Hirundo rustica (Barn swallow): 120757995
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Entry
120757995 CDS
T09369
Name
(RefSeq) fractalkine-like
KO
K05508
C-X3-C motif chemokine 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04060
Cytokine-cytokine receptor interaction
hrt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120757995
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120757995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hrt04052
]
120757995
Cytokines and neuropeptides [BR:
hrt04052
]
Cytokines
Chemokines
120757995
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
120757995
NCBI-ProteinID:
XP_039931690
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Position
11:complement(6788318..6794468)
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AA seq
465 aa
AA seq
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MSGQHLCCSGGCNKQPGVGNTAGNPSLPAFPSAHHGNMKAACGRILLPPLWALCLVTLAG
GQPKAPLKCSIECRGFTRQLAEKQIRSYRMTEPSCKKQATIFITLKFKEICADSREDWVQ
KIKDKLDRKKATVVPPHDVTSGKEPGSLERRVGLPEVAPSQATAPASFFQGTGTTLRERT
HAPAARTEVSSKSPLGRQDPTQLPAGSTPMTQEEAAHSEVTPAAHRESSNSPVSSTTVTA
DVGSSQPSPHPSVPGTASPNSHSDLMAAAKGSNQPVLSTNGSLDPTSARANTPDTASRSS
RSDLPSIWDTMKNTTDTETAPQTTSISTLISTGAMDKAASVHTNRVVGPSADVFGTTAFD
YSSPVGKQEPSNTVSSHQTFSGQARVQMITVRPKNLPLPSFLSESQMHFVIPVSVVCGLM
VSSVALVWLYLKFGVKPEETSREMVQGLLYQQAGHQDNVYPMEVI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccagcatctgtgctgctccggaggatgcaataagcagccgggagtgggaaat
actgccggtaatccctccctgcctgccttcccttcagcccaccacgggaacatgaaggct
gcctgtggccggatcctgctgccgccgctgtgggccctgtgcctggtgaccctggctgga
gggcaaccgaaagcgcctctgaagtgttcaatagagtgcagaggttttacaaggcagtta
gcggagaagcagatcaggagctaccgcatgacggaacccagctgcaaaaaacaagccacc
atatttattactctgaagttcaaggagatttgtgcagattcaagggaagactgggtgcag
aagatcaaagacaaactggacaggaagaaggccacagtggtgccaccacatgatgtcacc
tcaggaaaagagcctggcagtcttgagagacgtgttggtcttccagaagtggctccatct
caagccactgctccagctagtttcttccaagggactggaacaacgcttagggagagaaca
catgctcctgctgccaggacagaggtgtccagcaagtccccactgggcaggcaggaccct
acccagctccctgcaggatccacccccatgacacaggaggaggctgcacactctgaggtc
actccagcagcacacagagagtcctcaaattctcctgtgtcttcaacaactgttacagca
gacgtgggctccagccagcccagcccacacccctctgttccaggtacagcttctcctaac
tcacattcagacctgatggctgctgctaaaggatcaaaccaacctgtactttctacaaat
ggatccctggaccctacaagtgccagagccaacacaccagacactgcttccaggagctct
agatcagatctcccctccatctgggacactatgaagaacacaacagacacagagacagca
ccacagactacttcaatttctactctaatctccaccggtgctatggacaaagctgcttct
gtccataccaacagggttgttggtccctctgcagatgtgtttggtactacagcatttgat
tattcatcgcctgtagggaagcaagagccttcaaacacagtttctagtcaccagacattc
tcaggccaagccagagtgcagatgatcacagtcaggccaaaaaatctgcctctgcccagc
ttcttatcagagtcccaaatgcactttgtcatcccagtttctgtggtgtgtggactgatg
gttagcagtgttgctcttgtatggctttacctgaaatttggagtcaaaccagaggaaaca
tcaagagaaatggtacagggcttgctctaccagcaggcaggacatcaagacaatgtctat
ccaatggaagtaatatga
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