Hirundo rustica (Barn swallow): 120758421
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Entry
120758421 CDS
T09369
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120758421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120758421
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Ferritin
Staph_opine_DH
BRE1
LXG
Motif
Other DBs
NCBI-GeneID:
120758421
NCBI-ProteinID:
XP_058278256
LinkDB
All DBs
Position
12:11783967..11798144
Genome browser
AA seq
1930 aa
AA seq
DB search
MLCLLSASLGTGRCCVTRGPLPACTFLCLTLAKARCGQVPPLAWHDCRRRRQAPAALLQE
QQLSPARAQPEPSGPPTPQPTRAASHLPGNRGSHGHRQIPWLPMDLLVLAFLLVGGLVAG
AWQEPDLSHGCARGSCYPATGNLLVGRATRLSATSTCGLDRPQEYCIVSHLQDSEKCFTC
DSRDPSLPESHRIENVIYLSSPHDQRTWWQSENGVEHVSIRLDLEGEFHFTHLIMKFKTF
RPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPDHPLGLVDEVLCDQRYSEIEPSSNG
EVIFKVLDPSIPVADPYSPAIQDLLRVTNLRVNLTKLHTLGDNLLDSRQEVLHKYYYAVD
ELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYQDLPWR
PAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYY
RHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRCDRCRH
GAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRSCSQCVPEFWGLSY
DLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTYEAEQA
TGHGHSHPQLPGAIRAEVPQDCLEYDTREPVGRKGRSRHQRSPPRAPQPPVPSRRSRQQP
PKLDVEEVVRDTAGSMVTWTGLGFARVRDGAGLTFRVDNVPYPMDYELLLRYEPESAEDW
EAVVSVSSRVLPTSSRCGNLLPSEQMYREILPHSQRYVLLSRPFCFEPSTPYEVTMRLQR
AGVTQRHPGAFILIDSLVLLPRVSELPGLHGAEAAERQEELERYQCLEVFRMAPPHPLAQ
ACARLVCSISALMHGGALPCQCDPQGSRSSECQVQGGQCECKPHVIGRRCDHCAPGSYGF
GPLGCSPCTCSPEGSVLQLCDKVSGQCRCQPGTVGRQCDQCQPGHWGFPACRPCQCNGHA
EECDPRTGTCLRCRDHTSGRHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRHYHGSTC
HADDETHHIICVCAPGYAGPRCDRCSPGYFGAPEMEGGECRPCQCNNNIDASDPEGCDPR
TGQCLRCLYHTAGPHCAQCQPGYYGNALQRSCRRCGCDPRGTLASHCTDGTCDCDRGTGA
CACRPNVVGKSCDRCAPHFWSLGGPRGCEPCGCHPTHALHLACDTVTGQCQCRPGFGGRV
CSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLGFGGLRCDRCQRGYQEPF
PHCLPCHPCFGRWDLAVGSLREGLQRLGAQVQALREGASTLPLSPRRLRELEEALGHVER
LLGERDSPGGPLLDGLPRQLGGTRMELDNFWKHLQELEQHLDQLAQADMQHHDRLAELSR
ELGGLNQTTSHLQTLLGTVATAGFSESYRSILASMEASRQAEVAANGTTGELSRAQMTRQ
AAERALRQRGDTFRRGTAAARKSLREAQKRVMGLNIARINEKICGAPGDQSCKHAPCGGA
LCRDSVGTRHCGGPGCAGALPISAQALSSAHNASQQLEVALEQLGVVAQKMQDVQELARG
ARSWAEEALERSQAARSRAEKATAQLRDFIRRIKAFLAEEGADPGSIELVARQVLNISLP
SSPGQIQELLREMRESISQLEGVDAVLNSTAEGLAVARDLLAQGQEARQRAEGIRDELAG
TQQALEVAQTQVMTAGSTLQSARDAIQVAEKRAKEAERRLQVLDRKESQAQRRLQELAQR
ITALQERGQDVRHTAQQAKDRAQSATTTSGTLSQDLAQVTQRYVMLKNRVGTLDRVSGGA
LQRVSQLIAEAQDLLDKASNSKRKLEDLEQRFGANEQTMAAKVTRLQALEQQVIGLLQEI
RERANAYATC
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccttctctcggccagcctaggcacaggacgctgctgtgtcacacgtgggcca
ctgccagcatgtaccttcctctgcctcaccttggctaaagctcggtgcgggcaggtccct
cccctcgcctggcacgactgccggaggaggagacaggcaccggccgccctcctccaggaa
cagcagctgagcccggcccgagcccagcccgagcccagcgggcctccgactccgcagccc
acccgggccgccagccacctgcccggcaaccgaggctcccacgggcacaggcagatcccg
tggttgcccatggacctcttggtgcttgctttcctcctggtggggggactggtggcaggg
gcttggcaggagcctgacctgagccacggctgtgcccgtggcagctgctacccagccact
gggaacctgctggtggggcgagccacccgcctgagtgccacctccacctgtgggctggac
aggccccaggaatactgcattgtcagccacctccaggactcggagaaatgtttcacctgt
gactcacgtgacccatccctgcctgagagccaccgcatcgagaatgtcatctacctgagc
agccctcatgaccaacggacctggtggcagtcggagaatggtgtggagcacgtcagcatc
cgcctggacctggagggcgagttccacttcacccacctcatcatgaagtttaaaaccttc
cgccccgcggccatgctggtggagcgctcagccgactttgggcgcacctggaaagtgtac
cgctactttgcctacaactgctccaagctcttccctggaatccctgaccaccccttgggg
ctcgtggatgaggtgctatgtgaccaacgctactctgagattgagccctccagcaatggg
gaggttatcttcaaggtgctggacccctccatccccgtagcagatccctacagcccagcc
atccaggacctgcttcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacgctg
ggggacaacctgctggactcacggcaggaggtgctgcacaagtactactacgctgtggat
gaactggtgctgcgcgggagctgcttctgccatggccacgctgcccactgtgcccccgca
ccgggtgccccgacaccctctgtccccggcatgatccacgggcgctgtgtctgcgagcac
cacacgcaggggctgaactgtgagcgctgcgaggacttctaccaagatctgccctggcgc
ccggccgagggctccagcaccaacgcctgccgccgctgtgactgcaacgagcactcacgg
cggtgccactttgatatggccgtgttcctggccacggggaacaccagtggggctgtgtgt
gatggctgccagcacaacaccatgggccgtcgctgtcacctctgcaagcccttctactac
cggcaccctcgctctgacatccggtcccccactgcctgtgccccgtgcgattgtgacccg
gcaggctcgctggatggaggtgcctgcgacgggcacacggacgtggcgctgggcatgatt
gcggggcagtgccgctgcaaggagaatgtggccggtccccgctgtgaccgctgccggcac
ggcgcctatggcctcagccatggcgacccacagggctgccagccatgcaggtgtgatcca
cggggtacggtggcgggcagctccccatgtgaccccatcagtggggactgctactgcaag
cgcttcgtggctgggcgctcctgcagccagtgtgtgcccgagttctggggtctgagctac
gacttggggggctgccggccctgcgcctgtgacttcgggggagcctacaacaaccggtgc
tccatggaggatggggcatgtccctgccgtccccacatcatggggcggcagtgtgaccag
gtacaacccggcttcttctgtgcccccctcgactactacacctatgaggccgagcaggcc
accggccacggccacagccaccctcagcttccgggtgccattcgggcagaggtgccccag
gactgcctggagtatgacaccagggagccagtggggcggaagggacgctcacggcatcag
cgcagccccccccgtgctccccagccccctgtcccctcgcgccgcagccgccagcagccc
cccaagctggacgtggaggaggtggtgagggacactgccgggagcatggtgacatggacg
ggcttggggttcgcccgggtgcgggacggggctggcctgaccttccgtgtggacaacgtg
ccctaccccatggactacgagctgctgctgcgctatgagcctgagtcagccgaggactgg
gaggccgtggtcagtgtcagctcccgggtgctgcccaccagctctcgctgtgggaacctg
ctgccctctgagcagatgtaccgtgagattctgccccacagccagagatatgtgctgctg
tcccggcccttctgcttcgagcccagcaccccttatgaggtgaccatgcggcttcagcgg
gctggtgtcacccagcgccaccctggtgccttcatcctcatcgactcgttggtgctcctg
ccgcgggtgtcagagttgcctgggttgcatggggcagaggcagcagagcgccaggaggag
ctggagcggtaccagtgcctggaggtgtttcgcatggccccccctcatcccctggcccag
gcctgtgcccgcttggtctgcagcatctcagccctgatgcacggcggggcactgccctgc
cagtgtgacccacagggctcccgcagcagcgagtgccaggtgcagggcgggcagtgcgag
tgcaaaccccacgtcatcggccgacgctgcgaccactgtgccccaggcagctacggcttt
gggcccctgggatgcagcccctgtacctgctccccagagggctcggtgttgcagctgtgc
gacaaggtgagcgggcagtgccggtgccagcccggcaccgtgggccggcagtgtgaccag
tgccagcccggccactggggcttccctgcctgccggccctgccagtgcaatgggcacgct
gaggagtgcgacccccggacgggcacctgcctgcgctgccgggaccacacgagcggacgg
cattgtgagaggtgccaggatggttactatgggaaccctgtgctgggctcagggcagcag
tgccggccctgcccctgccccggataccctggcacacggcattaccacgggagcacctgc
catgccgacgatgagacacaccacatcatctgcgtctgtgcccctggatatgcggggccc
cgctgtgaccgctgctcccctggttactttggggctccggagatggaggggggggagtgc
cggccgtgccagtgcaacaacaacattgacgccagcgacccagagggctgtgacccccgc
acgggacagtgcctgcgctgcctgtaccacactgctgggccacactgtgcccagtgtcag
cctggctactacggcaatgccctgcagcgcagctgccggcgctgtggctgtgacccacgg
ggtacactggcctcccactgcaccgacggcacctgcgattgcgaccgtggcacaggagcc
tgtgcctgccggcccaacgtcgtgggcaagagctgtgatcgctgtgcaccccacttctgg
agcctggggggaccaaggggctgtgagccctgtggctgccaccccacacacgccctgcac
cttgcctgtgacacagtgacagggcagtgccagtgccggcctggctttgggggtcgtgtc
tgttcccagtgccaggagcaccactggggagaccccgagcaggagtgccgagcctgtgag
tgtgagccgctgggtgctgagagcccacaatgcgagcaggacaacgggcagtgccggtgc
cgtctgggattcggggggctgcgctgtgaccgctgccagcggggctaccaggaacccttc
ccccactgcttgccctgccatccttgctttgggcgctgggacctggccgtgggcagcctg
cgggaagggctgcagcgccttggggcacaggtgcaggcactgagggagggggcgtccaca
ctcccactcagcccccgtcgcctgcgggagctggaggaggctctggggcatgtggaacgg
ctgctgggagagagggacagccctggtggtcccctcctcgatggactgcccaggcagctg
ggtggcaccaggatggagctggacaacttctggaagcacctccaagagctggagcaacac
ctagaccagctggcacaagcggatatgcagcaccatgaccggctagctgagctgagccgt
gagctgggaggtctcaaccaaaccacctcccaccttcaaacgctcctcggcacggtagcg
acagccggattcagcgagtcttaccgtagcatcctggcatcgatggaggcctcgcggcag
gcagaggtagcggccaacggcaccactggcgagctaagtagggcgcagatgacacggcag
gcagctgagcgggcgctgcggcagcggggcgatactttccgccgtggtacagccgcagcc
cgaaaatccttgcgggaggcacaaaaacgggtgatgggactcaacattgccaggatcaat
gagaagatttgcggggcacccggagaccagagctgcaagcacgcgccttgcggaggagcc
ttgtgccgagacagtgtggggacaaggcattgcggtggccctgggtgtgcgggggcactg
cctatctcagctcaagccctgagcagtgcccataatgcctcacagcagctggaggtggca
ttagagcagctgggtgttgtggcgcagaagatgcaggacgtgcaggagctggctcggggg
gcacgcagctgggcagaggaggcgctggagcgctctcaggccgcccgcagccgtgcagag
aaggcaacggcccagctgcgggacttcatccgtcggatcaaggccttcctggcagaggag
ggagctgacccaggcagcatcgagctggtggcccggcaggtgctgaacatctccctgccc
agcagccctggacagatccaggagctgctgcgggagatgcgggagagcatcagccagcta
gagggggtggacgcagttctcaacagcacagcggaggggctggctgtggcacgggatctg
ctggcacagggacaggaggccaggcaacgagcagaaggcataagggatgagctggcgggg
acacagcaggcacttgaggtggcacagacacaggtgatgacagcggggagcactctgcag
agcgccagggatgccatccaggtggctgagaagagagccaaggaggcggagcgcaggctg
caggtgctggacaggaaggagtcgcaggcgcagaggcggctgcaggaactggcacagcgc
atcaccgccctgcaggagcgtggccaggatgttcgccacacggcccagcaagccaaggat
agggctcagagtgccaccaccacctcagggacgcttagccaggacctggcacaggtaacg
cagcgttatgtgatgctgaagaatcgggtgggcacgctggacagggtgtctggtggggcc
ctgcagcgtgtgtcgcagctgatagcagaggcccaagacctcctggataaggccagcaac
agcaagaggaagctggaagacctggagcagcgctttggggccaatgaacagacgatggcg
gcaaaggtgacacgactgcaggctttggagcagcaggtcatcgggctgttgcaggagatc
cgggagagggccaatgcttacgccacctgctag
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