Hirundo rustica (Barn swallow): 120757973 Help Entry 120757973         CDS       T09369                                  Symbol NLRC5 Name (RefSeq) protein NLRC5   KO K22615   NLR family CARD domain containing 5 Organism hrt  Hirundo rustica (Barn swallow) Brite KEGG Orthology (KO) [BR:hrt00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:hrt04054]     120757973 (NLRC5) Pattern recognition receptors [BR:hrt04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    120757973 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT Atypical_Card LRR_4 NLRC4_HD2 LRR_8 NPHP3_N AAA AAA_16 LRR_NXF1-5 AAA_22 AAA_19 NOD2_WH RNA_helicase nSTAND3 Bac_DnaA Motif Other DBs NCBI-GeneID:  120757973 NCBI-ProteinID:  XP_039931663 LinkDB All DBs Position 11:6546931..6580301 Genome browser AA seq 1862 aa AA seqDB search MQPPSASEDPDLRAAVARARPQLVELLTPCPDWLLSTCQRFVPEAALSSLAGISEPRAKT SLLLDLLEEAGPAAWKHFAQSVCMEYDLPLDLEVLLMSSAGEGNFSQTEDAGRDTRVQSS GYDMLPVPKGSACRRRHSGSGSDKDAKQRRLDSSVKYRHLLISSIRQRYGSRREAGAEAQ TQPLPFNQTFVNVVIRESKAPRLKERAEKAREDVAGAPEAEECADTAVKVSDLLCSEAPK HTTKVIFLFGKPGTGKTRLMHRICQKWAEGVLPQFLFTFLFEFRQLNLLKRKLTLKELLF EVFLQPEDSPDAVFQGLLENAQQTLIIFDGLDEFAANMDVSSSSRRGPALTSPVSISQLF ADLCHGKLLPGCTVLVTSRPKRLPDFLLYTVSVLAEIWGFDHEKVEEYVGHYFRQHSFRE RAIAHVKGNTKLLSMCLIPALCNVVCICLEYLLLKHQMSVELPQTMTQFYIKMFLIFLNK QQGDCAGDEETQLNCNKKAILGLFDLALRGLEEKKLVFYDGDIPEDVKEFASLHGLLTVF EVKTSSPCPEVGYAFVHLSLQEFFAALCLMVSRRVDKNHLKKKFFLKSKWTLKNETKTEF METFHIFLSGLSSRECRTFLALLAERDEAWVQEKQDVILQSLKKLAATHLSGPKALELCH CTFETQNPEVAQHIGSLLNFKYEFKNFRLTTLDMSALVFVINSGQDLICLDFAGCLVDTD CLEVLAGCKNVEHLSFRSRRCGDDFAAALSKGLQGMGSLKKLELTGGSVTAEGMTSLVQA ASQCPQLEEINLQGNRIRDPEVKRVMDLLSKMEKLKKVDLSKNHLSLNAVLSLAKEGIAC QNVTGLCARVDTVIISFSGASGKVRRSSDWNLEENKEHVTPTRHVNLRLQDHRLSSQHAK MIVAILQSCPCLSEVDLSGNKLGDEGCSCLLESLPCLSISKQLNLSENRLSVTGICSLLK SVNTCQKVMEVQVSLCHDTAVLRFREDREFASPPPREEPVLSTDHQQHGEEHQTPPTSQR IRLTDCNFQASDLRNLWAALKGCGHVSELDLSRNHLGDEGLLQLFQCLPKLKMLRSLKFH DNQISLNSVFFLAQSLTALQHIKTVSLSLGHTQVVHLTFWERVRSTSRWRRGSLAHPKQE AKARCFSLRDCRVGAEDVTRLCQMLARCPQLTELDLSGNSLSDQSIERLLSFLPSLCHLT ILSIRKNSLSPRCAVSLLNSINLCERIRVVEVRSCENAFLHLGASTRGQRTSCRLTGCAI GEGQVEELCSILEQHGRLAEVDLSRNQLGDEGLRCLLDHLHRVPGTCSLNLSHNGISQDG VLHLINAFVTSGNTAEVQVSLCSKATLIIKLTREDDPRKILRLAECNFQPEHLEKLFLLL ERCTGLTEYTSSNNNMTVQAAERLLHSLRKDLGLLKISIEEPWVCTERVMNLLELAVQAS GNVTEITICKDKTLFQLVTRFPHCLETESVISRLSLYKPELKHSSCQRLCEKCAQLQELR WSHVELHEEEAEMLVRILLRLPELKVFGLTSSSASPAGIDHLISGLQNCQAIEELNLGYM KLSSAAIPALVLRLCEMPSLKRLILNHNSIGDDGCSRLAEALRKMHDLEEINLSHNQIGD PGLINLAAVLLEMEKLKKIDLSGNCPSPAGGEKLMEALAHCKHIKELLLSRNGFGDRTAG TLALCLPHMTSLRILHFQNNNIGQAGGLELARALVVCELLEEISLSENDLGEQSVRALSQ GLPCFKHLRKIDLKCCGISDDASKSLSLGFRQCPSVEEIILSWNALGDGGARELATALPK LEKLKVLDLEKNRIGACGATELAEELAKCPEIQLIRLWDNPVPKGLAESLTSQDPRLCFS FN NT seq 5589 nt NT seq  +upstreamnt  +downstreamnt atgcagcccccatctgcgagtgaggatccagacctgcgagcggccgtagccagagcccgt ccccagctggtggagctcctcactccgtgtcccgactggctgctctccacctgccagcgc ttcgtccccgaggccgccctgagcagcctggctggcatcagcgagcccagagcaaaaacc tccctgctccttgacctgctggaggaggctggacctgccgcctggaaacactttgcacag tctgtctgcatggagtatgacctgcccctggacctggaggtcctgctcatgagctctgca ggagaaggtaacttcagccagacagaagatgcaggcagagatacaagagtccagtcatcc ggatatgacatgttacctgtgccaaaagggtctgcttgccgtcgccgtcacagcggctct gggagtgacaaggatgccaaacagcgacgactggattcatctgtgaagtaccggcacctc ctcatcagttccatccgccagaggtacggaagcaggagagaagcgggagcagaagcacaa acacagcccctgcctttcaaccaaacctttgtcaacgttgtcattcgtgagagcaaagcc ccccgcttgaaagagagagcggagaaagcccgagaggacgtggcaggagctcctgaggca gaagaatgtgcagatacagccgtgaaggtgtcagacctgctttgtagtgaggccccaaag cacacaacaaaggtgatctttttatttggtaaaccaggtacaggcaagaccaggctaatg cacaggatttgtcagaaatgggcagaaggtgtcctacctcagtttctcttcactttcctc tttgagtttcggcagctgaatttgttaaaaaggaaattgaccctgaaggagcttttgttt gaggtgttccttcagccagaggacagccctgatgcagtgttccagggcctcctggagaat gcccagcagacactgatcatctttgatgggctggacgagtttgcagctaacatggacgtg tcatcctcctctaggagaggcccagctcttacctcccctgtgtccatatcccagctcttc gcagacctctgccacgggaagctcctgcctggttgcaccgtgttggtcaccagccgacct aagaggctacctgacttcttattatatacagtaagtgtgttggcagaaatctggggcttt gaccatgagaaggttgaggaatatgttggccactattttcgtcagcattcattcagagaa cgagctattgctcacgtgaagggcaacaccaaactcctcagcatgtgcctcatccctgct ctgtgtaacgttgtgtgcatctgcttggagtacttgctccttaaacaccagatgagtgtg gagcttcctcagactatgacgcagttttatatcaaaatgtttctcatcttcctcaacaag cagcaaggagactgtgcgggtgatgaggagacgcagctgaactgtaacaaaaaggccatt ttaggtctgtttgatcttgcactgagaggcctggaagagaagaaacttgtattttatgac ggtgatattcccgaggacgtgaaggaatttgcttccttgcatgggttgctgactgtcttt gaggtgaagacgagcagcccttgcccagaggttggctatgccttcgtgcacctgagcttg caggagttttttgcagcactgtgtctcatggtgagtaggagggtggacaagaaccacctg aagaagaagttcttcttgaagtcaaagtggactttaaagaatgagacaaagaccgagttt atggagacttttcacatattcctctcgggcttgtcgtcaagagagtgtaggacgtttctc gcgctgctggcagagcgagatgaagcttgggtgcaggaaaagcaggatgtgatcctgcag tctctcaagaaactggcagccactcatctgtcagggcctaaggcccttgagctctgccac tgcacctttgaaacacaaaaccccgaagtcgcccagcacattgggagcctgctgaatttc aagtatgagtttaaaaacttcaggctgacgacgctggacatgtcggccttggtcttcgtc ataaactcgggccaggatttgatttgtttggattttgcaggatgtcttgtggacactgac tgtttggaggttctggctggctgtaaaaatgtggaacacttgagctttcgtagcaggaga tgtggcgatgactttgctgctgctctttcaaagggcttacaaggaatggggagcctgaag aaactcgagttgacaggcgggagcgtcacagctgaggggatgactagcttggtccaggct gcatcacagtgcccccagcttgaggaaataaacttgcagggcaatcggatacgggatcca gaagtgaagagggtgatggacctgctttccaaaatggaaaagctgaagaaagtagacctg agcaagaaccatctttccttgaatgctgtcctcagtttggcaaaggaaggcatcgcgtgt caaaacgtcaccggactgtgtgccagggtggacaccgtgattatttctttttctggcgcg tctgggaaggtcagaagatcttcggattggaatttggaagagaataaagaacatgtaacc ccaactagacacgtgaatttacgcttgcaggatcacaggctgtcttcccaacatgccaag atgattgtggccattctccagagctgtccctgtctctctgaagtggatttatcaggcaac aagcttggagatgaaggctgcagttgcctgctggaaagcctcccctgtttatcgatttca aagcagctgaatctcagtgaaaaccgcctctctgtcactggcatttgcagcctgttgaag tcagtaaatacctgccagaaggtgatggaggtgcaggtcagcctttgtcatgatactgct gtcctgaggtttagagaagacagggagtttgcttcccctcctcctagggaagagcctgtg ctctctactgatcaccaacaacatggggaggaacaccagacacctcccacctcccaaagg ataagactgacagactgtaactttcaagccagtgacctgaggaatctgtgggcagcgctg aagggatgtggccacgtctctgagctggacctatcacgtaatcatctgggagatgaggga cttctgcagctgtttcagtgcctcccaaaactgaaaatgttacgttctctcaagtttcac gacaaccagatctccctgaactcggtgtttttcttagctcagtcattaactgcactgcaa cacattaaaacagtgagcctcagcttgggacacacacaggtggttcatctgaccttttgg gaacgagtcaggagtaccagcagatggaggagaggttccctggcacatcccaagcaggaa gcaaaagcacggtgcttcagtctcagggactgcagagtgggtgcagaggatgtgaccagg ctgtgccagatgctggctcgatgtccccagctgacagagctcgatctgtctggaaattca ttgagtgaccagagcattgagaggttactgagctttctgccatccctctgtcatctgaca atactgagtattaggaaaaactccttgtccccacgttgtgccgtttcactcctcaactcc atcaacctctgtgagcggatccgagtggtggaagtccggtcatgtgaaaatgccttcttg catttaggagcaagcacacgaggccaaaggacgtcctgcaggctgacaggctgtgccatc ggggaagggcaggtggaggagctctgcagcatcctggagcagcacgggcggctggcagaa gtagatctctccaggaatcagctgggagatgaaggcctgaggtgcctcttggaccacttg catcgagtgcccggtacctgctccctcaacctcagccataatgggatttctcaggatgga gtcctgcatctcataaatgcctttgtcacctctggaaacaccgctgaagttcaagtcagt ttgtgctccaaagcaactttaatcatcaagctgacaagagaagatgacccaagaaagatt ttgagactggcagagtgcaacttccagccagagcacctggaaaagttgttcttgctcctg gaaaggtgcactggtctgacagagtacacgtcctcaaataacaacatgacagtccaagct gcagaaagacttttgcattccctgaggaaagatctggggctgctgaaaatcagcatagaa gagccatgggtgtgcacagagagggtcatgaacctcctggagctggctgtccaggcctct ggaaacgtgactgagatcacgatatgtaaagataaaaccctcttccaattagtcacaaga ttcccacactgcctggagacagaatcagtcattagcagactgagtctgtacaagccagag ctcaagcactcctcctgccaaaggctttgtgaaaaatgtgctcagcttcaggagctgagg tggtctcatgtggaactccacgaggaggaagcagaaatgctagtcaggattttgctgcgc cttccagagctgaaggtgtttgggctgacctctagcagtgcttcgccagctggaatcgat catttgatctcaggcttgcagaattgccaggccattgaagaactcaacctgggctacatg aagctcagcagcgctgccatccctgcgctcgtgctgaggctctgtgagatgccatccctg aaaaggcttatcttgaaccacaacagcatcggtgacgatggctgctccaggctggcagaa gccttgaggaaaatgcacgacctggaggaaatcaatttaagccacaaccagataggagat ccaggcctgataaatcttgctgcagtcctgctggaaatggaaaagctgaagaaaatcgac ctttcggggaactgccctagtcctgctggaggggaaaagctgatggaagctcttgcccat tgcaagcacatcaaggagttactactatcgaggaatggctttggagacaggacagcaggg acacttgccctctgtctgcctcacatgaccagcctgaggatcctgcacttccagaacaat aacattgggcaggcaggagggctggagctggccagagccctggtggtgtgtgagctcctg gaagagataagtttatcagaaaatgaccttggggagcagagtgtccgtgccctgtcccag gggctgccgtgcttcaaacacctccgcaagatcgacttgaaatgctgtgggatctctgat gatgcttcaaaatcgctctccctcggcttccgacagtgcccttccgtggaggagataata ctgtcctggaatgcccttggagatggaggagcccgagagctggccactgctctcccaaag ctggaaaagctgaaggtgttagacctggagaaaaaccgcatcggagcctgtggggccaca gagctggcggaggaacttgccaaatgcccagaaattcagctcataaggctgtgggacaac ccagtgcccaagggcctcgctgagagtttgacaagccaagacccaagactctgtttctcc ttcaactag

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