KEGG   Hirundo rustica (Barn swallow): 120758066
Entry
120758066         CDS       T09369                                 
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
  KO
K20286  TATA element modulatory factor
Organism
hrt  Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hrt04131]
    120758066 (TMF1)
Membrane trafficking [BR:hrt04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    120758066 (TMF1)
SSDB
Motif
Pfam: TMF_TATA_bd TMF_DNA_bd CCDC39 SlyX
Other DBs
NCBI-GeneID: 120758066
NCBI-ProteinID: XP_039931783
LinkDB
Position
12:complement(16061215..16076510)
AA seq 1106 aa
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEETPWPDAVIPDYGDGTNSLTSGGWDTS
SWGLSSNTEPQNQPVSPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKESQHSNQLEGAVTTEAEVKDSSIAALDLKSLDIPKEKSEENAVLKSD
AQPEASSNEVPDKKVSALNFEEPEDSPTEKSSVGGDGAAGAPEGTSQPLGAGTKDLALEG
KERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHLM
QTSFQLLSTSACADYNRLDDFQKMTESCSSSDAFERIDSFSVQSLDSRSVSEINSDDELS
GRASASASVAVSPSVPKTETVDTLKNKSENLTDAPVLHAEEAEMEESGRSATPVNSEQPD
VVLVAAVQTVEEQVVKEEAEPQQDAGEQLVEEDTEKQELKKMIASLTEKLEKREIQLLST
SKERARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEV
KTVKEELATRLNTNETAELLKEKEEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
VNTKQSKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLAKLQAEVEE
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQEEAR
QQQEALAIQVADLRLALQRAEQQAARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLANKIQM
SSSESQNSLLRQENTRLQAQLEVERNKLKKMENENSRYEVELEGLKDEYAKTLEDAKKEK
ALLATQLEMEKMKVEQERKKAILVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGSGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQN
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgagctggttcaacgcctcgcagctgtccagcttcgccaagcaggcgctgtcgcaggcg
cagaagtccatcgacagggtgctggacatccaggccgaggagaccccctggcccgacgcc
gtcatccccgactacggtgacggaacaaattctctcacaagtggaggatgggacacatct
tcctggggcttgagctcaaacacagaaccccagaatcagccagtgtcacccacagccatc
acgaagccggtgaggaggacggtagtggatgaatctgagaacttcttcagtgcctttctc
tccccaacagacgttcagagtatacagaaaaacccagtggtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagtctcagcactccaatcag
ctggaaggggcagtgacaacagaggcagaagtgaaggattcctccatagctgccctggac
ttgaaaagccttgatattcccaaggagaaatcagaagagaatgctgtgcttaaatctgat
gcccagcctgaagcaagctcaaacgaagttcctgacaaaaaggtgtctgctctaaatttt
gaagaacctgaagattctcctactgaaaaatccagtgtaggaggggatggagcagcaggt
gcccctgagggcacttctcagccccttggagcagggacgaaggacctggctttggaaggg
aaggagagaaagactgaggacaggcaaagcaataccccatcacctcccatcagcaccttc
tcctcaggcacttccaccacaagtgatattgaagttctggaccacgaaagtgtcataagt
gagagctcagtaagctccagacaagaagctgcagattcaaaatccagccttcacctcatg
cagacgtcgttccagctcctatccacgtctgcctgtgcggattataatcgcttagatgac
ttccagaaaatgaccgagagctgcagctcctcggatgcctttgaaagaatcgattcattc
agtgtgcagtccttggatagcaggagtgtcagtgaaataaattcagatgatgagttatca
ggcagggcttctgcctcagcgtctgtcgctgtcagtccttccgtgccaaagacggaaacg
gttgacaccctgaaaaacaaatctgaaaacttgactgatgctcctgtgttacatgctgag
gaagctgagatggaagagagtgggagaagtgcgacccctgttaattctgagcagccagat
gttgttttggttgctgctgtgcaaactgttgaagaacaggttgtgaaggaggaggccgag
ccccagcaggatgctggggaacagttggtagaggaggacactgaaaaacaagagcttaaa
aagatgattgcttcattaactgagaagctggagaagagagaaatacagttattaagtact
agtaaagaaagggctcgcttggaagaagcttatgataacctcaaagatgaaatgttcaga
atgaaagaagagagcagcagcctttcatctcttaaagaggagtttgctcagcgaattgca
gatgctgagaagaagctccaactagcctgcaaagaaagagatgcagctaaaaaggaagta
aagactgttaaagaggaattggctactagacttaataccaatgaaactgctgaattattg
aaagaaaaagaagagcaaatcaaaggattaatggaggaaggagaaaagctttccaaacag
cagctgcacaattccaacattattaagaaattaagagccaaagagaaagagagagaaaat
gttaacacaaaacagagcaaaaagattaaggaattggaagaggagttgcagcatttaaaa
caggtgcttgatggcaaggaagaccttgagaagcagcatcgagacagcattaaacagctg
aacagtgttgtggagagacaagaaaaggaccttgctaaacttcaggcagaagtggaggaa
cttgaagaaaggaacaggagtgtgcaggcagcactcgacagtgcgtacaaggaacttgca
gatcttcataaagctaatgctacaaaggacagtgaggctcaggaagcagccctgagtcgg
gaaatgaaggcaaaggaagagcttgggttagcactggaaaaggcccaggaggaggctcgg
cagcaacaggaggctttggcaattcaggtggcagacctgaggctggcactgcaacgtgca
gagcagcaggcagcaagaaaagaagattatttacggcaggaaattggtgaactacaacag
agactccaagaagcagagagcaggaaccaagagctgagccaaagcgtcacctctgctacc
cggccccttctgcggcagatagagaacctgcaggccacgctgggagcacagacctctgca
tgggagaaactggaaaagaacctttctgacaggctgggtgagtctcaaactcttctagca
gcagctgctgagagagaacgggctgctacagaagaacttcttgctaataaaattcagatg
tcttcttctgaatctcaaaatagtcttttaaggcaagaaaatacccgtcttcaagctcag
ctggaagtggagagaaacaaactgaagaaaatggaaaatgaaaacagcaggtatgaggtt
gaactagaagggctcaaagatgagtatgcaaaaaccttggaagatgcaaagaaagaaaag
gcactgctggctactcagttagaaatggagaagatgaaggttgaacaggagagaaagaag
gctattctcgtgcaagaagcagcaaaggagaaggaccgaaagtcatttacagttgagact
gtatcaagtacgccctcaatgtcccgctccagttccataagtggggtggacatggcagga
cttcagacctctttcctctcacaggatgatcctcatgatcactcatttggaccaatagct
accagtgggagcaatctctatgatgcaataaggatgggatcaggttcaagtataattgaa
aaccttcagtcacagctaaaattaagagaaggagagatttcacatctacagctggaaatt
ggaaacctggagaaaactcgatcaataatggcagaagagctggttaaattaacaaatcaa
aatgatgaacttgaagaaaaagtgaaggaaatacccaaattacgcactcagttaaaggat
ttggatcagaggtacaacaccattctccagatgtatggggagaaggcagaggaggctgag
gagctccgactggatctggaagatgtgaaaaacatgtacaagactcagatagatgaactt
ttaaaacagagacaaaattaa

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