Hirundo rustica (Barn swallow): 120758066
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Entry
120758066 CDS
T09369
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120758066 (TMF1)
Membrane trafficking [BR:
hrt04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120758066 (TMF1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
SlyX
Motif
Other DBs
NCBI-GeneID:
120758066
NCBI-ProteinID:
XP_039931783
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All DBs
Position
12:complement(16061215..16076510)
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AA seq
1106 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEETPWPDAVIPDYGDGTNSLTSGGWDTS
SWGLSSNTEPQNQPVSPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKESQHSNQLEGAVTTEAEVKDSSIAALDLKSLDIPKEKSEENAVLKSD
AQPEASSNEVPDKKVSALNFEEPEDSPTEKSSVGGDGAAGAPEGTSQPLGAGTKDLALEG
KERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHLM
QTSFQLLSTSACADYNRLDDFQKMTESCSSSDAFERIDSFSVQSLDSRSVSEINSDDELS
GRASASASVAVSPSVPKTETVDTLKNKSENLTDAPVLHAEEAEMEESGRSATPVNSEQPD
VVLVAAVQTVEEQVVKEEAEPQQDAGEQLVEEDTEKQELKKMIASLTEKLEKREIQLLST
SKERARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEV
KTVKEELATRLNTNETAELLKEKEEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
VNTKQSKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLAKLQAEVEE
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQEEAR
QQQEALAIQVADLRLALQRAEQQAARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLANKIQM
SSSESQNSLLRQENTRLQAQLEVERNKLKKMENENSRYEVELEGLKDEYAKTLEDAKKEK
ALLATQLEMEKMKVEQERKKAILVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGSGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctgtccagcttcgccaagcaggcgctgtcgcaggcg
cagaagtccatcgacagggtgctggacatccaggccgaggagaccccctggcccgacgcc
gtcatccccgactacggtgacggaacaaattctctcacaagtggaggatgggacacatct
tcctggggcttgagctcaaacacagaaccccagaatcagccagtgtcacccacagccatc
acgaagccggtgaggaggacggtagtggatgaatctgagaacttcttcagtgcctttctc
tccccaacagacgttcagagtatacagaaaaacccagtggtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagtctcagcactccaatcag
ctggaaggggcagtgacaacagaggcagaagtgaaggattcctccatagctgccctggac
ttgaaaagccttgatattcccaaggagaaatcagaagagaatgctgtgcttaaatctgat
gcccagcctgaagcaagctcaaacgaagttcctgacaaaaaggtgtctgctctaaatttt
gaagaacctgaagattctcctactgaaaaatccagtgtaggaggggatggagcagcaggt
gcccctgagggcacttctcagccccttggagcagggacgaaggacctggctttggaaggg
aaggagagaaagactgaggacaggcaaagcaataccccatcacctcccatcagcaccttc
tcctcaggcacttccaccacaagtgatattgaagttctggaccacgaaagtgtcataagt
gagagctcagtaagctccagacaagaagctgcagattcaaaatccagccttcacctcatg
cagacgtcgttccagctcctatccacgtctgcctgtgcggattataatcgcttagatgac
ttccagaaaatgaccgagagctgcagctcctcggatgcctttgaaagaatcgattcattc
agtgtgcagtccttggatagcaggagtgtcagtgaaataaattcagatgatgagttatca
ggcagggcttctgcctcagcgtctgtcgctgtcagtccttccgtgccaaagacggaaacg
gttgacaccctgaaaaacaaatctgaaaacttgactgatgctcctgtgttacatgctgag
gaagctgagatggaagagagtgggagaagtgcgacccctgttaattctgagcagccagat
gttgttttggttgctgctgtgcaaactgttgaagaacaggttgtgaaggaggaggccgag
ccccagcaggatgctggggaacagttggtagaggaggacactgaaaaacaagagcttaaa
aagatgattgcttcattaactgagaagctggagaagagagaaatacagttattaagtact
agtaaagaaagggctcgcttggaagaagcttatgataacctcaaagatgaaatgttcaga
atgaaagaagagagcagcagcctttcatctcttaaagaggagtttgctcagcgaattgca
gatgctgagaagaagctccaactagcctgcaaagaaagagatgcagctaaaaaggaagta
aagactgttaaagaggaattggctactagacttaataccaatgaaactgctgaattattg
aaagaaaaagaagagcaaatcaaaggattaatggaggaaggagaaaagctttccaaacag
cagctgcacaattccaacattattaagaaattaagagccaaagagaaagagagagaaaat
gttaacacaaaacagagcaaaaagattaaggaattggaagaggagttgcagcatttaaaa
caggtgcttgatggcaaggaagaccttgagaagcagcatcgagacagcattaaacagctg
aacagtgttgtggagagacaagaaaaggaccttgctaaacttcaggcagaagtggaggaa
cttgaagaaaggaacaggagtgtgcaggcagcactcgacagtgcgtacaaggaacttgca
gatcttcataaagctaatgctacaaaggacagtgaggctcaggaagcagccctgagtcgg
gaaatgaaggcaaaggaagagcttgggttagcactggaaaaggcccaggaggaggctcgg
cagcaacaggaggctttggcaattcaggtggcagacctgaggctggcactgcaacgtgca
gagcagcaggcagcaagaaaagaagattatttacggcaggaaattggtgaactacaacag
agactccaagaagcagagagcaggaaccaagagctgagccaaagcgtcacctctgctacc
cggccccttctgcggcagatagagaacctgcaggccacgctgggagcacagacctctgca
tgggagaaactggaaaagaacctttctgacaggctgggtgagtctcaaactcttctagca
gcagctgctgagagagaacgggctgctacagaagaacttcttgctaataaaattcagatg
tcttcttctgaatctcaaaatagtcttttaaggcaagaaaatacccgtcttcaagctcag
ctggaagtggagagaaacaaactgaagaaaatggaaaatgaaaacagcaggtatgaggtt
gaactagaagggctcaaagatgagtatgcaaaaaccttggaagatgcaaagaaagaaaag
gcactgctggctactcagttagaaatggagaagatgaaggttgaacaggagagaaagaag
gctattctcgtgcaagaagcagcaaaggagaaggaccgaaagtcatttacagttgagact
gtatcaagtacgccctcaatgtcccgctccagttccataagtggggtggacatggcagga
cttcagacctctttcctctcacaggatgatcctcatgatcactcatttggaccaatagct
accagtgggagcaatctctatgatgcaataaggatgggatcaggttcaagtataattgaa
aaccttcagtcacagctaaaattaagagaaggagagatttcacatctacagctggaaatt
ggaaacctggagaaaactcgatcaataatggcagaagagctggttaaattaacaaatcaa
aatgatgaacttgaagaaaaagtgaaggaaatacccaaattacgcactcagttaaaggat
ttggatcagaggtacaacaccattctccagatgtatggggagaaggcagaggaggctgag
gagctccgactggatctggaagatgtgaaaaacatgtacaagactcagatagatgaactt
ttaaaacagagacaaaattaa
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