Hirundo rustica (Barn swallow): 120758556
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Entry
120758556 CDS
T09369
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120758556 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120758556 (MYO5C)
04131 Membrane trafficking [BR:
hrt04131
]
120758556 (MYO5C)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120758556 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120758556 (MYO5C)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120758556 (MYO5C)
mRNA cycle factors
P-body specific factors
120758556 (MYO5C)
Membrane trafficking [BR:
hrt04131
]
Others
Actin-binding proteins
Myosins
120758556 (MYO5C)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120758556 (MYO5C)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120758556 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Csm1_N
Rnk_N
Motif
Other DBs
NCBI-GeneID:
120758556
NCBI-ProteinID:
XP_039932854
LinkDB
All DBs
Position
13:8303022..8335805
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTSETVLKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKKHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSVSPF
SSTINIKSARPALKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELAINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACILIQKCVRGWLQRKRFLSVR
RAAVTVQQYFRGQRTVRQAITARNLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMLEEQKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTSLASAHMNDVDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMMLEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEITIQDSLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTMKLKEMSNRLHYELERDRTQRRYT
EAQNEVDIKEKESLKDTIQEIEGLSNGVMQDEVPDEVQSKIEQMTSRLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKAEAHAPTVPKEYIGMMEYKKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNATIDGIKQVVKEHSEDFEMMSFWLS
NTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSEYRQILSDLAIRIYHQFIIVMEN
NIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCSSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
caattagaagatggaactgagctgagttaccctgttgatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcactcagttatctccacgaa
cctgctgttctacacaatcttaaaattcgttttgtggagtctaagcttatctacacatat
agtggaataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatatagtgggcagaacatgggggacatggatccacacatttttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtcaattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtatactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtattggcatccaatccaata
actgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcgatttgggaaa
tacactgaaatcagttttgaccggagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcaattgtgtgcatctgctatgcaacctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagataaacatctgagtatattctgtgag
cttctggatttaaactgtgacaaaatggcccggtggctgtgccaccgaaagattgtcacc
acctctgagacggtgctaaagccaatgaccagggcccaggctgtcaacgccagggacgct
ctggcaaagaagatctactctcatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaaaaaacacacttttattggtgtcttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaatctgcacgtcttcaaacttgaacaagaagaatatatgaaggaagatatt
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttatcgaagctaaa
atgggaattttagaacttctggatgaagagtgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaatgcgctctttgaaaagccaaga
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgcgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccggtgtccgtttcacctttc
agttcaaccataaacatcaaatctgccagacctgctctgaaatcacccaacaaacagctc
cggacgactgtgggcagtaagttccggaattctttgtctttgcttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaacgatgagaaattgccttttgag
tttgattccaaaagagttgctcagcagctgcgagcatgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgctacagc
attctaatgacacagcaggaactcgccataaatgacaagaagcagatttgcaagattgtt
ttgcagcggctgatccaggatcataaccaatatcagtttgggagaacaaaaatttttttc
agagcgggacaggttgcttacttagagaaactgcgctcagacaagctgaggcacgcgtgc
atcctgatccagaagtgtgtccggggctggctgcagcggaagaggttcctgagcgtgagg
agagcggcggtcacagtgcagcagtacttccgcgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaagcaaacatgggcagctatcattattcagaaatactgtcggggt
tacctcgtgcgtaggctttgccagctcatccacgtggctgctgtaacaatacaagcttac
acaagaggatttctagcaagaaaaaagtatcggaagatgcttgaagagcagaaggctgtg
atcctccagaaatatgcccgtgcatggcttgccaggcgcagattccagaacattcggcgc
tttgtgttgaatatccagctttcatacagagttcaacaactgcagaaaaagatagaagaa
cagagtagagaaaatcatggtttgctggaacgattgaccagtctggcttcagctcatatg
aatgacgtggatacaattcagaagcttgaatcagaactcgaaaaattaactgctcaaaag
agaacatatgaagagaaagggaaaaaatataaagaggatagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttggaaataaaactccaa
gagaaaactgaggaaatgaaagagaaaatggatgacctcacacagcagctcttcaatgat
gtacagaaagaagaaaaccagcgaatgatgctggagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctaaaagaggaaaaa
actcagctacagcaacaaattcagcaagaaattaccattcaggatagcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaataccagaattgcaaaaggaaatcgagctg
cttcagacacagaaattggatgttgaaaagcaggcccactcacagaagcgagaattgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagttatgattttgaagacgtaaga
agcaggctctctacagaggatctggagcacttaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaggaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatctcagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaatgatggcattcggcttgaa
gtgagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
ctcgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagaccatgaagttgaaa
gaaatgtcaaatcgactgcattatgagctagaacgggataggacacaaagacgatatact
gaggcccagaatgaagtagacataaaagaaaaagagagtctgaaggacacaatccaagaa
attgaggggctgagcaatggtgtgatgcaagatgaagtcccggatgaagtacaaagcaag
atagagcaaatgacatctcgacttgctgtggaaaacatggatcttgaagaaaagctggac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctaaccaaaactatt
gaaaaagctgaagcccatgcgcccactgtgcccaaagagtacatcggaatgatggagtac
aagaaagaggatgaagaaaggatcattcaaaatctgatccttgatttaaagccccgtgga
gttgtagttaatatgatacctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaatgatgctgacatgctgaagtctttcatgaatgcaaccattgatggc
atcaaacaggttgttaaggaacattcagaagactttgagatgatgtccttttggctttcc
aatacatattactttcttaactgtttgaagcagtacagcggggaagaggaattcatgaag
tataacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattctcagtgatttggccattcgaatatatcaccaattcattattgtaatggagaac
aatatccagcacatgattgtaccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcttgaaacctacggggttccgtaaacgttcttccagtatagatgacaccgatacctac
actatgacctctatcctgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactccgagctcctaaagcaggcagtgaagcagcttttctttctgattggagctgtc
accctcaacagtctcttcctccgcaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggctgaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatctgtgaacactgctcatctctctctactgtgcagata
gttaagatcctgaactcatacactccgatagatgactttgagaaaagagtgactccatca
tttgttcgaaaagtccaggctatgctaaacaaccgtgaggatgttccccagctgatgctt
gataccaagcatctctttcaagtgacgtttcctttcaccccctctccacatgctttggaa
ctgatacaagtccccagcagcttcaaacttggctttctcacgagggtttaa
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integrated database retrieval system
