Hirundo rustica (Barn swallow): 120758537
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Entry
120758537 CDS
T09369
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
hrt
Hirundo rustica (Barn swallow)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120758537
NCBI-ProteinID:
XP_039932812
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Position
13:9208414..9418783
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AA seq
1088 aa
AA seq
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MRLPALCALVTLLSLSRCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEVPKSEVIPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAE
SEEDRRVISLQLDRDHHALFVAFSSCVVRIPLSRCERHGSCKKACIASRDPYCGWLDHEA
CGRVTPGMLFSLFVSYNHSTGGYVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
EFSSASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKAHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHIDHPLTKSSSKRDHRRSVDSRNTLNDFLKH
LNETTNNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTA
GTKMDYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcccggcgctctgtgccttggtgacgctgctgagcctgtcccgctgccgggct
gtcagcttccccgaagacgaggaccccattaacgttgtggactatcactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctaatgttgaaaattcgagacacactttatatcgctggcagggaccaggtttacactgta
aacttaaatgaagttccaaaatcagaagttatcccaagcaagaaattaacatggagatca
aagcagcaggacagagagaactgtgctatgaaaggcaaacataaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcggttgaatacattagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcggcaacagtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggggatggatctgccttaagaacaataaagtatgactccaaatggataaaagaa
ccacacttcctccatgccatagaatatgggaactacgtttatttcttcttccgagagatt
gctgtcgagcacaacactttaggcaaggctgtgtattcccgtgtggcacgcatctgcaaa
aatgacatggggggctcccaaagggtcctggaaaagcactggacatccttcctgaaagct
cggctcaactgctcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggagtgcccactgtagtgggtgtgttcaccacacagctc
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaggtcttc
aaagggagatttaaagaacaaaagactcctgactctgtttggacagctgtacctgaagac
aaagtaccaaagccaagacctggctgctgtgcaaaacacggcctagcagaggcttacaaa
acctccattgatttcccagacgaaacgctctccttcatcaagtctcatcctttgatggac
tcagctgttccctcagtcactgaggagccctggtttaccaaaacacgtgtcagatacaga
ttgacagcaattgctgtagaccacgctgctggaccctaccagaactacacagtcatattt
gttggctccgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcatattactggaagagattgaagcatataatcatgcaaagtgtaatgcagaa
agcgaggaggacagaagagtcatttccctccagctggacagagaccaccatgctctgttc
gtggcgttctccagctgcgtcgttagaattcccctgagtcggtgtgagcgtcacgggtca
tgtaaaaaggcatgtattgcttcacgggacccgtactgtggctggctagaccatgaggcg
tgtggaagagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcact
ggaggatatgtgcaagatgtcgaatatggcaacacggcacagcttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggcgacccaacatctgacatg
gagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtgaggtgggaagta
caatcaggagagtccaaccaaatggtacatatgaatgtcctaatcacttgtgtctttgcc
gcttttgtcctgggagcctttattgcgggagtggctgtttactgttaccgggatatattt
gtacggaagtccaggaaaatacacaaagatgcagaatcggctcagtcctgcacggactcc
agtgggagctttgccaaactcaatgggctttttgacagtcctgtcaaggagtatcagcag
aacattgattcacccaaactgtacacaaacctgctgaccagcagaaaggagttgcctcca
aacggtgataccaagtccatgatgatggaccacagaggacagcctccagaattagctgca
cttccaactcctgaatctacaccagttcttcaacagaagactctgcaggctatgaaaagt
cagtcggacaaagcacacggcaacctcaatgcttcacgaaaggaaaccccactaaaaagc
cctcagttttttccttctagtcctccgccccactctcctctaagtcatggacatattccc
agcgctattgttcttcccaatgctacccatgactacaacacatctttctcaaattctaat
gcgcacaaggcagacaaaaagatgcaacacattgatcatccacttacaaaatcatccagc
aaaagagaccacaggagatctgttgattccaggaacaccctgaatgattttctgaaacac
ttaaatgaaactactaataatcccaaagcaattatgggagatattcaagtggcccaccag
actttaatgctggatccaatgggcaatatgtctgagatcccacctaaagttcccaacagg
gaggcatctttatactctcctccatcgactctgccaagaaacagtcccacaaaacgagtg
gacgtccctaccactcctgcagtaccaatgacctctttggaaaggcagaggggttatcac
aaaaattcttcacagaggcactcaatatctgcccttcctaaaaacttgaactcaccaaat
ggtgttttgttatccagacagccaagtattaatcgtggggggtacatggctcccacggca
ggcacaaagatggactacatgcaagggacgcctgtcagcgttcacctccagccttccttg
tccaggcaaagcagctacacgagcaatggcaccctgcctcgtacaggaataaagaggaca
ccctccctaaaacccgacgtgccaccaaaaccctcgttcgtccctcagacaacatcagtc
agaccactgaacaaatacagctactag
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