Hirundo rustica (Barn swallow): 120758180
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Entry
120758180 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120758180
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120758180
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
120758180
NCBI-ProteinID:
XP_039932072
LinkDB
All DBs
Position
12:11798343..11808524
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AA seq
1782 aa
AA seq
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MRSPAKRSPAVLLLLPLLAGLGVALAPDSPQGCARGSCYPATGDLLVGRAARLSATSTCG
LRRPQPYCIVSHLQEEKKCFICDSRRPYDARSNTNSHRIENVVTSFAPRPKKAWWQSENG
VEHVSIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGHTWKVYRYFAYDCAASFPHV
PHGAPRRIDDVVCESRYSDIEPSTEGEVIYRVLDPAIPIRDPYSPAIQNLLRVTNLRVNL
TKLHTLGDNLLDSRREIREKYYYALYELVMRGNCFCYGHASECAPLSGAPATTDGMVHGR
CVCKHHTQGLNCERCEDFYQDLPWRPAEGSSTNACRRCDCNEHSWRCHFDMAVFLATGNV
SGAVCDGCQHNTMGRRCHLCKPFYYKDPTKDLRDPTVCRACDCDPEGSLDGGLCDSADDP
ARGLIAGQCRCKEHVAGPRCDRCKPGFFGLSTDNPQGCQRCQCDPRGTVVDGSRCDPVTG
ECFCKRLVTGRSCNQCLPEHWGLSHDLPGCRPCDCDVGGARNNLCAMGTGQCQCRSHVVG
RQCEHVETGFYRINLDHYTYEAEDARLHQGSVVEREPPPDRPASWTGTGFARMLEGGWVE
FHVSDVPFSTEYDVVIRYEPQHPEAWQEVVLKVLRPXPVSASSPCGNTIPADDQLSTSLS
SGARYVVLSQPICLEQGISYTLRLELGCAAAHQDPTASVLIDSLVLLPRYSSLEMFIAGD
PSSMERRETFERYHCAQPFHAAGPSPVAEPCSRLLHSLSAILHDGALPCLCDPQGSLSAE
CQPQGGQCQCKPNVVGRRCHRCSPGTFGFGPGGCRPCQCSREGSVSTICDSTSGQCPCRE
GTHGPRCDRCQPGHWGFPVCRPCQCNGHAENCDPRTGRCLRCRDHTDGERCQRCAAGHFG
NPALGLGQHCRPCPCPEGPSTPRHFAASCYQDSRSQQVICHCSPGYTGSRCDECAPGYYG
DPLQGGRCLPCQCHDNIDVTDPEACDRRTGECLRCLYNTAGPHCAECQPGFYGDATRHSC
RRCSCNPLGTDASTCGPQQCHCDRHSGQCHCLPHVEGQSCDRCSPNFWNLASGKGCQPCA
CHPQHSLTPTCNQFTGQCSCRPGFGGQTCTDCQEHHWGDPQQQCRACDCDPRGIASAQCH
RSSGHCDCQPGISGVRCDQCARGFAGTFPACQPCHPCFGDWDRVVQDLAARTRALAQRAS
LLQHTGAAGAFEGTFRQLEENLATVRDVVATRNTTAATAAHLTHTMEGLRQQIEEATERL
TRVEGELTAAQDANFNASHVLNTVDRGARALNHSLQDLEQRLHTLKTSNFLGAYDSIRQS
YEESQEAERQADASTRAVPSPVSISAATRHRTEQLLASQRDAFNRHNAASRRALMDLAAR
AQALSLHPLNEKVCGVAGDVPCAESPCGGAGCRDEDGGRRCGGLSCGGAVSKADSALDRA
RHAQEELRQTDSDMAQLSRKVAEVKGKAEEARLRAQAALDKANQTRARVDSSNKELRELI
SHVKAFLSQEGADPESIEVVAGRVLELSLPAAPDQIHRLAEEIKKRVRSLASVDAILEQT
ASDVHQAGQLLQDAQRARSRAEGVRGTAEAVRQALEEARQAQGMAEQALQQAAGDIQHSE
RALSTMQTQTGSAEQQLAGAMEQIGVLDRQTDALKVKRANNSLAATRAQEAASTARERAG
EAKQVLEGSLRDQYRTAQELVEHRAQGAQQAGRRAQQLREEAAGLLQDAQGKLQRLRALE
EEYERNERVLDAKAAQLGGLEARMREVLATINQQVQIYNTCQ
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcccggcgaagcggagccccgccgtcctgctgctgctgccgctgctggccggg
ctgggggtggccctggcccccgattccccccagggctgtgcccgcggcagctgctaccca
gccaccggggacttgctggtggggcgagcggcccgcctgagtgccacctccacctgcggg
ctgcgccggccccagccctactgcatcgtcagccacctccaggaagagaaaaagtgcttc
atctgcgactcgcggcggccctacgatgcccgcagcaacaccaacagccaccgcatcgag
aatgtagtcaccagctttgccccccgccccaagaaagcctggtggcagtcggagaatggt
gtggagcacgtcagcatccagctggacctggaagccgagttccacttcacccatctcatc
atgaccttcaagaccttccgccccgcggccatgctggtggagcgctcagctgactttggg
cacacctggaaagtgtatcgctactttgcctatgactgcgctgcctcttttccccacgtc
ccccatggggccccacgccgcattgatgatgttgtctgcgagtcccgctactccgacatc
gagccctccactgagggggaggtcatctaccgggtgctggaccctgccatccccatccgg
gacccctacagccctgccatccagaacctgttgcgtgtcaccaaccttcgtgtgaacctc
accaagctgcacacgctgggggacaacctgctggactcacgacgggagatccgggagaag
tactactatgcgctctacgagctggtgatgcgtgggaactgcttctgctacgggcacgct
tctgagtgcgccccactcagcggggctcccgccaccaccgacggcatggtgcacgggcgc
tgtgtttgcaaacaccacacgcaggggctgaactgtgagcgctgcgaggacttctaccaa
gatctgccctggcgcccggccgagggctccagcaccaacgcctgtcgccgctgtgactgc
aatgagcactcatggcggtgccactttgatatggccgtgttcctggccacggggaacgtc
agtggggctgtgtgtgatggctgccagcacaacaccatgggccgccgctgccacctctgc
aagcccttctactacaaggaccccaccaaggacctgcgggaccccacggtgtgccgagcc
tgcgactgtgaccctgagggttctctggatggtgggctgtgcgacagcgcagatgaccca
gccaggggcctcattgcggggcagtgccgctgcaaagagcacgtggctggtcctcgctgc
gatcgctgcaaacctggcttcttcggcctcagcaccgacaacccgcaaggctgccagagg
tgccagtgtgacccccgtggcacagtggttgatggcagccggtgtgaccctgtcactggg
gagtgcttctgcaagcggctggtgaccgggcgcagctgcaaccagtgtctgcccgagcac
tggggactgagccatgacctcccgggctgccggccctgtgactgcgatgtgggaggtgct
cgcaacaacctgtgtgccatggggacagggcagtgccagtgccgcagccatgtggtagga
cgacagtgtgaacacgtggagaccggtttctaccgtatcaacctggatcattacacctat
gaagcggaggatgcacggctgcatcagggctcagtggtggagcgtgagccccccccagat
cgtccagcttcctggacagggacaggctttgcccgcatgttggaaggtggctgggtggag
tttcacgtgagtgacgtgcctttctccactgagtatgatgtggtcatccgctatgagccc
cagcacccagaggcctggcaggaggtggtgctgaaggtgctgcgccccnagcccgtctcc
gccagcagcccttgtggaaacaccatccctgctgacgaccagctctccaccagcctctcc
tctggtgccaggtatgtggtgctgtcccagcccatctgtctggagcagggtatctcctac
acgctccgcctggaactgggctgtgctgctgctcatcaggatcccactgccagtgtgctc
atcgattcgctggtgctcctgccccgttactcctcactggagatgttcattgcgggtgac
cccagctccatggaacgccgggagacctttgagcggtaccactgtgcccagcccttccac
gctgcagggccctcacccgtggccgagccttgctcccgcctcctgcacagcctctcggcc
atcctgcatgatggggcactgccctgcctctgcgacccccagggctcgctcagtgctgag
tgccagccccagggcgggcagtgccagtgcaaacccaatgtcgtgggacggcgctgtcac
cgctgttctccgggaacctttggctttgggcccggcgggtgccgaccgtgccagtgcagc
cgtgagggttcagtgagcaccatctgcgacagcacctcagggcagtgcccctgccgtgag
ggcacccatggcccacgttgtgaccgctgccagcccggccactggggcttccctgtctgc
cggccctgccagtgcaatgggcatgccgagaactgtgaccctcggacaggcagatgcctg
cgctgccgggaccacacggatggtgaaaggtgccagaggtgtgcggccggacactttggg
aacccagcgcttggcttggggcagcactgccggccctgcccctgtcctgaggggcccagc
accccccgccacttcgctgcctcctgctaccaagacagccgctcccaacaggtcatctgc
cactgcagccctgggtacacaggttcccgctgtgacgagtgtgcccctggctactatggg
gaccctctgcagggtgggcgctgcctgccctgccagtgccatgataacatcgatgtgacg
gacccagaggcgtgtgaccggcgcacaggggagtgcctgcgctgcctctacaacacagca
gggccccactgtgccgagtgccagcccggcttctatggagatgccacacgacacagctgt
aggcgttgctcctgcaaccccctgggcactgatgccagcacctgtgggccccagcagtgc
cactgtgacaggcacagcgggcagtgccactgcctgccccatgtggagggtcagagctgt
gaccgctgcagccccaacttctggaacctggccagtgggaaaggctgccagccttgcgcc
tgccacccccagcactccctgacacccacctgcaaccagttcacagggcagtgctcctgc
cggccaggctttgggggccagacttgcaccgactgccaggagcaccactggggtgacccg
cagcagcagtgccgagcctgtgactgtgacccccgtggcattgccagtgcccagtgccac
cgcagcagtggccactgcgactgccagcctggcatctcaggagtccgctgtgaccagtgt
gcccggggctttgccggtaccttccctgcctgccagccctgccacccctgcttcggggac
tgggaccgtgtggtgcaggatctggccgcccgtacccgagcgctggcacagcgggccagc
ctcctgcagcacactggggctgctggcgccttcgagggcaccttccggcagctggaggag
aacctggccaccgtacgtgatgtggtggccacccgcaacaccactgctgctaccgctgcc
cacctgacacacaccatggaggggctgcggcagcagatcgaggaggcaactgagaggctg
acacgggtggaaggggagctgacggctgctcaggatgccaacttcaatgctagccatgtg
ctgaacactgtggaccggggcgcccgcgccctcaaccacagcctgcaggacttggaacag
cggctacacaccctcaagacctccaatttccttggtgcatatgacagtattcgccagtcc
tatgaggagtcacaggaggccgagcgccaggcggacgcctccacccgcgccgtgcccagc
cctgtcagcatctcagcagccactcgtcaccgcactgagcagctcctggccagccagcgg
gatgccttcaatcgccacaacgcggccagccggcgggcactgatggacctggcagcaagg
gcgcaggcactgagcctgcacccgctcaatgagaaggtctgcggtgtggcaggtgatgtg
ccctgtgccgagagcccttgtggcggtgctgggtgccgggatgaggatgggggacgacgc
tgtggtggtctgagctgtggtggagccgtgtcaaaggctgacagtgccctggaccgggca
cgccatgcccaggaggaactgcgtcagactgacagcgacatggcccagctctcccgcaag
gtggcagaggtcaaggggaaggcagaggaggcccggttgcgagcgcaggcagccctggac
aaggcgaaccagaccagggctcgtgtggacagctccaacaaggagctgagggagctaatc
agccatgtcaaggccttcctgagccaggagggggctgatcctgagagcattgaggtggta
gccggtcgggtactggagttgtcactccctgctgcaccggaccagatccaccgcctggcc
gaggagatcaagaagcgggtgcgcagcctggccagcgtggatgccatcctggagcagaca
gccagtgatgtgcatcaggctgggcagctgctgcaggatgcccagcgggccaggtcacga
gcggagggagtgcggggcacggccgaagcagtgcggcaggcactggaggaggcgcggcaa
gcccagggcatggccgagcaggcactgcagcaagctgccggtgacatccagcacagcgag
agagcccttagcacgatgcagacgcagacaggaagtgcagagcagcagctggcaggtgcc
atggagcagattggggtcctggacaggcagactgatgccctgaaggtgaaacgtgccaac
aacagcctggcagccacgcgtgcccaggaggcagccagcactgcccgggagcgggccggc
gaggccaagcaggtgctggagggctctcttcgggaccagtaccgaacagcacaggagctg
gtggagcatcgggcgcagggcgcgcagcaggcaggcaggcgggcacagcagttgcgggag
gaggccgcgggactgctgcaggacgcccagggcaagctgcagcggctgcgagcactggag
gaggagtacgagcggaacgagcgcgtcctggatgccaaagcagcccagctgggcgggctg
gaggccagaatgagggaggtgctggccaccatcaaccagcaggtccagatctacaacact
tgccagtga
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