Hirundo rustica (Barn swallow): 120758310
Help
Entry
120758310 CDS
T09369
Symbol
CACNA2D3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04260
Cardiac muscle contraction
hrt04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120758310 (CACNA2D3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120758310 (CACNA2D3)
04261 Adrenergic signaling in cardiomyocytes
120758310 (CACNA2D3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120758310 (CACNA2D3)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120758310 (CACNA2D3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120758310
NCBI-ProteinID:
XP_058278225
LinkDB
All DBs
Position
12:complement(2633107..3029948)
Genome browser
AA seq
1090 aa
AA seq
DB search
MPENLNLLRAFGGFFFLFWSAFNTALVDVVGSEQQIPLSVVKLWASAFGGEIKSIAAKYS
GSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEDAYLKHE
FDADLQYEYFNAVLINERDEEGNYLELGKEFILVPNDHFNNLPVNISLSDVQVPTNMYNK
DPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKWEPDENGVIAFDC
RNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEEL
HYVEPCLNGTLVQADRANKEHFREHLDKLFAKGIGMLDIALNEAFNMLNEFNHTGQGSIC
SQAIMLITDGAVDTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLKWMACANKGFFTQI
STLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLADDQGLVLMTTVAM
PVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRP
LYEEGKKRRKPNYSSVDLSEVEWEDRDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMT
NDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVSLADEWSYCNTDLH
PEHRQMTQLEAIKRYLTGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSDK
GVEVAFLGTRTGLSRINLFVGPEQLTNQDFLTAEDKENIFNADHFPLWYRRAAEQIPGSF
VYSIPFSTETANKSNVVTASTAIQLLDDRKSPVVAAVGIQMKLEFFQRKFWTASRQCASL
DGRCAISCDDETINCYLIDNNGFILVSEDYQQTGYFFGEVEGAVMNKLLTMGSFKRITLY
DYQAMCRTNKESSDSAHSLLDPYNAFFAAVKWIMTELVLFLVEFNLCSWWHSDLTAKAQR
LKQTLEPCDTEYPAFVSERTIKETTGNIACDDCFKSFVIQQIPSSNLFMVVVDNECFCDS
IPPITMAPIEIRYNESLKCERLKSQKIRRRPESCHGFHPEENARECGGVSGLSAKPSLVL
LALLLTIFSR
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgccagagaacctgaatcttcttcgggcttttgggggttttttctttctcttctggtca
gcttttaacacagccttagtggatgtggttggatcggagcagcagatccccttgtcggtt
gtaaagctctgggcctcagcatttggtggagagatcaaatctattgcagccaaatactca
ggttcccagctcctacagaagaaatacaaagaatacgagaaggatgttgcaatagaagaa
attgatggccttcagcttgtgaaaaagttagcaaaaaatatggaagaaatgtttcataag
aagtctgaagccgtacggcgtcttgttgaagctgcagaagatgcttatctgaaacacgaa
tttgatgctgacttacagtatgaatacttcaacgctgtgctcataaatgaacgagatgaa
gaaggaaactatctggagctggggaaggagttcattctggtgccaaacgaccacttcaac
aacttgcccgtgaacatcagtctgagtgatgtccaagtacccaccaatatgtacaataag
gatccagccattgtaaatggagtttattggtcagaatctttaaataaggtgttcgttgat
aactttgatcgtgacccttctctcatctggcagtactttggaagtgcaaaaggatttttc
aggcaatatccaggaattaaatgggaacccgatgagaatggagtcattgcatttgactgc
agaaacagaaagtggtacatccaggcagcaacttctccaaaagatgtggtaattttagtg
gatgtcagtggcagtatgaaaggactgcgtttgactattgcaaaacagacagtttcatct
attttggatacccttggagatgatgacttcttcaatataattgcttataatgaagaactc
cactatgtcgagccgtgtctgaatggaacattagttcaagcagacagagccaacaaagag
catttcagggaacacctcgacaaactttttgcaaaaggaattggaatgctggacatagct
ttaaatgaagctttcaacatgctcaatgaattcaatcacacaggacaaggaagcatttgc
agccaagccataatgttgatcaccgatggagctgtggacacgtatgatacaatatttgca
aaatacaattggccagacagaaaagtccgtatttttacctatctgattggaagagaagct
gcatttgctgataatctgaagtggatggcctgtgctaacaaaggtttttttactcagatc
tccaccttggctgatgtgcaggagaacgttatggaatatctccatgttctcagccgacca
aaggttattgaccaggagcacgatgtagtgtggacggaagcatacattgacagcactctc
cctcaggcacaaaagcttgctgatgatcagggattggtgttgatgacaacagttgccatg
ccggtatttagtaagcaaaatgagactaggtctaaaggaatcctcctgggagtagttggc
acagatgttccagttaaagagcttttaaaaactattccaaaatacaagttaggtattcat
ggatatgcttttgcaattacaaacaatggatatattttgactcacccagaacttaggcct
ttgtatgaagagggaaagaaacgaagaaagcccaactacagtagtgtggacctttctgag
gtggagtgggaagacagagatgatgtgcttcgaaatgcaatggtgaaccggaaaacagga
aaattctccatggaagtgaagaagacagtggacaaagggaagcgggtcctggtgatgaca
aatgactactattatacagatatcaagggtactccattcagtttaggtgtggctctctct
agaggacatggaaaatacttcttcagagggaacgtaactgtagaagaaggtttacatgat
ttagagcaccctgatgtatctttagcagacgaatggtcctactgcaacactgacttacac
cctgaacaccggcagatgacccagttagaagcaattaaacgctacctcacaggaaaagag
cccctgctccaatgtgataaagaattgatccaggaagttttgtttgatgcagttgtgagt
gcacccattgaagcttattggaccagtctagcactgaataaatcagaaaactctgacaag
ggagtggaagttgctttccttgggacacggactggactctctcgtatcaacctgtttgtg
ggcccagaacagctgaccaaccaagacttcctgacagctgaagataaggagaacattttt
aatgctgaccattttccactctggtacagaagagctgctgaacaaatacctgggagcttt
gtctactcaatccctttcagcacagaaaccgccaacaagagcaatgtggtgacagccagt
actgctattcagcttctggatgacaggaaatctccagtggttgcagctgtaggtatccag
atgaagcttgaatttttccagcggaaattttggactgcgagcagacagtgtgcatccctc
gacggcagatgtgctataagctgtgatgatgaaacaatcaactgttacctaatagataac
aatggatttattttagtgtctgaagactatcagcagactggttacttttttggggaggtt
gaaggcgctgtgatgaacaagttactaacaatgggctcttttaagagaattacactttat
gactaccaggccatgtgtaggacaaacaaagagagcagtgacagtgcccatagcttactg
gacccttataatgccttctttgctgcagtaaagtggattatgactgaacttgtcttgttc
cttgtggaatttaatctatgcagttggtggcactctgatctaacagctaaagcgcagagg
ttgaaacaaaccctagagccctgtgatactgaatatccagcctttgtttccgagcgcact
ataaaggagaccacggggaatattgcttgcgatgactgtttcaagtcttttgttatccag
cagatcccaagtagcaacctcttcatggtggtagtagataatgagtgcttctgtgattct
atcccaccgattaccatggcacctatagaaataaggtataatgaatcccttaaatgtgaa
cggttaaaatctcagaagataagaagacgcccagaatcttgtcatggatttcaccctgaa
gaaaatgcaagagaatgtggtggtgtctcaggccttagtgctaaaccttctcttgttctt
cttgctctgctattgacgattttctccaggtga
DBGET
integrated database retrieval system
