Hirundo rustica (Barn swallow): 120758085
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Entry
120758085 CDS
T09369
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120758085 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120758085 (XPC)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120758085 (XPC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
120758085
NCBI-ProteinID:
XP_039931841
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Position
12:complement(10910032..10919698)
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AA seq
956 aa
AA seq
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MARKRGASPRPAAAKKRRSGRLRKEEKEEEEGEEEKKPSIKKPSKAPARKKEEDCDTEVS
NSAKTSKPSKRGEGKSQIRENKKNARNKENCIKEETCSDSLKHPQKEMKLKTESPVKKEM
DEDNTDKGDDDDDESEDEWEDVEELQEPATDKLEEAAVLPSVGLPSNPVEIEIETPEQVK
KRERRERRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRVCCQPDLLAIGL
SIVPTRFTQVPAGQVGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQSALEKRFAIYAAQD
DEELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKGKSSSKRLSHSSTSEGQESSAATP
KAVAKKCPCKTAKQDEKSSESKENNKEPKKPKTAQTKGTHKSKPTKGSQEQKESSNETGS
AEKDGPVRPKNNRRRRVASKVCYKEESGSDEGSASDFEVSEEESDLSDEDFETVPKRRRR
SQASQNSRLTALKRSKTETSENRLSFGAETKPAESTAPALPQAQRKRNKIISSDEDDGQQ
GVRKAMGTDQWLEVFLETEDKWVCVDCVHGNVGQPQLCFAHATKPLFYVVGFDNDGSVRD
VTQRYDPAWMTSTRKSRVDPEWWEETLQPYESPYVERNKKEENEFQVKLQDQPLPTAIGE
YKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCIHTLHSRDTWLKQARVVRIG
EVPYKMVRGFSNRARKARRAEPANQDLQDLALFGRWQTEEYQPPIAVDGKVPRNEYGNVY
LFLPSMLPVGCVQLKLPNLNRVARKLNIDCAQAITGFDFHAGYSHPVTDGYVVCEEYKEV
LVAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEPSAPETEKGG
GFSSDEEEAPSSESAVENTAIYWPQNRQLEKQEKTPKKSKREKRGEAAQLFPFEKL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaagcgcggagcatcgccccggcccgcggccgccaaaaagaggcgctctggg
cggctgcgaaaggaggagaaggaggaggaagaaggtgaggaggagaaaaagcccagtata
aaaaaaccatcaaaagctccagctaggaaaaaggaggaagattgtgatactgaagtttcc
aactcagcaaaaacttccaaaccttcaaaacggggagagggaaaatcacaaataagagaa
aataaaaagaatgctagaaataaagagaattgtatcaaagaggaaacatgcagtgactca
ctgaagcatcctcagaaagagatgaagttaaagacagaatctcctgttaaaaaagagatg
gatgaagacaatactgacaagggtgatgatgatgatgatgaaagtgaagatgaatgggag
gatgtggaagaacttcaggaacctgctacagataagttagaagaagctgctgttcttcca
tcagtggggctgccaagcaatcctgttgagatagagattgaaaccccagagcaggtgaag
aaaagagagaggagagaaagaagaaaagcggagtttgagatgtaccttcggagaatgatg
aaacgtttcagcaaggaagttcgtgaggacacacataaggttcacttgctgtgtttatta
gcaaatggtttctataggaacagggtctgctgccagccagatctcctcgccatcggtctg
tccatcgtccccacacgcttcacccaagtgcccgcaggccaagtgggccttgtctacctt
tccaacttggtgaaatggtttgtcggaaccttcactgtcaatgatgagctttccactgaa
aaaggagagccccttcagtcagcactggagaagaggtttgccatctacgctgcacaggat
gatgaggagcttgttcatatatttttaattattctgcgagcattacagctgctgtgtcgc
ctcgtgctgtcgtttcagcccattcccctcaaggagacaagaccgaagggaaagagctca
tccaagaggctgtctcacagcagcacttctgaggggcaggagagttctgccgcaacaccc
aaagctgtggcaaaaaaatgcccctgcaaaacagccaagcaggatgagaaatcctcagag
agcaaagaaaacaacaaggagccgaagaaacccaaaactgcccagaccaaagggacacac
aagtcaaagccgactaaaggcagccaggaacagaaggaatcaagtaatgagaccggttca
gcagaaaaagatgggccagtcaggcccaagaataaccgccgaagacgagtggcctccaaa
gtgtgttacaaggaagagagtggaagtgatgagggtagtgcttcagactttgaggtttca
gaggaggagagtgatctctcagatgaggattttgaaactgtacctaaaagacggaggagg
tcacaggcctcccagaattcaaggctgacagctttaaaaaggtcaaaaactgagacttca
gaaaacaggctttcatttggagctgagactaagccagcagaaagtacagctccagcctta
cctcaagcacagaggaagagaaacaaaataatttctagtgatgaggatgatggacagcag
ggggtgaggaaagcaatgggcacagaccagtggctggaggttttccttgagactgaggac
aagtgggtttgtgtagactgtgttcatggcaatgtaggccagccccagctgtgctttgca
catgccacaaagccacttttctatgttgtgggatttgacaatgatgggagtgtcagggat
gtgacacaaagatatgatccagcgtggatgacctcaacaaggaagagccgtgtggacccg
gagtggtgggaagagacactgcagccgtatgaaagtccctatgtggagagaaacaagaag
gaagaaaatgagtttcaagtgaagcttcaagaccagcctctaccaacagcaattggagag
tacaaaaaccacccactctatgcactgaagaggcacctcttgaaataccaggccatctat
cctgagtcagccgctatcttggggtactgcaggggagaggctgtctactccagagactgc
atacacacgctgcactccagggacacttggctgaagcaagctcgagtggtgaggattgga
gaagtgccttacaagatggtaagaggattttccaaccgggcgaggaaggcacgccgggca
gagccggcgaaccaggacctgcaggacctggcgctgtttggccgctggcagacagaggag
tatcagcctcccatcgcagtggatggaaaggttcctcggaatgaatatggaaatgtctat
ctcttcttgccatccatgttacctgttggctgcgtgcagctgaaacttccaaacctgaac
agagtggcacggaagctgaacattgactgtgctcaagccatcactggatttgattttcat
gcaggctactcacaccccgtcactgatgggtatgtggtgtgtgaggagtataaagaagtc
cttgttgctgcctgggagaacgaacaagcagaaatcgaaaagaaggagaaggagaagcgt
gagaagagagctctagggaattggaagctgttgacaaaaggacttctcattagagaaaga
ctaaagcaacgctactccatcaagactgagccatcagcacctgagacagagaaaggaggg
ggattctcttctgatgaagaagaagctccaagctcagagagcgcagtggagaacacagcc
atttattggccccaaaatcgccagctggagaaacaagagaaaacacccaaaaagagcaag
cgagaaaagagaggagaagcagctcagctgtttccttttgagaaattgtga
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