Hirundo rustica (Barn swallow): 120758349
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Entry
120758349 CDS
T09369
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrt03009
]
120758349 (RRP9)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
Other 90S particles
120758349 (RRP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WDR54
Beta-prop_RIG_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_LRRK2
WD40_like
Troponin
Motif
Other DBs
NCBI-GeneID:
120758349
NCBI-ProteinID:
XP_039932451
LinkDB
All DBs
Position
12:complement(3706185..3710948)
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AA seq
515 aa
AA seq
DB search
MGLTEGTTKKMMKQDVQESSFTCMTMDEAKEGLSRRDRRRGAFAAPVPIPVPSRRSPRFV
PQAPGAAGRPRATAARPADEEVSSDSETESPLLGRRRREAAEEEVEETPQEKKLRLAKQY
LEELRQLEEERAEEEEELEPPDLIGDRLKEDVLEQKGRLQRLVAKDVQPPDPARIRVLRG
HQLPVTCLVISPDDKFIFSASKDGSLIKWEVDSGKRLCVVPGGKKGTEERHMGHASQVLC
MAISSDGKYLATGDKNKLIMIWDAATCKRLHIFTGHRDAVSALSFRKGTHQLYSASHDRC
VKVWDVGENAYVETLFGHQDIITGLDSLSRECCVTAGGRDGTVRLWKIPEESQLVFSGHQ
GSIDCIQLINEEHMVSGADDGSLALWGLTKRKPLVLARQAHGEQEAQGLQQPYWISAVAA
LRNTDLLATGSHSGSVKLWKCGEGFRKLEHLLDIPLVGFVNSLKFSAAGDFLVAGIGQEH
RLGRWWRIKEAKNSICIIPLKQKTTASSPESPGSS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggcttacagagggcaccacaaagaagatgatgaagcaggacgtgcaagaaagttct
ttcacctgtatgaccatggatgaggccaaggaagggctatctcgccgggatcgacgccgt
ggcgctttcgctgcgcccgtccctattcccgtcccgtcccgtcgatcgccccgttttgtt
ccgcaggcaccgggcgccgctgggagaccgcgggcgacggccgctcggcccgccgacgag
gaagtgtctagcgactccgagacagagagcccgttgttggggcggcggcggcgagaggca
gcggaggaggaggtggaggagacgccgcaggagaagaagctgcgcttggccaagcagtac
ctggaggagctccgccagctcgaggaggagcgggcggaggaggaggaggaactcgagccg
ccggatctcatcggcgaccggctgaaggaggacgtgttggagcagaaaggccggctgcag
cgcctggtcgccaaagatgtacagcctccagatccagccaggatccgtgtgctgcgggga
caccagctgcctgttacctgcctcgtcatctctcctgatgacaaattcattttttctgct
tccaaggacggctccctcatcaaatgggaggtggacagtgggaagaggctgtgcgtggtg
cccggggggaagaagggcacggaggagcggcacatggggcacgcatcccaagtcctttgc
atggccatttcatcggacggcaagtacctggctacgggagacaagaacaagctgatcatg
atctgggatgcagccacctgcaagcgcctgcacatcttcacagggcaccgcgacgccgtc
tcggccctgtccttccgaaagggcacacaccagctgtacagcgcttcccatgaccgctgt
gtcaaggtctgggatgtgggggagaatgcatacgtggagaccctgttcggacaccaggac
atcatcacagggctggacagcctgagccgggagtgctgtgtgacagcagggggacgggat
ggcaccgtgcggctctggaagatccctgaggaatcacagctcgtgttttcggggcaccag
ggctccatcgactgtatccagctcatcaacgaggagcacatggtgtctggtgctgatgat
gggtctttagccctgtgggggctgaccaagaggaagccgctggtgctggcccggcaggcg
cacggtgaacaggaggcccagggcctgcagcagccctactggatctcggcagtggctgcc
ctgcgcaacactgacctcctggccacagggtcccacagtggcagcgtgaagctctggaag
tgtggtgaaggatttcggaagctggagcacctcttggacatccccttggtgggttttgtc
aacagcctcaagttctcagcagctggtgatttcctggtggctggcattggacaggagcac
cggctcggacggtggtggagaatcaaagaagccaaaaacagcatctgcatcatccccctg
aagcagaagaccacagcctcgagccctgaatcccctggcagctcctag
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