Hirundo rustica (Barn swallow): 120758313
Help
Entry
120758313 CDS
T09369
Symbol
EDEM1
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120758313 (EDEM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hrt04091
]
120758313 (EDEM1)
Lectins [BR:
hrt04091
]
M-type lectins
120758313 (EDEM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_47
HvfC_N
Motif
Other DBs
NCBI-GeneID:
120758313
NCBI-ProteinID:
XP_039932345
LinkDB
All DBs
Position
12:19713496..19726563
Genome browser
AA seq
608 aa
AA seq
DB search
MRWRSVVLGLLLLRLGLQALLALLPALARGLCLHPRLPCPGPRPPALPGPPAGAAGRGAR
LWGAAAGGDEYERRYSGAFPPQLRARLRDAARGMFVFGYDSYMEHAFPRDELDPLHCRGR
GPDRRDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVSFDKDSTVQV
FEATIRVLGSLLSAHIIITDTKQPFGDMTIKDYDNELLHLAHDLAVRLLPAFENTKTGIP
YPRVNLKKGVPPDSHNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWSLRSNN
TGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFNAAYQNIQSHL
RRGREACNEGEGDPPLYVNVNMYTGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYY
AIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEK
YTKAKCGYATLHHVVEKTKEDRMESFFLSETCKYLYLLFDEENPVHKSGNKFMFTTEGHI
VSVDERFRNSLWEDILPGEEDSAHKTKPAELKAANFSSNCNRVPDERRYLLPLKSNYMRQ
IDRMVGLI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggcggtcggtggtgctggggctgctgctgctgcggctcgggctgcaggcgctg
ctggcgctgctgcccgcgctggcccgcgggctgtgcctgcacccgcgcctgccctgcccc
ggcccgcggccgcccgcgctgcccggcccgcccgcgggcgctgcggggcgcggggcccgg
ctgtggggcgcggcggcgggcggcgatgagtacgagcggcgctacagcggcgccttcccc
ccgcagctgcgggcgcggctgcgggacgcggcccggggcatgttcgtgttcggctacgac
agctacatggagcacgccttcccccgcgacgagctcgacccgctgcactgccgaggccgc
gggcccgaccgccgcgacccctccaatctgaacatcaatgatgtgctggggaactactcc
ctgacactgatcgacgcgctggacacgctggcggtaatgggaaactcctcagaattccag
aaggcagtgaagttggtgattgacacggtttcatttgacaaagactccacagtccaagtg
ttcgaggcgacaatcagggttttgggaagcctgctgtctgcccacatcataattacagac
accaagcagccctttggcgacatgaccattaaggattatgacaacgagctgctgcacttg
gctcatgacctggcagtgaggctgctcccagcctttgagaacaccaaaactggcattccc
taccctcgggtgaacctgaagaagggggttcctccagacagccacaatgagacctgcacg
gcaggagctggatccttgctggtggagtttgggatcctcagcaggctgcttggtgattcc
accttcgagtgggtggccaggagagctgtgaaggcactgtggagcctcaggagcaataac
actggactgctgggaaatgttgtgaacatccagactggtcactgggtcgggaagcagagt
ggactgggagcagggtcagattcgttctatgagtacctgctgaagtcctacatcctcttt
ggggaaaaggaggacctggagatgttcaacgctgcttaccagaacattcagagccacctg
aggagaggtcgggaggcctgcaatgaaggagaaggtgaccctcccctgtacgtcaacgtg
aacatgtacacgggccagctgatgaacacctggattgactctctgcaggcctttttccct
ggactgcaggtgttgataggagatgtggaagatgccatttgtctccatgccttctattat
gccatatggaaacgctatggagctctcccagagaggtacaactggcagctgcaggcccca
gatgttcccttctacccgctgaggccggagctggtggagtccacgtatcttctttatcag
gccacaaagaacccgttttaccttcatgtgggaatggatattctgcagagtttggaaaaa
tatacaaaagcaaagtgtggctatgccacgttgcaccatgtggtggagaagaccaaggag
gatcggatggagagctttttcctcagtgaaacctgtaaatacttgtacctgttgttcgat
gaagagaatccagtgcataaatctgggaacaagttcatgtttactactgagggccacatc
gtgtctgtggacgagcgtttccggaactcgctgtgggaggacatcctccctggagaggag
gacagcgcccacaaaaccaaacccgccgagctcaaggcagccaacttcagctccaactgc
aacagagtccctgatgagaggaggtacctgctgcccctgaagagcaactacatgaggcag
atcgacagaatggtgggactgatctga
DBGET
integrated database retrieval system
