Hirundo rustica (Barn swallow): 120758528
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Entry
120758528 CDS
T09369
Symbol
MAP1A
Name
(RefSeq) microtubule-associated protein 1A isoform X1
KO
K10429
microtubule-associated protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120758528 (MAP1A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120758528 (MAP1A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120758528 (MAP1A)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120758528 (MAP1A)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120758528 (MAP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
120758528
NCBI-ProteinID:
XP_039932783
LinkDB
All DBs
Position
13:complement(20118516..20173365)
Genome browser
AA seq
3206 aa
AA seq
DB search
METAAGLVAMDTAAPPGGRRHALLAVIGEIGTEPERGALRGALERGIRSWNINTLYCDLN
HQLRLFVTRHLAQFSTEVKGQRTLHHRSDTLDTVILVNPNVDSIVSEVRSLVCDSSAHKL
LILCGQSSDQEGDLVLQTGTFTYQKFAEILSDPEVTQILSNSNSDTKASLTVSCLGEGAW
SNLGHPQFQDIINLKLNPDPVLPEMDGVSEFAEYVSETVDVPSPFDLLEPPTSGGFLKLS
KPCCYIFPGGRGDSALFAVNGFNILVDGGSERKSCFWKLVRHLDRIDSILLTHIGADNLP
GINGLLQRKVAEQEEEQSQGSTNYSDWMKNLISPELGVVFFNVPEKLKMPEASMKVKRSI
EEACMTLQYLNRLGIKSEPLYRVVSSTIEPITLFHKMGVGKLDMYILNPVKDSKEMQFLM
QKWAGNSKAKTGIILASGKEGEISVPYLTSITALVVWLPASPTEKIVRVLFPGNAPQNKI
LEGLEKLKHLDFLRYPVATQKDITSGIPPPLLKQTKIKQRTDSKESLKSSPKPSVTKQVK
KEEAVEEGIKEVKSEVVKDAKIEKKVKEHTEKVPEKPVKHEKIKTETTDALKAEKRKLAK
DKVGKKHLKEKVSKLEEKKDKEKKEIKKEKKDLKKDDGKKDEKKDSKKDDKKKENKSELK
KNSKPDLKPFTPEVRKTLYKAKLPGRLKTEKIKVKPEKEPEKVPADISKTLPMEKAPAQV
DPGETSVVEQRLVLSSPEDLTKDFEELKHEERGALQLTQELSDMEVSDKIMRAPEPEVKD
SVDMTGQSNLEVDLILKRKTPDHGVTTTDMEKESSAEEMAVPQWELKGGPAEKIEDERKA
IDENQDIKYWEGKAEQGKDIQVFPDKEHLPSHTGLLAKGAPPPVFREEEKEEEEKISLDR
KQRETETCGKFIEGTEAQEEDKKEKKEDVIEKAELEEKEEQHMNEEEKVEKNREFYGLNQ
NDREDKLFTITEKEREFSFMDEKTKLLGKDITKEESYLTSLPVPPGATAEHVSYIQDETI
PGYSETEQTISDEEIHDEQEERIPHLKYDVNSYNISVPDHPGSFEAVHGIQAMPPADLSA
KGYAGQESEILAYPTNIVAAPLAEEEHISSATSITECDKLSSFATSVAEDQSVASITAPQ
TEETGKSSLLLDTGNSMPSSRTEATQGLDYVPSAGTISPTSSLEEDKCFKSPPPEDFHAL
AEGERKLETQKKDLHEEVEDEEDEEDGTPNIEMPQKLRGHYNAPVFAPQGCPDNVIISVP
TQVMPLSTEEAPFSQADSAEAEERCMSPDDSTVKMASPTPSGPTSAGHTPFHQSPVEEKL
ETVDSDLFEKQTDAAAKKMEGQTSLVVKGAKGESLREDEASVAKSRHEREVSGPVQHELV
LSSDVPVPPEEEVQEEPVRREELPWLSYHKQETVVMGEDEEHPSTKPEKEQGAKTMTESL
TGFPKHLSFEPFATTGTSQGNVDLPQFTSQSKSKNDKSLRISPDGIKSPSFTEERIGKEK
SPDIPKRVTTEEGKLLYFTGDTSEEEKSSRVSIEDISPEETKSISLTESSSRKISSDVFI
KGISPEDIKALSFTEETSAKEKTMSNCTDKFSSEAVKSMGFADQSPATYEKSLEISAKEL
KEVSKSFPCPESSSVKDTSPRDSSTEEMSPDDSSLFSVSEKSLLKGRNADLDSQEVSPDA
KGLHFAESSPSEDKTSSHISTEGIKSCRFKEAQEKKSPEMEKFCMKDLSYEKKVWFPEEV
EEVPVQGRQQRYDKERESTFLDEAPELETKSLPKMGREENLSPAALGSHTWREAEKEAWA
SAFGYLQERRDSGRGGQLPSEEDEELNHAEDKPMLLQAEIECLKMESFDYKEDVQKGAKT
TSETKKVEVIPADITVPERTQREGSPLSPQYVLGEENQAKALTGNKKRQEFLLTSKQDCS
CLDDEEKTVLDSYAKSLHQVLTSPLSAVGKEIEAPPGAERPCKLDQCKPPLWEDVPSKMA
EKKSDISVLYQEVDCKYKSDSRQVDDCKSTEGLYDSTGRKEQTAAASTLLQSTRAAEYIA
ESTEGSAELSGQCAHSPPCQKSSDALGCAGAVGATIREVYPPETYSRSSPEPYSYEEEIC
TQRDDDSSIRQEPEEREPTPYPDERSFKYADIYEKIIVSGVGPSPFRAMGAHSPGHTDKV
PLTALNSQKGENFHVSAKEEESRLYTSAEKELSSPASPKDKVFDYRDTHERYLPLSETGK
PRTSEGQEKLNVSFALPGELDSALHPSSASAAFASPTVTTDIFYQGKTSTYSDAGCPDEN
IISSSQEQVSLSLKSEVPNPKDTYYEKAGRGEESASDSELEKGAKEKSEKESKLHSPAEA
EGTVYACISAVSKFPVSDPFLQSKCPEPLSPSSAASSPSGPGWQEEYESRTSAPAAVVET
YVAGYSDVPDMDRHERMSEMCHDSSQKREVAGKSTKESHFWVADYPSAAVASECQEQAIY
LKSASSKQTEVHKQGPRVESRGMDSSSGFESSLTGKSETASTFRHKQASASCLGDISLSL
ESPCALFSDQRNKDEYLEVSEKISTLDSSFPKFSPLSPFEGDTVLSKGMEKESVTQQPLK
DDSPSLSEEPSSEATTPVILTTVESFYSHMLSTYTSAGVEAGTRSAWDISPQVPDNAVKI
HTAETKDFVFAEEHGSPFHCGMGDHTLPCRKECQGSEPTPFCAEQEQQHCGSSPEQKAPF
AEQPFPLTSLPDVLTSFSHCQHEDETTANGPTEVSTSLPAFQSTYHAAEAKVEKTCPDSD
GSFSPRAGKEETEKQSRPSSLMSPENSFQPFFPDVQRGEKTDDCGDASHDVETHLGGSSD
CGQKFSSCEYKQRKGELSPSFINPSPHELSEDSDLSQEEGHPSVQGRPPHPVSSPMQNAT
VEETPPTSVSDSGTSQSDSDVPPETEECPSITADANMDSDEDADFLPVDKAVGIAHHASS
RSSHDPQPVPMVDPHPHPPHPDVCMVDPDMLLNEQSMSRTDKISKKDVKEKNKGVRKPLS
KPKSSSPARKLDVKGKRSPTPVKQSSDKSPKSVTAKKERDGGEKPKPRSALMPEDELSRS
SHSNPGKSLVNGIKTNPASNSPKSSLSVPMGPPVYVDLAYIPNHCSGKNTDPEFFKRVRA
SYYVVSGNDAANGEPSRAVLDALLEGKSQWGENLQVTLIPTHDTEVTREWYQQTHEKQQE
LNIMVLASSSTVVMQDESFPACKIEF
NT seq
9621 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcggctgggctggtcgccatggacacggcggcgccgccgggcggtcggcgg
cacgcgctgctcgccgtgatcggggagatcgggacggagccggagcggggcgcgctgcgc
ggcgccctggagcgcggaattcgttcctggaacattaatactctgtactgtgatctgaat
catcaactgcggctctttgtaacccgacatctggctcagttttctactgaagtcaaaggc
caaagaactctccatcaccggagtgacaccctggatacggtgatcctggtaaatcctaat
gtggacagcatcgtgtctgaggtccgctcacttgtgtgtgattcatcagcccacaaacta
ctgatcctctgtggtcagagctcagaccaggaaggagacttggtcctgcagacaggcacc
ttcacttaccagaagtttgctgagatactttcagacccagaggtcacccagattctcagc
aactctaattcagataccaaggcatctcttactgtgtcgtgcctgggagaaggagcttgg
agcaaccttggtcatcctcaatttcaggacattattaatctgaaactgaatcctgatcca
gttctgccagaaatggatggggtgtctgaatttgcagaatatgtctctgagacagttgat
gtgccatctccatttgatctcctggagccaccgacctcaggaggttttctgaagctttct
aagccctgctgctacatattccctggaggaagaggtgattctgctctctttgctgtcaat
gggtttaacatccttgtggatggtggctctgagaggaaatcctgcttctggaagctggta
aggcacctggataggattgattcaatcctgctcacccacattggtgcagacaacctgccc
ggtatcaatgggctgctgcagaggaaagttgctgagcaagaggaggagcaatcccagggc
tctaccaactacagtgactggatgaagaacctaatttctcctgagctaggggtggttttt
tttaatgttcctgaaaagctgaagatgcctgaagcctccatgaaagtaaagaggagcatc
gaagaagcgtgtatgacactgcagtatctcaacagactgggcattaaatcagagcctctc
tacagggtggtgagcagcaccatcgagcccatcacactcttccacaaaatgggagtgggt
aagctggacatgtatatactgaaccctgtcaaggacagtaaagaaatgcagtttctaatg
cagaaatgggctggcaatagtaaagcaaaaactggcatcattcttgcaagtgggaaagaa
ggtgaaatttctgttccctatctcacatctatcacagccctggtggtatggctaccagcc
agcccaacagaaaaaattgtaagggttttgtttcctggaaatgctcctcaaaataagata
ctggaaggtcttgagaaactcaagcacctggattttctgagatacccagtagctactcag
aaagatatcacttctggaatacctccacctctgctgaagcagaccaaaattaaacaaaga
actgacagtaaagagagtcttaagtcttcccccaagccatctgtgacaaagcaagtcaag
aaagaagaagcagtagaggaggggattaaggaagtaaaatcagaagttgtaaaggatgct
aaaattgagaaaaaggttaaagagcacacagagaaagttcccgagaaacctgttaaacat
gaaaagataaagacagaaacaactgatgctctcaaagcggagaaaagaaaattggcaaaa
gacaaggttggaaaaaagcatctcaaagagaaagtatccaaattagaggagaagaaagac
aaagaaaaaaaagagattaagaaggagaaaaaggacttaaaaaaagacgatggaaagaaa
gatgagaaaaaagattcaaagaaagatgataaaaagaaagaaaacaagtcagagctcaaa
aaaaattctaaaccagacttgaaaccatttaccccagaagtaagaaaaacattgtacaag
gcaaaacttccaggcagactcaaaactgagaagatcaaagtaaaacctgaaaaagaacct
gaaaaggtacctgctgacattagcaagacattaccaatggagaaggcacctgcacaagtg
gatccaggagagacatccgtagtggaacagaggttagtcctgtcttcaccagaagatctt
acaaaggactttgaggaactgaagcatgaggagagaggggccttgcagttgactcaagaa
ctctctgatatggaggttagtgataagattatgagagcacctgaaccagaggtaaaagac
tctgttgatatgactggtcagagtaaccttgaagtggatctgattttaaaaagaaagacc
cctgatcatggagtaactactactgatatggaaaaagaatcatcagcagaggaaatggca
gtccctcagtgggagctgaagggaggtcctgctgaaaaaatagaggatgaaagaaaagca
atagatgaaaaccaggacataaaatactgggagggaaaagctgagcagggcaaggacatt
caggtgtttcctgacaaagaacacctgccatcacatacaggcctcttggcaaagggtgct
ccgccaccagtgttcagagaggaggaaaaggaggaagaggagaaaatctctttggacaga
aaacagagggaaacagaaacttgtggaaagtttattgaggggacagaggcacaggaagag
gataagaaggaaaagaaagaagatgtgatagaaaaggcagaactggaagaaaaggaagaa
cagcacatgaacgaagaggagaaagtagagaagaatagagaattctacgggctgaatcag
aatgacagggaggacaaactgtttacgattacagagaaggaaagagaatttagtttcatg
gatgagaaaaccaagttacttggaaaggacataacaaaggaagagtcatatctgaccagc
ctgccagtcccacctggagcaacagcagaacatgtttcctatatccaagatgaaactatc
cctggctactcagaaacagagcagaccatttctgatgaagaaatacacgatgaacaggaa
gagaggatcccacacttgaagtatgatgtcaattcctataacatttctgttcctgaccat
ccaggctcttttgaagcagtacatggaatacaggccatgcctcctgctgacctttcagcc
aagggctatgctggccaggagtccgaaatcctggcatatcctacaaacattgtggcagca
cctctagctgaggaggagcacatatcttctgctacctccattactgaatgtgacaagctt
tcatcttttgcaacgtcagtagcagaggatcaatctgttgcatccataacagcaccacaa
acagaagagactgggaaaagctctttacttttggacacaggaaacagtatgccctcctct
cggactgaagcaacccaaggtcttgactatgttccctctgctggcacaatttctcccaca
tcatccttggaggaagacaaatgctttaaatctccaccccctgaagatttccatgcatta
gcagagggagagaggaaactggaaactcaaaaaaaggaccttcatgaggaggtagaagat
gaagaagatgaagaagatgggactccaaatattgagatgcctcagaaactcagagggcat
tacaatgccccggtgtttgctcctcaaggatgccctgataacgtgataatcagtgttccc
acacaggtgatgcctttatccactgaagaagcaccattttcccaggctgactctgcagag
gctgaagaacgatgcatgagtcctgatgacagcacagtcaaaatggcctctcccactcca
tctggccccaccagtgcagggcacacacccttccaccagtctccagtggaggaaaagctg
gaaacagtagattcagatctatttgaaaaacaaacggatgctgctgccaagaaaatggaa
ggccaaacttctcttgtggtgaagggagccaagggtgaatctctcagagaagatgaggca
tctgtggctaaatccagacatgaaagagaagtgtctggacctgtgcagcatgaactggtt
ttgagcagtgatgttccagtgcctcctgaggaggaggtacaggaagaaccagtgaggagg
gaggagctgccctggctttcttaccacaagcaggagacagtggtgatgggggaggatgag
gagcatcccagcacaaaaccagaaaaagagcaaggagctaaaaccatgacagagagttta
acaggatttccaaaacacttgtcctttgagccatttgcaaccacaggaacatctcaagga
aatgtggatcttccacagttcacaagccaaagcaaatctaaaaatgacaaatctttgcga
atttcaccagatggcatcaaatcaccttcttttacagaagaaaggattggtaaagaaaaa
tccccagatattccaaagagagttactactgaagaaggaaaactgctgtatttcacagga
gacacctcagaagaagagaaatcttctcgtgtttccattgaagatatttccccagaagag
accaaatccatttctctcactgagagttccagcagaaaaatatcttcagatgtttttatt
aaaggaatttccccagaagacatcaaagctcttagtttcacagaagagacatctgcaaaa
gaaaaaactatgtcaaactgcactgacaaattctcttcagaagctgtgaaatccatgggt
ttcgcagaccagagcccagctacatatgaaaaatcactggaaatttctgccaaagaacta
aaagaagtatcaaaatcttttccttgcccagaaagcagttcagttaaagacacgtcaccc
agagattcttcaactgaagaaatgtctccagatgacagcagtttattttctgtatcagaa
aagagcctattgaagggaagaaatgcagacttggactctcaggaagtatccccagatgca
aagggcttacattttgcagaatctagcccaagtgaagataaaacatcttcacacatttct
actgagggtataaaatcttgcaggttcaaggaagctcaagaaaaaaaatctccagaaatg
gaaaagttttgcatgaaagatctaagttatgagaagaaagtgtggtttccagaagaggta
gaagaggtccctgtccagggaaggcagcagagatatgacaaagagagggagagtacattc
ttggatgaagcaccagaattggaaacaaaatcccttcctaaaatgggaagggaggagaac
ctgtcccctgcagcgcttggcagccatacctggagagaagcagaaaaggaagcatgggct
tctgcctttgggtatcttcaggaaaggagagacagtgggagaggagggcagttacccagt
gaggaagatgaggagcttaaccatgctgaagacaaacccatgctactgcaagcagaaatt
gaatgtttaaagatggagtcatttgattacaaagaagacgtgcagaagggggccaaaact
acgtcagaaacaaagaaagtagaggtaattcctgctgacatcactgtcccagaaagaaca
caaagggaaggttctcctctatctcctcagtatgtccttggtgaagaaaaccaggccaaa
gctttaactggaaataaaaaaaggcaagaattcttgttgacctctaaacaagattgctcc
tgcttagatgatgaggagaaaactgtcctagatagctatgcaaagtcactacaccaagtt
ctgacgtctcccctgtctgcagtgggaaaggagattgaggcaccaccaggagcagagagg
ccctgcaagttagatcagtgcaagccacctttgtgggaggatgtcccatcgaagatggct
gagaagaaatcagacatcagtgttttgtatcaggaagtagattgcaaatacaagtcagat
agcaggcaagtggatgactgcaaatccaccgagggtctgtatgactctacaggaagaaaa
gagcagacagcagcagcatctactctgttgcaatctacgagagcagcagaatatattgct
gagtccacagaagggagtgctgagctgtcagggcagtgtgcacactcccctccatgtcaa
aaaagtagtgatgctctgggttgtgctggggctgtgggtgctaccatccgagaggtgtat
cctccagagacctattccaggagttcccctgagccttattcctatgaggaagagatctgc
acacagagagatgatgacagttccataaggcaagagccagaagaaagagaaccaactccc
taccccgatgaaagaagtttcaagtatgctgacatctatgagaagataattgtgtctgga
gtgggaccctcccccttcagagccatgggtgcacacagcccaggtcacactgataaggtc
ccactgacagcactgaactctcaaaaaggtgaaaattttcatgtgtctgcaaaggaagaa
gagtcccgcctttatacctctgctgagaaggaattgtcatctccagcatcccctaaggat
aaagtctttgactacagagacacccatgaaagatatttgcccttgtctgaaacagggaag
cctaggacatcagaaggacaggagaaactgaatgtgtcttttgctttgccaggagaactg
gactctgcactgcacccatcatctgcgagcgcagcatttgcctctcccaccgtcacaact
gacatcttttatcaaggaaaaacatccacctatagtgatgctggttgtccagatgagaac
ataatttcgtctagccaggagcaggtatctttgtccctgaaatctgaagtcccaaatccc
aaagatacatactatgagaaagcaggtcgaggggaagaaagtgcaagtgactcagagcta
gaaaaaggtgctaaggagaagtctgaaaaggagtctaaactgcacagccctgctgaagct
gaaggcactgtctatgcatgcatctcagctgtcagcaagttccctgtctcagatcccttc
ctgcagagcaaatgtccggagcccctttcacccagctctgctgcctcttctccttctggt
ccaggctggcaagaggaatatgaaagtaggacatctgcaccagctgctgttgtggagaca
tatgttgctggttacagtgatgtgccagacatggacagacatgagcgaatgtcagaaatg
tgccatgattcttcacaaaagagagaggttgctgggaaatccacgaaggaatcccatttc
tgggtagcagattatccaagtgcagctgtggcctccgagtgccaagagcaagccatatac
ctgaagtctgcttccagcaaacaaacagaggtccacaaacagggcccgagagtagagagc
agagggatggatagctcttctggatttgaaagttccctgacaggaaaaagcgaaacagcc
agcacattcagacataagcaagcctcagcaagctgtttaggggatatttctctttcttta
gagtctccttgtgctttgttctcagaccagcgaaacaaagatgaatacttggaggtttct
gagaaaatcagcacccttgactcatcttttcctaaattctcaccgctgagtccatttgaa
ggagacacggtgttgtccaaaggtatggagaaagagtctgtgacccagcagccgctgaaa
gatgactctcccagcctttcagaggaaccttcatctgaagccaccactcctgtgatactg
actacagtagaaagtttctattcccatatgctttccacatacaccagtgcaggagtggaa
gcaggtaccaggagtgcttgggatatatctccacaggttccagataatgctgtgaaaata
catacagctgaaaccaaagactttgtctttgctgaagaacatggatctccatttcactgt
ggcatgggtgaccacaccttaccatgcagaaaagagtgccagggctcagagcccacacca
ttctgtgcagagcaagagcagcagcactgtggtagcagcccagagcagaaggcaccattt
gcagagcagccgttcccattgacatctctccctgatgtgttgacatcattttctcattgt
cagcacgaagatgaaaccacagccaatggtccaacagaggtgagcaccagtctgccagcc
ttccaaagcacataccatgcagcagaggcaaaagttgaaaaaacatgtcccgattctgac
ggcagtttttctccgcgcgcaggcaaagaggaaacagagaagcaaagccgtccttcctct
ctgatgtcccctgaaaacagtttccagccatttttcccagatgtgcagaggggtgagaaa
acagatgactgtggagatgcttcccatgacgtggagacccatttaggaggcagttctgat
tgtggacagaaattttcttcatgtgaatacaagcagagaaagggagaactctctccctca
ttcatcaacccaagcccccatgagctctctgaagacagtgacctctcacaggaggagggt
cacccttcagtgcaggggagaccaccccaccctgtgagcagtcccatgcaaaatgccaca
gtggaggaaacccctccaacatcagtgagtgattctggaacctcccagtcagactccgat
gtcccgcctgagactgaagaatgtccatccatcacagcagatgccaacatggactcggat
gaagatgctgatttcctcccagtggacaaagctgtggggattgctcatcatgccagttct
aggtccagccatgatcctcagcctgttccaatggtagatccccatccccaccctcctcac
cctgatgtctgcatggtagaccctgatatgttgttaaatgagcaaagcatgagcagaact
gataaaatttctaagaaagatgtaaaagaaaagaacaaaggtgtgaggaagcctttgagc
aaacccaaatcttcctcccctgcccggaaattagatgtgaaagggaaacgatcacccact
cctgtgaaacagtcatcggacaaatctccaaaatctgtcactgccaaaaaagaaagagat
ggaggagaaaagcccaaaccacgtagcgcactgatgccagaggatgagttatcccggagt
agtcacagcaaccctggcaagagccttgttaatggcatcaaaacaaatcccgcttccaat
agtcctaagagcagtttgtctgtgcctatgggtccacccgtctatgtggacttggcctac
atccccaaccactgcagtgggaagaacacagatccagagttcttcaagcgggttcgagca
tcttactatgttgtgagtgggaatgatgcagccaacggagagccaagccgtgcagtgctg
gatgcacttttggaagggaagtctcagtggggagagaacctgcaggtgacattgatccca
acacacgatactgaggtaacacgagaatggtatcaacagacccatgagaaacagcaggag
ctaaacatcatggtactggcaagcagcagcactgttgtgatgcaggacgaatcttttcca
gcctgtaagattgaattctaa
DBGET
integrated database retrieval system
