaactaatttttggagagggaacctactatttcatggttttacaagatatg
ggaatggattccacagtctacagtgggctaattataaatgccacttgctttgcatcccgc
tgtgtattttgggatgagcaccaaggaggctggaacagctatgggtgtcacgtaggacca
aaaacaaatcctagcagcacacagtgcctctgcaaccatctgaccttctttgcgagctcc
ttccttgtcatacccaacgccatagatgtcagcaaaacagcacagatgtttggtacattc
gtggacaatcctgtggtggtgacaactgtaggatgcatctttctgatatatgtgcttgta
gttatttgggctcgaaggaaagacatccaggatgatgccaaagtgaaaatcacagtcctg
gaagacaatgacccctttgctcggtaccgttaccttgtgacagttttcacaggacaccgc
cgtggcgcagccacaacctccaaggtgactctcaccctctatggactggatggagagagt
gagccccaccatctaaatgatcctgatacaccagtctttgagcgtggtggagtggatgtt
ttcctcctctgtaccttcttccctcttggggaactgcagagtattagattgtggcatgat
aattcaggggacagtccatcctggtatgtgaatcgagtattagtccatgatctggcatgg
gatcagaagtggtatttcctctgtaactcctggctagccattgatattggagaatgtgtc
ctagataaagtgttcccagtagcaacagaacaggacatgaagcagttcagcaatctgttt
ttcatgagaacctccaagggtttccaggatggacacatctggtactcggttttcagccgc
tccccacgaagctccttcacgcgagcccagcgtgtgtcctgttgcttctcgctgctcctc
tgcaccatgctgaccagcatcatgttctggggtgtgccaaaggatcctgctgagcagaaa
atggatttgggtaagatcgagttcacatggcaggaagtgatgattggctttgagagctct
ctcctcatgttccccatcaacctgctcattgtgcagatcttcaggaacgtacgaccccgg
ccagcccagcagagcagagagaagaagccgggaaggaatggccaagtgtccccaggcctg
catcccaccccaggggtcacccaggctgcctctctcactccagaggctgtgacagaggat
gtaagaagaattgccaactcactctttaaagccctgaagactccatctctcacctcagca
ccagaccttgaaaaatcaactaatatcaacacactcctgtcattgattgaggatgtcatc
tgtcagcagaacagagctgggcaaaggttttatgatgagagcaagaaggatggacctata
actgtcacattggatgctatggatatccaagaaaaaacaagaagtccaactccagagaaa
agaatttgtgaccagctgaaatacagtgattatcgttgctgcttgtacatgcaactccag
catgtagagatggagctggaattactgggggcccataaatttcagatgcctcagagttac
acacaagctgtttgtcaggttcagcatatgaagaacgtcctggagatctcaaggtggtcc
catactccatacctgtccagtgatgacaagaaaagttcttctcccagagggctgccctgg
tggtttgtgttcattgcttggttccttgtggcagccaccagcggtgtgtccgggttcttt
accatgctctacggactccattatggcaaggagaactccatcaagtggctcatctccatg
gtcatctccttcttggaaagtcttttcatcacacaacccttaaaggtgctgggatttgct
gctttttttgctctggttctgaagaaggtggaacatgaggatgaagaaaatacagctatt
gatgggcctttatctgcaccaggtgattcacgccctctctttggggtccgaagggacagt
aggagcaatatttaccggccacctcctgctgctgatgtggagaaaatgaaaatcagctgc
atgaaggagcagaaagcatttgccctcatcagagaaatcctggcctatctggggttttta
tggatgctgttactcgttgcctatggacagagagatccaaattcctactatttaaacaaa
cacattgaggacagttttacagatggattccgcgatgtctacagttaccaggattttttc
acgtgggcgaacactactttactcaaaaatctttatggatcgtataaaggattcattaca
gatggcaattccaagctggtgggtagtgctcgaattcgccaagtaagagtgaaaggagac
acctgccctatttctcacagacttcagcacgtagttgaggaatgccacgctccatattcc
ctacaaacagaagatacatcagtttatggggagcactggaatacctcggtttttgataac
tcctctgagttgagctcagcatggcagtatcagagtcagtccaaactgagaggacatccc
agctggggtaaacttgctgtctacggtggagggggatatgtgattcacctgggaactgac
cctaaaaatgcctccagaattctccagtaccttttcaacaatgtctggcttgacaccttc
acaagagcagtgtttgttgaatttacagtctacaatgccaatgtgaacctcttctgcatt
ataagcctgatgtttgaaagcaatgctttgggggcgttcttcacaagtgcagagctgcaa
agtgtccggctctacccctacaccaacagcctccacatctttgtggttgcagcagaagtc
atttatttcctctttattgtgtactacatgatagtacagggaaagctgctgaagagtctg
agatggagatacttccaaagcaagtggaatctcctggagatggccattatattgattagc
tggagtgctctgtcagtgtttgtgaaacggacggtccttgggacccgggacatcagctac
taccaggaacacaaggacgactccataagcttcagtgaaacagcaagagctgatgcagtt
cttggctacctgattgcattcctggtgcttctctccacagtgaaactgtggcatctgctg
aggctcaaccctaaactgaacatgatcacttcaacactaagaagggcatggggtgatatc
tctggattcatcactgttattgcaatcatgttcctcgcctattccattgctgcaaacctg
atatttggctggaagctctactcttacaaaactctccttgattcggcagagaccatggtc
agccttcagctgggaatcttcaactatgaggaggtcttggactacaatccaattttaggc
tccttcttgattggatcctgcataatttttatgacattcgtggtactgaatctgttcatt
tcggtgattcttgttgcttttagtgaggagcagaagcattaccaggcttcagaagaagag
gagattgttgatctaatgttaatgaaactcttcagtttctttgggataaaatgcaagaag
gaagagaagccggtcagcggcgatcaactggaacaatctgtcagcgagtga
DBGET
integrated database retrieval system
